Selected Sequences:   130 /Selected Residues:     437
    Deleted Sequences:      0 /Deleted Residues:     2072

    Gaps Scores:           =0=   <.001  <.050  <.100  <.150  <.200  <.250  <.350  <.500  <.750  <1.00   =1=  

                                 10        20        30        40        50        60        70        80        90       100       110       120
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    Glyma13g22710.1_GLYM ---------------------MFLLRVHSVEEDHPLD-----------------------------------------------------------------------------------
    MA_10428609g0020_PIC ------------------------------------------------------------------------------------------------------------------------
    supercontig_46.26_CA ---------------------MFILRLHSVDTDHLVT-----------------------------------------------------------------------------------
    Glyma09g17743.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g015431m_CI ------------------------------------------------------------------------------------------------------------------------
    MDP0000210436_MALDO  ------------------------------------------------------------------------------------------------------------------------
    MA_508435g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    Medtr2g104600.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Potri.005G110500.1_P ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1001828 ---------------------MFVLRIQSVDFPAASA-----------------------------------------------------------------------------------
    C.cajan_29736_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    MA_2413g0010_PICAB   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006182m_M ------------------------------------------------------------------------------------------------------------------------
    Ostta4_34845_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Tc02_g010060_THECC   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.790.r2.a ---------------------MFLLRVHSVEADHPLD-----------------------------------------------------------------------------------
    MDP0000313787_MALDO  ---------------------MFILRVHSVDTNHPLS-----------------------------------------------------------------------------------
    MA_28767g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    supercontig_10.127_C ------------------------------------------------------------------------------------------------------------------------
    28152.m000902_RICCO  ------------------------------------------------------------------------------------------------------------------------
    C.cajan_02948_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G066169_P03_ZE ---------------------MFVLRIQSVDFPDAAV-----------------------------------------------------------------------------------
    MA_85047g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Gorai.009G125800.1_G ------------------------------------------------------------------------------------------------------------------------
    MDP0000304270_MALDO  ---------------------MLVGEVYPTPIDHGATPDPALEEVLTVTGEHDQSNAEDISETFVKYVKSNDWDNVIKFLRQHRKLAGNAKIPFVVQHDHFKNGTVLHYAILNIMSCIVR
    Phvul.002G052300.1_P ------------------------------------------------------------------------------------------------------------------------
    selmo_89370_SELMO    ------------------------------------------------------------------------------------------------------------------------
    Sb04g005670.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01015569001_VI ---------------------MFALRVHSVDDNHPLS-----------------------------------------------------------------------------------
    orange1.1g015426m_CI ------------------------------------------------------------------------------------------------------------------------
    selmo_403400_SELMO   ---------------------MFSVKVHEI------------------------------------------------------------------------------------------
    Ca_06690_CICAR       ---------------------MFFLRVHSVDAESPVD-----------------------------------------------------------------------------------
    Gorai.001G043700.1_G ---------------------MFILRVHSVDTELPLT-----------------------------------------------------------------------------------
    GSVIVT01029385001_VI ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01013625001_VI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g016340m_CI ---------------------M--------------------------------------------------------------------------------------------------
    Solyc03g120000.2.1_S ------------------------------------------------------------------------------------------------------------------------
    Medtr5g005150.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Potri.007G063900.1_P ------------------------------------------------------------------------------------------------------------------------
    Gorai.005G232800.1_G ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G005205_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G041561_P01_ZE ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_008621m_M ---------------------MFILRVHSVDVDHPLA-----------------------------------------------------------------------------------
    cassava4.1_033258m_M ------------------------------------------------------------------------------------------------------------------------
    CMK309C_CYAME        ---------------------MLLLVVEVVYGKGRSL-----------------------------------------------------------------------------------
    MDP0000335450_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Phvul.003G167400.1_P ---------------------MFLLRVHSVDADHPLD-----------------------------------------------------------------------------------
    AK251438.1_HORVU     ---------------------MFSLRVQSVDLPDALA-----------------------------------------------------------------------------------
    Phvul.005G181500.1_P ------------------------------------------------------------------------------------------------------------------------
    orange1.1g011525m_CI ---------------------MFVLRVHSVDDNHPIT-----------------------------------------------------------------------------------
    GSMUA_Achr3P13360_00 ------------------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 ---------------------MFTLSIHSVEIP---------------------------------------------------------------------------------------
    Pp1s40_296V6.1_PHYPA ---------------------MFSLKVHALEHPSKEA-----------------------------------------------------------------------------------
    Ca_02909_CICAR       ------------------------------------------------------------------------------------------------------------------------
    Tc00_g032110_THECC   ------------------------------------------------------------------------------------------------------------------------
    Cc02_g19690_COFCA    ------------------------------------------------------------------------------------------------------------------------
    MDP0000266286_MALDO  ---------------------MFILRVHSVDTNHPLS-----------------------------------------------------------------------------------
    EG4P66601_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Solyc07g008050.2.1_S MRMEEYLRNIIPNLNSLPKNAMFTLQIHTVDSPQPIP-----------------------------------------------------------------------------------
    Cucsa.132280.1_CUCSA ---------------------MFFLQVHTVDNDHPLT-----------------------------------------------------------------------------------
    Pp1s14_283V6.1_PHYPA ------------------------------------------------------------------------------------------------------------------------
    EG4P15130_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    orange1.1g018432m_CI ---------------------MFVLRVHSVDDNHPIT-----------------------------------------------------------------------------------
    Ostta4_35565_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Os02g09060.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400053855 ---------------------MFTLQIHTVDSPQPIP-----------------------------------------------------------------------------------
    27446.m000481_RICCO  ------------------------------------------------------------------------------------------------------------------------
    Potri.009G090100.1_P ------------------------------------------------------------------------------------------------------------------------
    PDK_30s766901g002_PH ------------------------------------------------------------------------------------------------------------------------
    29927.m000605_RICCO  ---------------------MFILRVHSVDTDHPLT-----------------------------------------------------------------------------------
    AT2G42160.1_ARATH    ---------------------MFILRVHSVDSERPIS-----------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    MA_494524g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    MA_79946g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1001547 ------------------------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P30140_00 ------------------------------------------------------------------------------------------------------------------------
    orange1.1g019425m_CI ---------------------MFVLRVHSVDDNHPIT-----------------------------------------------------------------------------------
    Glyma15g00770.2_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g014500m_CI ---------------------MFVLRVHSVDDNHPIT-----------------------------------------------------------------------------------
    Sb06g030620.1_SORBI  ---------------------MFVLRIQSVDFPDAAA-----------------------------------------------------------------------------------
    PDK_30s709101g009_PH ---------------------MFSLRIHSVDSPHHHL-----------------------------------------------------------------------------------
    GRMZM5G896756_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    Os12g32374.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_018065m_M ------------------------------------------------------------------------------------------------------------------------
    Bradi3g06180.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400009626 ------------------------------------------------------------------------------------------------------------------------
    Solyc10g049650.1.1_S ------------------------------------------------------------------------------------------------------------------------
    Glyma07g14551.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g014488m_CI ---------------------MFVLRVHSVDDNHPIT-----------------------------------------------------------------------------------
    Bradi4g06630.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    C.cajan_01900_CAJCA  ---------------------MFLLRVHSVDADHPLH-----------------------------------------------------------------------------------
    GSVIVT01037858001_VI ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400009872 ------------------------------------------------------------------------------------------------------------------------
    C.cajan_21844_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    ITC1587_Bchr3_P06352 ------------------------------------------------------------------------------------------------------------------------
    Glyma01g45400.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Bradi5g23970.1_BRADI ---------------------MFSLRIHSVEFPDAIA-----------------------------------------------------------------------------------
    chr1.CM0088.530.r2.d ------------------------------------------------------------------------------------------------------------------------
    Sb08g016307.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    Os04g55480.1_ORYSA   ---------------------MFSLLIQSVDFTDDAA-----------------------------------------------------------------------------------
    EG4P66602_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1002888 ------------------------------------------------------------------------------------------------------------------------
    supercontig_106.73_C ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006523m_M ---------------------MFILRVHSVDVDHPLA-----------------------------------------------------------------------------------
    Medtr4g114970.1_MEDT ---------------------MFFLRVHSVDAENPLD-----------------------------------------------------------------------------------
    orange1.1g023654m_CI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g032009m_CI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomP ---------------------MFSVRIHSLDAPH--------------------------------------------------------------------------------------
    Cc06_g08180_COFCA    ---------------------MFTLQIHSVDSPQRLP-----------------------------------------------------------------------------------
    MDP0000279102_MALDO  ---------------------MFILRVHSVDTNHPLS-----------------------------------------------------------------------------------
    selmo_227454_SELMO   ---------------------MFSLRVFLEGEEKPRC-----------------------------------------------------------------------------------
    Cucsa.105760.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    MLOC_18786.1_HORVU   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.800.r2.a ------------------------------------------------------------------------------------------------------------------------
    MDP0000191872_MALDO  ------------------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando ---------------------MFSVRIHSLDTPH--------------------------------------------------------------------------------------
    LjSGA_019478.1_LOTJA ------------------------------------------------------------------------------------------------------------------------
    Ostta4_38022_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Cc11_g03280_COFCA    ------------------------------------------------------------------------------------------------------------------------
    AT2G14830.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    Glyma17g12120.1_GLYM ---------------------MFLLRVHSVEEEHPLD-----------------------------------------------------------------------------------
    Potri.018G128100.1_P ---------------------MFSLRVHSVDSNHPLT-----------------------------------------------------------------------------------
    MDP0000335452_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Medtr6g012470.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1003072 ------------------------------------------------------------------------------------------------------------------------
    Cre10.g454400.t1.3_C ---------------------MYTLRVVASERRMSQV-----------------------------------------------------------------------------------
    AT2G26000.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    MDP0000255931_MALDO  ---------------------MFILRVHSVDTNHPLS-----------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                130       140       150       160       170       180       190       200       210       220       230       240
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    Glyma13g22710.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    MA_10428609g0020_PIC ------------------------------------------------------------------------------------------------------------------------
    supercontig_46.26_CA ------------------------------------------------------------------------------------------------------------------------
    Glyma09g17743.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g015431m_CI ------------------------------------------------------------------------------------------------------------------------
    MDP0000210436_MALDO  ------------------------------------------------------------------------------------------------------------------------
    MA_508435g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    Medtr2g104600.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Potri.005G110500.1_P ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1001828 ------------------------------------------------------------------------------------------------------------------------
    C.cajan_29736_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    MA_2413g0010_PICAB   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006182m_M ------------------------------------------------------------------------------------------------------------------------
    Ostta4_34845_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Tc02_g010060_THECC   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.790.r2.a ------------------------------------------------------------------------------------------------------------------------
    MDP0000313787_MALDO  ------------------------------------------------------------------------------------------------------------------------
    MA_28767g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    supercontig_10.127_C ------------------------------------------------------------------------------------------------------------------------
    28152.m000902_RICCO  ------------------------------------------------------------------------------------------------------------------------
    C.cajan_02948_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G066169_P03_ZE ------------------------------------------------------------------------------------------------------------------------
    MA_85047g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Gorai.009G125800.1_G ------------------------------------------------------------------------------------------------------------------------
    MDP0000304270_MALDO  IIQQLVDLMAREDLEIQDCSGATAFYHLVNCYPERVEVAECMLKKNPKLIRCHDTYNVVVAQWKPKGEKMARYLYSLTPPQTLRVVEAAQLISLDIAWDLIQLYPELAMATDIDRYIPLV
    Phvul.002G052300.1_P ------------------------------------------------------------------------------------------------------------------------
    selmo_89370_SELMO    ------------------------------------------------------------------------------------------------------------------------
    Sb04g005670.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01015569001_VI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g015426m_CI ------------------------------------------------------------------------------------------------------------------------
    selmo_403400_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Ca_06690_CICAR       ------------------------------------------------------------------------------------------------------------------------
    Gorai.001G043700.1_G ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01029385001_VI ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01013625001_VI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g016340m_CI ------------------------------------------------------------------------------------------------------------------------
    Solyc03g120000.2.1_S ------------------------------------------------------------------------------------------------------------------------
    Medtr5g005150.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Potri.007G063900.1_P ------------------------------------------------------------------------------------------------------------------------
    Gorai.005G232800.1_G ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G005205_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G041561_P01_ZE ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_008621m_M ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_033258m_M ------------------------------------------------------------------------------------------------------------------------
    CMK309C_CYAME        ------------------------------------------------------------------------------------------------------------------------
    MDP0000335450_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Phvul.003G167400.1_P ------------------------------------------------------------------------------------------------------------------------
    AK251438.1_HORVU     ------------------------------------------------------------------------------------------------------------------------
    Phvul.005G181500.1_P ------------------------------------------------------------------------------------------------------------------------
    orange1.1g011525m_CI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P13360_00 ------------------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    Pp1s40_296V6.1_PHYPA ------------------------------------------------------------------------------------------------------------------------
    Ca_02909_CICAR       ------------------------------------------------------------------------------------------------------------------------
    Tc00_g032110_THECC   ------------------------------------------------------------------------------------------------------------------------
    Cc02_g19690_COFCA    ------------------------------------------------------------------------------------------------------------------------
    MDP0000266286_MALDO  ------------------------------------------------------------------------------------------------------------------------
    EG4P66601_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Solyc07g008050.2.1_S ------------------------------------------------------------------------------------------------------------------------
    Cucsa.132280.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    Pp1s14_283V6.1_PHYPA ------------------------------------------------------------------------------------------------------------------------
    EG4P15130_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    orange1.1g018432m_CI ------------------------------------------------------------------------------------------------------------------------
    Ostta4_35565_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Os02g09060.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400053855 ------------------------------------------------------------------------------------------------------------------------
    27446.m000481_RICCO  ------------------------------------------------------------------------------------------------------------------------
    Potri.009G090100.1_P ------------------------------------------------------------------------------------------------------------------------
    PDK_30s766901g002_PH ------------------------------------------------------------------------------------------------------------------------
    29927.m000605_RICCO  ------------------------------------------------------------------------------------------------------------------------
    AT2G42160.1_ARATH    ------------------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    MA_494524g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    MA_79946g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1001547 ------------------------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P30140_00 ------------------------------------------------------------------------------------------------------------------------
    orange1.1g019425m_CI ------------------------------------------------------------------------------------------------------------------------
    Glyma15g00770.2_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g014500m_CI ------------------------------------------------------------------------------------------------------------------------
    Sb06g030620.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    PDK_30s709101g009_PH ------------------------------------------------------------------------------------------------------------------------
    GRMZM5G896756_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    Os12g32374.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_018065m_M ------------------------------------------------------------------------------------------------------------------------
    Bradi3g06180.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400009626 ------------------------------------------------------------------------------------------------------------------------
    Solyc10g049650.1.1_S ------------------------------------------------------------------------------------------------------------------------
    Glyma07g14551.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g014488m_CI ------------------------------------------------------------------------------------------------------------------------
    Bradi4g06630.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    C.cajan_01900_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01037858001_VI ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400009872 ------------------------------------------------------------------------------------------------------------------------
    C.cajan_21844_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    ITC1587_Bchr3_P06352 ------------------------------------------------------------------------------------------------------------------------
    Glyma01g45400.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Bradi5g23970.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    chr1.CM0088.530.r2.d ------------------------------------------------------------------------------------------------------------------------
    Sb08g016307.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    Os04g55480.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    EG4P66602_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1002888 ------------------------------------------------------------------------------------------------------------------------
    supercontig_106.73_C ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006523m_M ------------------------------------------------------------------------------------------------------------------------
    Medtr4g114970.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    orange1.1g023654m_CI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g032009m_CI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomP ------------------------------------------------------------------------------------------------------------------------
    Cc06_g08180_COFCA    ------------------------------------------------------------------------------------------------------------------------
    MDP0000279102_MALDO  ------------------------------------------------------------------------------------------------------------------------
    selmo_227454_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Cucsa.105760.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    MLOC_18786.1_HORVU   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.800.r2.a ------------------------------------------------------------------------------------------------------------------------
    MDP0000191872_MALDO  ------------------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando ------------------------------------------------------------------------------------------------------------------------
    LjSGA_019478.1_LOTJA ------------------------------------------------------------------------------------------------------------------------
    Ostta4_38022_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Cc11_g03280_COFCA    ------------------------------------------------------------------------------------------------------------------------
    AT2G14830.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    Glyma17g12120.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Potri.018G128100.1_P ------------------------------------------------------------------------------------------------------------------------
    MDP0000335452_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Medtr6g012470.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1003072 ------------------------------------------------------------------------------------------------------------------------
    Cre10.g454400.t1.3_C ------------------------------------------------------------------------------------------------------------------------
    AT2G26000.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    MDP0000255931_MALDO  ------------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                250       260       270       280       290       300       310       320       330       340       350       360
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    Glyma13g22710.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    MA_10428609g0020_PIC ------------------------------------------------------------------------------------------------------------------------
    supercontig_46.26_CA ------------------------------------------------------------------------------------------------------------------------
    Glyma09g17743.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g015431m_CI ------------------------------------------------------------------------------------------------------------------------
    MDP0000210436_MALDO  ------------------------------------------------------------------------------------------------------------------------
    MA_508435g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    Medtr2g104600.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Potri.005G110500.1_P ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1001828 ------------------------------------------------------------------------------------------------------------------------
    C.cajan_29736_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    MA_2413g0010_PICAB   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006182m_M ------------------------------------------------------------------------------------------------------------------------
    Ostta4_34845_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Tc02_g010060_THECC   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.790.r2.a ------------------------------------------------------------------------------------------------------------------------
    MDP0000313787_MALDO  ------------------------------------------------------------------------------------------------------------------------
    MA_28767g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    supercontig_10.127_C ------------------------------------------------------------------------------------------------------------------------
    28152.m000902_RICCO  ------------------------------------------------------------------------------------------------------------------------
    C.cajan_02948_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G066169_P03_ZE ------------------------------------------------------------------------------------------------------------------------
    MA_85047g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Gorai.009G125800.1_G ------------------------------------------------------------------------------------------------------------------------
    MDP0000304270_MALDO  ALANNRFAFKSGSRLSLWEKLIYYGIRIKHLPTKVNVPESDRSDQMHLSNKKENQRHLISSGIGLFRRLVANLQTLLGIHRIYHMKLIHERVKQLLPLMCKAASESMTSESMSFNKRKKL
    Phvul.002G052300.1_P ------------------------------------------------------------------------------------------------------------------------
    selmo_89370_SELMO    ------------------------------------------------------------------------------------------------------------------------
    Sb04g005670.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01015569001_VI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g015426m_CI ------------------------------------------------------------------------------------------------------------------------
    selmo_403400_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Ca_06690_CICAR       ------------------------------------------------------------------------------------------------------------------------
    Gorai.001G043700.1_G ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01029385001_VI ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01013625001_VI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g016340m_CI ------------------------------------------------------------------------------------------------------------------------
    Solyc03g120000.2.1_S ------------------------------------------------------------------------------------------------------------------------
    Medtr5g005150.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Potri.007G063900.1_P ------------------------------------------------------------------------------------------------------------------------
    Gorai.005G232800.1_G ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G005205_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G041561_P01_ZE ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_008621m_M ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_033258m_M ------------------------------------------------------------------------------------------------------------------------
    CMK309C_CYAME        ------------------------------------------------------------------------------------------------------------------------
    MDP0000335450_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Phvul.003G167400.1_P ------------------------------------------------------------------------------------------------------------------------
    AK251438.1_HORVU     ------------------------------------------------------------------------------------------------------------------------
    Phvul.005G181500.1_P ------------------------------------------------------------------------------------------------------------------------
    orange1.1g011525m_CI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P13360_00 ------------------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    Pp1s40_296V6.1_PHYPA ------------------------------------------------------------------------------------------------------------------------
    Ca_02909_CICAR       ------------------------------------------------------------------------------------------------------------------------
    Tc00_g032110_THECC   ------------------------------------------------------------------------------------------------------------------------
    Cc02_g19690_COFCA    ------------------------------------------------------------------------------------------------------------------------
    MDP0000266286_MALDO  ------------------------------------------------------------------------------------------------------------------------
    EG4P66601_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Solyc07g008050.2.1_S ------------------------------------------------------------------------------------------------------------------------
    Cucsa.132280.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    Pp1s14_283V6.1_PHYPA ------------------------------------------------------------------------------------------------------------------------
    EG4P15130_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    orange1.1g018432m_CI ------------------------------------------------------------------------------------------------------------------------
    Ostta4_35565_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Os02g09060.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400053855 ------------------------------------------------------------------------------------------------------------------------
    27446.m000481_RICCO  ------------------------------------------------------------------------------------------------------------------------
    Potri.009G090100.1_P ------------------------------------------------------------------------------------------------------------------------
    PDK_30s766901g002_PH ------------------------------------------------------------------------------------------------------------------------
    29927.m000605_RICCO  ------------------------------------------------------------------------------------------------------------------------
    AT2G42160.1_ARATH    ------------------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    MA_494524g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    MA_79946g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1001547 ------------------------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P30140_00 ------------------------------------------------------------------------------------------------------------------------
    orange1.1g019425m_CI ------------------------------------------------------------------------------------------------------------------------
    Glyma15g00770.2_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g014500m_CI ------------------------------------------------------------------------------------------------------------------------
    Sb06g030620.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    PDK_30s709101g009_PH ------------------------------------------------------------------------------------------------------------------------
    GRMZM5G896756_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    Os12g32374.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_018065m_M ------------------------------------------------------------------------------------------------------------------------
    Bradi3g06180.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400009626 ------------------------------------------------------------------------------------------------------------------------
    Solyc10g049650.1.1_S ------------------------------------------------------------------------------------------------------------------------
    Glyma07g14551.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g014488m_CI ------------------------------------------------------------------------------------------------------------------------
    Bradi4g06630.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    C.cajan_01900_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01037858001_VI ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400009872 ------------------------------------------------------------------------------------------------------------------------
    C.cajan_21844_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    ITC1587_Bchr3_P06352 ------------------------------------------------------------------------------------------------------------------------
    Glyma01g45400.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Bradi5g23970.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    chr1.CM0088.530.r2.d ------------------------------------------------------------------------------------------------------------------------
    Sb08g016307.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    Os04g55480.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    EG4P66602_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1002888 ------------------------------------------------------------------------------------------------------------------------
    supercontig_106.73_C ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006523m_M ------------------------------------------------------------------------------------------------------------------------
    Medtr4g114970.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    orange1.1g023654m_CI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g032009m_CI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomP ------------------------------------------------------------------------------------------------------------------------
    Cc06_g08180_COFCA    ------------------------------------------------------------------------------------------------------------------------
    MDP0000279102_MALDO  ------------------------------------------------------------------------------------------------------------------------
    selmo_227454_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Cucsa.105760.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    MLOC_18786.1_HORVU   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.800.r2.a ------------------------------------------------------------------------------------------------------------------------
    MDP0000191872_MALDO  ------------------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando ------------------------------------------------------------------------------------------------------------------------
    LjSGA_019478.1_LOTJA ------------------------------------------------------------------------------------------------------------------------
    Ostta4_38022_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Cc11_g03280_COFCA    ------------------------------------------------------------------------------------------------------------------------
    AT2G14830.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    Glyma17g12120.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Potri.018G128100.1_P ------------------------------------------------------------------------------------------------------------------------
    MDP0000335452_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Medtr6g012470.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1003072 ------------------------------------------------------------------------------------------------------------------------
    Cre10.g454400.t1.3_C ------------------------------------------------------------------------------------------------------------------------
    AT2G26000.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    MDP0000255931_MALDO  ------------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                370       380       390       400       410       420       430       440       450       460       470       480
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    Glyma13g22710.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    MA_10428609g0020_PIC ------------------------------------------------------------------------------------------------------------------------
    supercontig_46.26_CA ------------------------------------------------------------------------------------------------------------------------
    Glyma09g17743.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g015431m_CI ------------------------------------------------------------------------------------------------------------------------
    MDP0000210436_MALDO  ------------------------------------------------------------------------------------------------------------------------
    MA_508435g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    Medtr2g104600.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Potri.005G110500.1_P ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1001828 ------------------------------------------------------------------------------------------------------------------------
    C.cajan_29736_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    MA_2413g0010_PICAB   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006182m_M ------------------------------------------------------------------------------------------------------------------------
    Ostta4_34845_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Tc02_g010060_THECC   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.790.r2.a ------------------------------------------------------------------------------------------------------------------------
    MDP0000313787_MALDO  ------------------------------------------------------------------------------------------------------------------------
    MA_28767g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    supercontig_10.127_C ------------------------------------------------------------------------------------------------------------------------
    28152.m000902_RICCO  ------------------------------------------------------------------------------------------------------------------------
    C.cajan_02948_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G066169_P03_ZE ------------------------------------------------------------------------------------------------------------------------
    MA_85047g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Gorai.009G125800.1_G ------------------------------------------------------------------------------------------------------------------------
    MDP0000304270_MALDO  EAALCVAAERGHVEYITNFLGNDTYPLFGVKNQKGQSPFQIAVECRQHKVYNLIYLLDPLPKIRNTLGLDQSDKIQKRVGMTDDFGNNLLHTVARITPMSQIGHIQGANAKRITMVQVVG
    Phvul.002G052300.1_P ------------------------------------------------------------------------------------------------------------------------
    selmo_89370_SELMO    ------------------------------------------------------------------------------------------------------------------------
    Sb04g005670.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01015569001_VI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g015426m_CI ------------------------------------------------------------------------------------------------------------------------
    selmo_403400_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Ca_06690_CICAR       ------------------------------------------------------------------------------------------------------------------------
    Gorai.001G043700.1_G ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01029385001_VI ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01013625001_VI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g016340m_CI ------------------------------------------------------------------------------------------------------------------------
    Solyc03g120000.2.1_S ------------------------------------------------------------------------------------------------------------------------
    Medtr5g005150.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Potri.007G063900.1_P ------------------------------------------------------------------------------------------------------------------------
    Gorai.005G232800.1_G ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G005205_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G041561_P01_ZE ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_008621m_M ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_033258m_M ------------------------------------------------------------------------------------------------------------------------
    CMK309C_CYAME        ------------------------------------------------------------------------------------------------------------------------
    MDP0000335450_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Phvul.003G167400.1_P ------------------------------------------------------------------------------------------------------------------------
    AK251438.1_HORVU     ------------------------------------------------------------------------------------------------------------------------
    Phvul.005G181500.1_P ------------------------------------------------------------------------------------------------------------------------
    orange1.1g011525m_CI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P13360_00 ------------------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    Pp1s40_296V6.1_PHYPA ------------------------------------------------------------------------------------------------------------------------
    Ca_02909_CICAR       ------------------------------------------------------------------------------------------------------------------------
    Tc00_g032110_THECC   ------------------------------------------------------------------------------------------------------------------------
    Cc02_g19690_COFCA    ------------------------------------------------------------------------------------------------------------------------
    MDP0000266286_MALDO  ------------------------------------------------------------------------------------------------------------------------
    EG4P66601_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Solyc07g008050.2.1_S ------------------------------------------------------------------------------------------------------------------------
    Cucsa.132280.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    Pp1s14_283V6.1_PHYPA ------------------------------------------------------------------------------------------------------------------------
    EG4P15130_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    orange1.1g018432m_CI ------------------------------------------------------------------------------------------------------------------------
    Ostta4_35565_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Os02g09060.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400053855 ------------------------------------------------------------------------------------------------------------------------
    27446.m000481_RICCO  ------------------------------------------------------------------------------------------------------------------------
    Potri.009G090100.1_P ------------------------------------------------------------------------------------------------------------------------
    PDK_30s766901g002_PH ------------------------------------------------------------------------------------------------------------------------
    29927.m000605_RICCO  ------------------------------------------------------------------------------------------------------------------------
    AT2G42160.1_ARATH    ------------------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    MA_494524g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    MA_79946g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1001547 ------------------------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P30140_00 ------------------------------------------------------------------------------------------------------------------------
    orange1.1g019425m_CI ------------------------------------------------------------------------------------------------------------------------
    Glyma15g00770.2_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g014500m_CI ------------------------------------------------------------------------------------------------------------------------
    Sb06g030620.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    PDK_30s709101g009_PH ------------------------------------------------------------------------------------------------------------------------
    GRMZM5G896756_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    Os12g32374.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_018065m_M ------------------------------------------------------------------------------------------------------------------------
    Bradi3g06180.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400009626 ------------------------------------------------------------------------------------------------------------------------
    Solyc10g049650.1.1_S ------------------------------------------------------------------------------------------------------------------------
    Glyma07g14551.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g014488m_CI ------------------------------------------------------------------------------------------------------------------------
    Bradi4g06630.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    C.cajan_01900_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01037858001_VI ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400009872 ------------------------------------------------------------------------------------------------------------------------
    C.cajan_21844_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    ITC1587_Bchr3_P06352 ------------------------------------------------------------------------------------------------------------------------
    Glyma01g45400.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Bradi5g23970.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    chr1.CM0088.530.r2.d ------------------------------------------------------------------------------------------------------------------------
    Sb08g016307.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    Os04g55480.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    EG4P66602_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1002888 ------------------------------------------------------------------------------------------------------------------------
    supercontig_106.73_C ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006523m_M ------------------------------------------------------------------------------------------------------------------------
    Medtr4g114970.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    orange1.1g023654m_CI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g032009m_CI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomP ------------------------------------------------------------------------------------------------------------------------
    Cc06_g08180_COFCA    ------------------------------------------------------------------------------------------------------------------------
    MDP0000279102_MALDO  ------------------------------------------------------------------------------------------------------------------------
    selmo_227454_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Cucsa.105760.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    MLOC_18786.1_HORVU   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.800.r2.a ------------------------------------------------------------------------------------------------------------------------
    MDP0000191872_MALDO  ------------------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando ------------------------------------------------------------------------------------------------------------------------
    LjSGA_019478.1_LOTJA ------------------------------------------------------------------------------------------------------------------------
    Ostta4_38022_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Cc11_g03280_COFCA    ------------------------------------------------------------------------------------------------------------------------
    AT2G14830.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    Glyma17g12120.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Potri.018G128100.1_P ------------------------------------------------------------------------------------------------------------------------
    MDP0000335452_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Medtr6g012470.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1003072 ------------------------------------------------------------------------------------------------------------------------
    Cre10.g454400.t1.3_C ------------------------------------------------------------------------------------------------------------------------
    AT2G26000.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    MDP0000255931_MALDO  ------------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                490       500       510       520       530       540       550       560       570       580       590       600
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    Glyma13g22710.1_GLYM ----------------------------------------------------------------------------------------------------------PQTIFQSQSQSQS-
    MA_10428609g0020_PIC ------------------------------------------------------------------------------------------------------------------------
    supercontig_46.26_CA -----------------------------------------------------------------------------------------------------T----PELDF---TPTTK-
    Glyma09g17743.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g015431m_CI ------------------------------------------------------------------------------------------------------------------------
    MDP0000210436_MALDO  ------------------------------------------------------------------------------------------------------------------------
    MA_508435g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    Medtr2g104600.1_MEDT --MEGLIASEYTTVVQYKNDKESSNIGSLFCVASSSYSYMKLLADDLGRFQTFASSSSSPLSNPTNSTTVPMWSSSRV-------------------------VSEEEQTESSSFSTSL-
    Potri.005G110500.1_P ------------------------------------------------------------------MFSTGMSPSSSAA-AVSGATLEDHF-------------WQPTAEESSSSTNEA-
    Millet_GLEAN_1001828 -------------------------------------------------------------------SPAAAAAD--------------------------------------ELPGAT-
    C.cajan_29736_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    MA_2413g0010_PICAB   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006182m_M -----------------------------------------------------------------------MSPSSS-A-AVSVTSPEDSFRPSEVMI---TIDYSNSSTSSSSPMTQS-
    Ostta4_34845_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Tc02_g010060_THECC   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.790.r2.a ----------------------------------------------------------------------------------------------------------PQTIF-----SAP-
    MDP0000313787_MALDO  -----------------------------------------------------------------------------------------------------L----KGADFTAVTTSKA-
    MA_28767g0010_PICAB  ----------------------------------------------------------------------MSESASAGMSESSSTNTTMAAVEDIFKALDMNGQEDAGEVSDLRGPTKA-
    supercontig_10.127_C -----------------------------------------------------------------------MSPSSSTL-A-----RDDKFRQPAIMA---------PDEASVSIMTQA-
    28152.m000902_RICCO  ------------------------------------------------------------------------------------------------------------------------
    C.cajan_02948_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G066169_P03_ZE ---------------------------------------------------------------------AAVAADEVGTSSG------GVTTSRPLSSHPPPSTTTSS-ILTLELPGAN-
    MA_85047g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Gorai.009G125800.1_G ------------------------------------------------------------------------------------------------------------------MNTEA-
    MDP0000304270_MALDO  ALIVTIMFAATFTVFGDNDGKKDVRTFLTSKDWQLVPGLSLGLLGLPRQHTLGLLARALCHCSRACPSAPAHAGAALIERHCGKPKSPSKLRTVIIYYFHVTEFEHSSFRSLPRRGFPA-
    Phvul.002G052300.1_P ------------------------------------------------------------------------------------------------------------------------
    selmo_89370_SELMO    ------------------------------------------------------------------------------------------------------------------------
    Sb04g005670.1_SORBI  -----------------------------------------------------------------------MATGGKPA----------------------APQPPPAAPSSSDRALES-
    GSVIVT01015569001_VI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g015426m_CI ------------------------------------------------------------------------------------------------------------------------
    selmo_403400_SELMO   --------------------------------------------------------------------------------------------------------GDHSVPSELPDWIET-
    Ca_06690_CICAR       ----------------------------------------------------------------------------------------------------------PETVF------SA-
    Gorai.001G043700.1_G -------------------------------------------------------------------------------------------------------------DAEEIEFYTT-
    GSVIVT01029385001_VI ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01013625001_VI -----------------------------------------------------------------------MSATSTSANTVAGPSPNDIFRPPS------AMISGDLADDVVSNVTQ--
    orange1.1g016340m_CI ------------------------------------------------------------------------------------------------------------------------
    Solyc03g120000.2.1_S ----------------------------------------------------------------------------------------------------------MDSSTSMCNLTEV-
    Medtr5g005150.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Potri.007G063900.1_P -----------------------------------------------------------------------MSSSSSTA-AVSRASPEDHF-------------WQLTAEESSSSLSKT-
    Gorai.005G232800.1_G ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G005205_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G041561_P01_ZE -----------------------------------------------------------------------MATGGKSA----------------------APQPPPAASSSSERALES-
    cassava4.1_008621m_M -----------------------------------------------------------------------------------------------------F----EEATFSTVSTTTT-
    cassava4.1_033258m_M ----------------------------------------------------------------------------MSLSSSAVVSLASLEDHSRVSEAMITGDYSDCYTSLPSSIAQT-
    CMK309C_CYAME        --------------------------------------------------------------LQQAQCMHPHQSSEADESSTGVQNESAPRWANTRLTKGPSEAAPEAPVSDLSPESSTA
    MDP0000335450_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Phvul.003G167400.1_P ----------------------------------------------------------------------------------------------------------PQTIF------QS-
    AK251438.1_HORVU     ------------------------------------------------------------------ALTVSAAADDVGTSSSAAGGTSASNPISPRSSNPLPSTTSA--TTPLELPGVT-
    Phvul.005G181500.1_P -----------------------------------------------------------------------MWSSTSSV---------------AIAIAAPSSDEDPTESSSFSFSTAL-
    orange1.1g011525m_CI -----------------------------------------------------------------------------------------------------I----EEAGFCTVSSTAT-
    GSMUA_Achr3P13360_00 -----------------------------------------------------------------------MS-------TSAPAAQDDVLRPASPPPPHPSESCGELVEPPVLDLTQA-
    evm_27.model.AmTr_v1 -----------------------------------------------------------------------------------------------------FSTTKYGDASSSPTSTHS-
    Pp1s40_296V6.1_PHYPA ----------------------------------------------------------------------LDAMLSSNVTAEDGSTDQPATSASGTNGGGTDEGTGGEAKLHDDGITKR-
    Ca_02909_CICAR       -----------------------------------------------------------------------MWSSSRV-----------------------SEAEEEKQSESCSFSTSL-
    Tc00_g032110_THECC   -----------------------------------------------------------------------MSSSSSTV------TGDDKFRQSETVI--------AGDLSAPNMSTEA-
    Cc02_g19690_COFCA    ------------------------------------------------------------------------------------------------------------------------
    MDP0000266286_MALDO  -----------------------------------------------------------------------------------------------------L----EDADFTAVTTSKT-
    EG4P66601_ELAGV      -------------------------------------------------------------------------------------------------------------------MGRR-
    Solyc07g008050.2.1_S -----------------------------------------------------------------------------------------------------TTIATTSSAVYGPNPNSD-
    Cucsa.132280.1_CUCSA -----------------------------------------------------------------------------------------------------VGIPLDESSTTSTISQRN-
    Pp1s14_283V6.1_PHYPA ------------------------------------------------------------------------------------------------------------------------
    EG4P15130_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    orange1.1g018432m_CI -----------------------------------------------------------------------------------------------------I----EEAGFCTVSSTAT-
    Ostta4_35565_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Os02g09060.1_ORYSA   -----------------------------------------------------------------------MATSGG--------------------------EDPSGSASSSASALDS-
    PGSC0003DMP400053855 -----------------------------------------------------------------------------------------------------TTIATTSSAAHGPKPNSD-
    27446.m000481_RICCO  -------------------------------------------------------------------MSVDMSPSPSSS-AAVASSPGEQFRPSEAMI---S-----SSSSSSSLMTQA-
    Potri.009G090100.1_P ------------------------------------------------------------------------------------------------------------------------
    PDK_30s766901g002_PH ------------------------------------------------------------------------------------------------------------------------
    29927.m000605_RICCO  -----------------------------------------------------------------------------------------------------L----ESTTFSSVSTTTT-
    AT2G42160.1_ARATH    -----------------------------------------------------------------------------------------------------VEEEESGFTYASKRAQPP-
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    MA_494524g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    MA_79946g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1001547 ------------------------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P30140_00 ------------------------------------------------------------------------------------------------------------------------
    orange1.1g019425m_CI -----------------------------------------------------------------------------------------------------I----EEAGFCTVSSTAT-
    Glyma15g00770.2_GLYM -----------------------------------------------------------------------MWSSTSST---------------A---AIPSDEEPSESSSSSSFSTSL-
    orange1.1g014500m_CI -----------------------------------------------------------------------------------------------------I----EEAGFCTVSSTAT-
    Sb06g030620.1_SORBI  -----------------------------------------------------------------SASPAAVAADEVGTSSG---GAATSHPLSPLSGHPPPSTTTSS-IPPLELPGAI-
    PDK_30s709101g009_PH -----------------------------------------------------------------RQD-DAAAGAGEPQQEGAAGTSSSSSSISTL--TPP-----------------K-
    GRMZM5G896756_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    Os12g32374.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_018065m_M ------------------------------------------------------------------------------------------------------------------------
    Bradi3g06180.1_BRADI -----------------------------------------------------------------------MATA--------------------------NDSGDPASPSSSTRALES-
    PGSC0003DMP400009626 ------------------------------------------------------------------------------------------------------------------------
    Solyc10g049650.1.1_S ------------------------------------------------------------------------------------------------------------------------
    Glyma07g14551.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g014488m_CI -----------------------------------------------------------------------------------------------------I----EEAGFCTVSSTAT-
    Bradi4g06630.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    C.cajan_01900_CAJCA  ----------------------------------------------------------------------------------------------------------PETLL---------
    GSVIVT01037858001_VI ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400009872 -------------------------------------------------------------------------------------------------------MDSGDSSTSMSNLTQV-
    C.cajan_21844_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    ITC1587_Bchr3_P06352 -----------------------------------------------------------------------MS-------TSAPTAQEDVLRPASPPPPHPSESCGELVEPSVSGLTQA-
    Glyma01g45400.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Bradi5g23970.1_BRADI -----------------------------------------------------------------DRT--TAGADEVGTSSGAPGCITASSPISPRSGHPLPSTASP--TTPLELPGAT-
    chr1.CM0088.530.r2.d ------------------------------------------------------------------------------------------------------------------------
    Sb08g016307.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    Os04g55480.1_ORYSA   --------------------------------------------------------------------AAAATAVAAGETSG------TSHPLSPRSGDPLPTTTSASVTAPLELPGAT-
    EG4P66602_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1002888 ------------------------------------------------------------------------------------------------------------------------
    supercontig_106.73_C ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006523m_M -----------------------------------------------------------------------------------------------------F----EEATFSTVSTTTT-
    Medtr4g114970.1_MEDT ----------------------------------------------------------------------------------------------------------PELIF------SA-
    orange1.1g023654m_CI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g032009m_CI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomP ---------------------------------------------------------------------------------TEEGCSRSTAAVAPL--HPSPELLDDA-VGDLHEEAGT-
    Cc06_g08180_COFCA    ----------------------------------------------------------------------------------------------------------ITVTSATHGPNRT-
    MDP0000279102_MALDO  -----------------------------------------------------------------------------------------------------L----EDADFTAVTTSKT-
    selmo_227454_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Cucsa.105760.1_CUCSA -----------------------------------------------------------------------MLTTSTTALDVPATSDEGFRAPKSSLVSSDPSVSFSTSSSSISGSTQA-
    MLOC_18786.1_HORVU   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.800.r2.a ------------------------------------------------------------------------------------------------------------------------
    MDP0000191872_MALDO  ------------------------------MDWQLVPGLSLGLLGLPRQHTLGLLARALCHCSRACPSAPAHAGAALIERHCGKPKSPSKLRTVIIYYFHVTEFEHSSFRSLPRRGFPA-
    evm_27.model.AmTr_v1 -----MVCSDVQDPLIEGPSFHIPSHSHSHSHSLSSSTFKFGPAIVSHNQTPLPCLPPQPAAKLDGEVLRLSLSDSGEKSELLRRPLLDTGEKSEIFRQSLPDSGETSDEPSVSVLTQE-
    ITC1587_BchrUn_rando ---------------------------------------------------------------------------------TEEGCSRSTAAVAPL--HPSPELVDDA-VGDLHEEAGT-
    LjSGA_019478.1_LOTJA ----------------------------------------------------------------------------------------------MWNSNTASEIEPSSSSSSSSFSTTL-
    Ostta4_38022_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Cc11_g03280_COFCA    --------------------------------------------------------------------------------------------------------------MEHDDLTQA-
    AT2G14830.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    Glyma17g12120.1_GLYM ----------------------------------------------------------------------------------------------------------PRTIF---------
    Potri.018G128100.1_P -----------------------------------------------------------------------------------------------------L----EETTF--ISAAAT-
    MDP0000335452_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Medtr6g012470.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1003072 -----------------------------------------------------------------------MATAGKPA----------------------ASLPPAAAPSTSAHALDS-
    Cre10.g454400.t1.3_C ------------------------------------------------------------------------------ALPSAMGSRGDGHPPRDAGDDSDSDSEGELLGLDLDNDSEA-
    AT2G26000.2_ARATH    -----------------------------------------------------------------------------------------------------MNSASVSGESSLSDMIQT-
    MDP0000255931_MALDO  -----------------------------------------------------------------------------------------------------L----EDADFTAVTTSKT-

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                610       620       630       640       650       660       670       680       690       700       710       720
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    Glyma13g22710.1_GLYM ------------------------------------------------------QSQSN--N------PKF--SERRGALHLF-RT----------------------------------
    MA_10428609g0020_PIC ------------------------------------------------------------------------------------------------------------------------
    supercontig_46.26_CA ------------------------------------------------------TAPSNP-S------PKV--SERWGMVHLY-RN----------------------------------
    Glyma09g17743.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g015431m_CI ------------------------------------------------------------------------------------------------------------------------
    MDP0000210436_MALDO  ------------------------------------------------------------------------------------------------------------------------
    MA_508435g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    Medtr2g104600.1_MEDT ------------------------------------------------------FNFSSG-N------PRI--EETRGLMHVF-PE----------------------------------
    Potri.005G110500.1_P ------------------------------------------------------FPFSSG-N------PRI--EETRGVMHLF-SN----------------------------------
    Millet_GLEAN_1001828 ------------------------------------------------------SAAPAR-S------PRI--HHTSGVIHLY-HSSSS-------------------TSTTSSSSYASA
    C.cajan_29736_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    MA_2413g0010_PICAB   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006182m_M ------------------------------------------------------FPFSSG-N------PRI--EETRGVMHLF-SS----------------------------------
    Ostta4_34845_OSTTA   -------------------------------------------------------------X----------------------------------------------------------
    Tc02_g010060_THECC   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.790.r2.a ------------------------------------------------------IPQSH--I------PKF--TERRGFLHLF-RT----------------------------------
    MDP0000313787_MALDO  ------------------------------------------------------TAAAQS-NPKTT--PKF--SERKGIVHLF-RK----------------------------------
    MA_28767g0010_PICAB  ------------------------------------------------------VRFSSG-N------PRV--EEIRGVMHLF-------------------------------------
    supercontig_10.127_C ------------------------------------------------------FHFSSG-N------PRI--EETRGVMHLF-SY----------------------------------
    28152.m000902_RICCO  ------------------------------------------------------------------------------------------------------------------------
    C.cajan_02948_CAJCA  -------------------------------------------------------------------------------MHLF-PH----------------------------------
    GRMZM2G066169_P03_ZE ------------------------------------------------------PVAPSR-S------PRI--LHTRGVIHLY-HSSSS-------------------TST--SSSYASA
    MA_85047g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Gorai.009G125800.1_G ------------------------------------------------------IPFSSG-N------PRI--EETRGVMHLF-SN----------------------------------
    MDP0000304270_MALDO  ------------------------------------------------------FPFSSG-N------PRI--EETRGIMLLY-RD----------------------------------
    Phvul.002G052300.1_P ------------------------------------------------------------------------------------------------------------------------
    selmo_89370_SELMO    ------------------------------------------------------------------------------------------------------------------------
    Sb04g005670.1_SORBI  ------------------------------------------------------VHFSSG-N------PRI--EETRGVVVLH-PD----------------------------------
    GSVIVT01015569001_VI -------------------------------------------------------ISSNP-N------PNL--GERRGMVHLF-RS----------------------------------
    orange1.1g015426m_CI ------------------------------------------------------------------------------------------------------------------------
    selmo_403400_SELMO   ------------------------------------------------------LRFSSG-N------PRV--ETTRGEMHLF-RN----------------------------------
    Ca_06690_CICAR       ------------------------------------------------------P-QSQ--N------PKF--SERRGVLHLF-RT----------------------------------
    Gorai.001G043700.1_G ------------------------------------------------------TSLSNP-N------PKF--RERRGVVHLY-RK----------------------------------
    GSVIVT01029385001_VI ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01013625001_VI ------------------------------------------------------LPFSSG-N------PRI--EETRGVMHLY-RD----------------------------------
    orange1.1g016340m_CI ------------------------------------------------------------------------------------------------------------------------
    Solyc03g120000.2.1_S ------------------------------------------------------FYFSSG-N------PRI--EETRGVMHLF-SN----------------------------------
    Medtr5g005150.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Potri.007G063900.1_P ------------------------------------------------------LPFSSG-N------PRI--EETRGVMHLF-SN----------------------------------
    Gorai.005G232800.1_G ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G005205_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G041561_P01_ZE ------------------------------------------------------VHFSSG-N------PRI--EETRGVVVLH-PD----------------------------------
    cassava4.1_008621m_M ------------------------------------------------------QSNPIH-N------PKY--SERRGVVHLY-RN----------------------------------
    cassava4.1_033258m_M ------------------------------------------------------FPFSSG-N------PRI--EETRGVMRLF-SN----------------------------------
    CMK309C_CYAME        LPAVGAASERGEVCEAWRKQPATGTESVDPPARANDFRKPKGYARREPEDCPKWLDFRAG-N------PEIPLDTVTGRIHLL-ADRQSARRVQEPQLESSAPAASTTAAVRKPTESSLG
    MDP0000335450_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Phvul.003G167400.1_P ------------------------------------------------------HSQSN--N------PKF--SERRGALHLF-RT----------------------------------
    AK251438.1_HORVU     ------------------------------------------------------SAAASR-N------PRI--HHTRGILHLY-RSSPA-------------------------SSYASA
    Phvul.005G181500.1_P ------------------------------------------------------FNFSSG-N------PRI--EETRGLMHLF-PD----------------------------------
    orange1.1g011525m_CI ------------------------------------------------------RSRANP-N------PKF--SERRGLVHLF-RG----------------------------------
    GSMUA_Achr3P13360_00 ------------------------------------------------------VPFSSG-N------PRI--EETRGIMYLY-PE----------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------LFFFSG-N------PRF--QESKGIIHLF-RN----------------------------------
    Pp1s40_296V6.1_PHYPA ------------------------------------------------------INFSSG-N------PRV--EATRGVMHLY-RD----------------------------------
    Ca_02909_CICAR       ------------------------------------------------------FNFSSG-N------PRI--EETRGLMHVF-PE----------------------------------
    Tc00_g032110_THECC   ------------------------------------------------------ISFSSG-N------PRI--EETRGVMHLF-SN----------------------------------
    Cc02_g19690_COFCA    ------------------------------------------------------------------------------------------------------------------------
    MDP0000266286_MALDO  ------------------------------------------------------TAAAES-DPKTTPXPKF--SERRGIAHLF-RK----------------------------------
    EG4P66601_ELAGV      ------------------------------------------------------KPTHAG--------GRS--TLLRGVVHLY-RSRSS-------------------PSAAAAS-----
    Solyc07g008050.2.1_S ------------------------------------------------------LSSSSG-S------LHL--SELRGIAHLF-RH----------------------------------
    Cucsa.132280.1_CUCSA ------------------------------------------------------STASHA-N------TKF--CERRGIVHLF-RS----------------------------------
    Pp1s14_283V6.1_PHYPA ------------------------------------------------------------------------------------------------------------------------
    EG4P15130_ELAGV      ----------------------------------------------------------------------------MRCRHRFHPDFMRDWVVHGKP-----------------------
    orange1.1g018432m_CI ------------------------------------------------------RSRANP-N------PKF--SERRGLVHLF-RG----------------------------------
    Ostta4_35565_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Os02g09060.1_ORYSA   ------------------------------------------------------LPFSSG-N------PRI--EETRGVVLLH-PE----------------------------------
    PGSC0003DMP400053855 ------------------------------------------------------LTSSSG-S------LHL--SELRGIAHLF-RH----------------------------------
    27446.m000481_RICCO  ------------------------------------------------------FPFSSG-N------PRI--EETRGVMHLFNNN----------------------------------
    Potri.009G090100.1_P ------------------------------------------------------------------------------------------------------------------------
    PDK_30s766901g002_PH ------------------------------------------------------------------------------------------------------------------------
    29927.m000605_RICCO  --------------------------------------------------------TSQS-N------PKY--SERRGVVHLH-RS----------------------------------
    AT2G42160.1_ARATH    ------------------------------------------------------LKLIQP-S------LKL--TDRKGLIHLY-RK----------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    MA_494524g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    MA_79946g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1001547 ------------------------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando -------------------------------------------------------------------------MARRGRMSLN-RQ----------------------------------
    GSMUA_Achr3P30140_00 ------------------------------------------------------------------------------------------------------------------------
    orange1.1g019425m_CI ------------------------------------------------------RSRANP-N------PKF--SERRGLVHLF-RG----------------------------------
    Glyma15g00770.2_GLYM ------------------------------------------------------FNFSSG-N------PRI--EETRGLMHLF-PD----------------------------------
    orange1.1g014500m_CI ------------------------------------------------------RSRANP-N------PKF--SERRGLVHLF-RG----------------------------------
    Sb06g030620.1_SORBI  ------------------------------------------------------PAAPGR-S------PRI--LHTRGVIHLY-HSSSS-------------------TST--SSSYASA
    PDK_30s709101g009_PH ------------------------------------------------------NPNPNPNN------PRI--QLLRGV-----------------------------------------
    GRMZM5G896756_P02_ZE -------------------------------------------------------MSSVAGEGEGEGGGRRRREEPRSQQHED-------------------------------------
    Os12g32374.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_018065m_M ------------------------------------------------------------------------------------------------------------------------
    Bradi3g06180.1_BRADI ------------------------------------------------------VPFSSG-N------PRI--EETRGVVLLH-PD----------------------------------
    PGSC0003DMP400009626 ------------------------------------------------------------------------------------------------------------------------
    Solyc10g049650.1.1_S ------------------------------------------------------------------------------------------------------------------------
    Glyma07g14551.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g014488m_CI ------------------------------------------------------RSRANP-N------PKF--SERRGLVHLF-RG----------------------------------
    Bradi4g06630.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    C.cajan_01900_CAJCA  --------------------------------------------------------ESEW-K------AKL--RERRGALHLF-RS----------------------------------
    GSVIVT01037858001_VI ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400009872 ------------------------------------------------------FHFSSG-N------PRI--EETRGVMHLF-SN----------------------------------
    C.cajan_21844_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    ITC1587_Bchr3_P06352 ------------------------------------------------------VPFSSG-N------PRI--EETRGIMYLY-PE----------------------------------
    Glyma01g45400.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Bradi5g23970.1_BRADI ------------------------------------------------------SAASAR-N------PRI--QHTRGILHLY-RSSTS-------------------SPA---SSYASA
    chr1.CM0088.530.r2.d ------------------------------------------------------------------------------------------------------------------------
    Sb08g016307.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    Os04g55480.1_ORYSA   ------------------------------------------------------SASPAR-N------PKI--NYTRGILHLY-RSSSS-------------------SSS--TASYASA
    EG4P66602_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1002888 -------------------------------------------------------------------------------MRIYSCTYLRRLSGSARAGEDDRNKIRRTRRGSGGSRSKDQ
    supercontig_106.73_C ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006523m_M ------------------------------------------------------QSNPIH-N------PKY--SERRGVVHLY-RN----------------------------------
    Medtr4g114970.1_MEDT ------------------------------------------------------PTQSQT-N------PKF--TERRGVLHLF-RS----------------------------------
    orange1.1g023654m_CI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g032009m_CI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomP ------------------------------------------------------SWNPNP-N------PRI--HLLRGIVHLY-RSLLP-------------------PST---------
    Cc06_g08180_COFCA    ------------------------------------------------------ASDACN-S------LNS--QELRGIAHLF-RQ----------------------------------
    MDP0000279102_MALDO  ------------------------------------------------------TAAAES-DPKTTPXPKF--SERRGIAHLF-RK----------------------------------
    selmo_227454_SELMO   -------------------------------------------------------------DGEEEIEQRV--AIFRGAVHLF-RDVFE-------------------RPG---------
    Cucsa.105760.1_CUCSA ------------------------------------------------------FHFSSG-N------PRI--EEIRGVVHLF-RD----------------------------------
    MLOC_18786.1_HORVU   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.800.r2.a ------------------------------------------------------------------------------------------------------------------------
    MDP0000191872_MALDO  ------------------------------------------------------FPFSSG-N------PRI--EETRGIMLLY-RD----------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------VAFSSG-N------PRI--EETRGIMHLF-RD----------------------------------
    ITC1587_BchrUn_rando ------------------------------------------------------SRNPNP-N------PRI--QLLRGIVHLY-RSLSP-------------------PST---------
    LjSGA_019478.1_LOTJA ------------------------------------------------------FNFSSG-N------PRI--EETRGLMHLI-PA----------------------------------
    Ostta4_38022_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Cc11_g03280_COFCA    ------------------------------------------------------FYFSSG-N------PRI--EETRGVMHLF-RD----------------------------------
    AT2G14830.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    Glyma17g12120.1_GLYM ------------------------------------------------------QSQTN--N------PKF--SQRRGALHLF-RT----------------------------------
    Potri.018G128100.1_P ------------------------------------------------------TSTTAA-T------TKF--NERRGISHLY-RN----------------------------------
    MDP0000335452_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Medtr6g012470.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1003072 ------------------------------------------------------VHFSSG-N------PRI--EETRGVVLLH-PE----------------------------------
    Cre10.g454400.t1.3_C ------------------------------------------------------IEFTAG-N------PRV--EHITGVVHLF-RPTPGRLPANAPPPPTPPPGFGHVTPTHAGGGKGVA
    AT2G26000.2_ARATH    ------------------------------------------------------VHFSSG-N------PRI--GETRGVMHLI-SD----------------------------------
    MDP0000255931_MALDO  ------------------------------------------------------TAAAES-DPKTTPXPKF--SERRGIAHLF-RK----------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                730       740       750       760       770       780       790       800       810       820       830       840
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    Glyma13g22710.1_GLYM -----------------------------------------SSHSSL---PTQ-------------------------------------------------------------------
    MA_10428609g0020_PIC ------------------------------------------------------------------------------------------------------------------------
    supercontig_46.26_CA -----------------------------------------SSQTSL---PNP-------------------------------------------------------------------
    Glyma09g17743.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g015431m_CI ------------------------------------------------------------------------------------------------------------------------
    MDP0000210436_MALDO  ------------------------------------------------------------------------------------------------------------------------
    MA_508435g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    Medtr2g104600.1_MEDT ------------Q-------------------------T----P--P---SLP-------------------------------------------------------------------
    Potri.005G110500.1_P ------------N-------------------------G----I--S---DLP-------------------------------------------------------------------
    Millet_GLEAN_1001828 VA---ATSSSS-HG-----------------------PAAPQPASDS---LLP-------------------------------------------------------------------
    C.cajan_29736_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    MA_2413g0010_PICAB   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006182m_M ------------D-------------------------G----I--S---GLP-------------------------------------------------------------------
    Ostta4_34845_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Tc02_g010060_THECC   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.790.r2.a -----------------------------------------TTAS-------S-------------------------------------------------------------------
    MDP0000313787_MALDO  -----------------------------------------IRQSSL---PST-------------------------------------------------------------------
    MA_28767g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    supercontig_10.127_C ------------D-------------------------A----VPSS---DLP-------------------------------------------------------------------
    28152.m000902_RICCO  ------------------------------------------------------------------------------------------------------------------------
    C.cajan_02948_CAJCA  ------------E-------------------------T----R--S---TLP-------------------------------------------------------------------
    GRMZM2G066169_P03_ZE VA---ATSSSS-SG-----------------------PATPQPASDS---HLP-------------------------------------------------------------------
    MA_85047g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Gorai.009G125800.1_G ------------D-------------------------T----V--S---ALP-------------------------------------------------------------------
    MDP0000304270_MALDO  ------------DA-----------------------DADVIPTSPS---NLP-------------------------------------------------------------------
    Phvul.002G052300.1_P ------------------------------------------------------------------------------------------------------------------------
    selmo_89370_SELMO    ------------------------------------------------------------------------------------------------------------------------
    Sb04g005670.1_SORBI  ------------PP-----------------------AAAS----WS---HLP-------------------------------------------------------------------
    GSVIVT01015569001_VI ----------------------------------------LSLATAL---PRT-------------------------------------------------------------------
    orange1.1g015426m_CI ------------------------------------------------------------------------------------------------------------------------
    selmo_403400_SELMO   --------------------------------------TAAQPGAIG---ALP-------------------------------------------------------------------
    Ca_06690_CICAR       -----------------------------------------ASQSSL---PNS-------------------------------------------------------------------
    Gorai.001G043700.1_G -----------------------------------------ASQSSL---PNP-------------------------------------------------------------------
    GSVIVT01029385001_VI ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01013625001_VI ------------DI------------------------S----LSSS---DLP-------------------------------------------------------------------
    orange1.1g016340m_CI ------------------------------------------------------------------------------------------------------------------------
    Solyc03g120000.2.1_S ------------DV-------------------------------AS---HLP-------------------------------------------------------------------
    Medtr5g005150.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Potri.007G063900.1_P ------------D-------------------------A----V--S---DLP-------------------------------------------------------------------
    Gorai.005G232800.1_G ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G005205_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G041561_P01_ZE ------------PP-----------------------AAAS----WS---HVP-------------------------------------------------------------------
    cassava4.1_008621m_M -----------------------------------------ASQSSL---PNP-------------------------------------------------------------------
    cassava4.1_033258m_M -------------------------------------------DDVS---GLP-------------------------------------------------------------------
    CMK309C_CYAME        DHIARSILEHKQSTLNEDEDQTKRAEVEVGTPKTLAEASSDSVKGSHATGEVP--------------------------------------------------AAHWKSSPSSLTCSDFA
    MDP0000335450_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Phvul.003G167400.1_P -----------------------------------------SPHSSL---PTP-------------------------------------------------------------------
    AK251438.1_HORVU     VATTATPSSSS-SG-----------------------PAAPPLPCDS---LLP-------------------------------------------------------------------
    Phvul.005G181500.1_P ------------D-------------------------T----P--A---TLP-------------------------------------------------------------------
    orange1.1g011525m_CI -----------------------------------------TSQSYQ---QNP-------------------------------------------------------------------
    GSMUA_Achr3P13360_00 ------------D-------------------------A----TSSS---ILP-------------------------------------------------------------------
    evm_27.model.AmTr_v1 --------------------------------------VSDLPASPD---ALP-------------------------------------------------------------------
    Pp1s40_296V6.1_PHYPA --------------------------------------TASEPGSLE---KLP-------------------------------------------------------------------
    Ca_02909_CICAR       ------------D-------------------------T----P--S---SLP-------------------------------------------------------------------
    Tc00_g032110_THECC   ------------D-------------------------A----V--S---TLP-------------------------------------------------------------------
    Cc02_g19690_COFCA    ------------------------------------------------------------------------------------------------------------------------
    MDP0000266286_MALDO  -----------------------------------------IRQSSL---PCX-------------------------------------------------------------------
    EG4P66601_ELAGV      ------------SS-----------------------SSNPHPSPDS---LLP-------------------------------------------------------------------
    Solyc07g008050.2.1_S --------------------------------------LPSSTSTTI---SNP-------------------------------------------------------------------
    Cucsa.132280.1_CUCSA -----------------------------------------VSNSSL---PNP-------------------------------------------------------------------
    Pp1s14_283V6.1_PHYPA ------------------------------------------------------------------------------------------------------------------------
    EG4P15130_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    orange1.1g018432m_CI -----------------------------------------TSQSYQ---QNP-------------------------------------------------------------------
    Ostta4_35565_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Os02g09060.1_ORYSA   ------------PP-----------------------AASS----SS---LLP-------------------------------------------------------------------
    PGSC0003DMP400053855 --------------------------------------LPSSTSTTI---SNP-------------------------------------------------------------------
    27446.m000481_RICCO  ------------D-------------------------A----V--S---PLP-------------------------------------------------------------------
    Potri.009G090100.1_P ------------------------------------------------------------------------------------------------------------------------
    PDK_30s766901g002_PH ------------------------------------------------------------------------------------------------------------------------
    29927.m000605_RICCO  -----------------------------------------PSQSSL---SNP-------------------------------------------------------------------
    AT2G42160.1_ARATH    -----------------------------------------SSHSSL---PNP-------------------------------------------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    MA_494524g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    MA_79946g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1001547 ------------------------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P30140_00 ------------------------------------------------------------------------------------------------------------------------
    orange1.1g019425m_CI -----------------------------------------TSQSYQ---QNP-------------------------------------------------------------------
    Glyma15g00770.2_GLYM ------------D-------------------------T----P--S---TLP-------------------------------------------------------------------
    orange1.1g014500m_CI -----------------------------------------TSQSYQ---QNP-------------------------------------------------------------------
    Sb06g030620.1_SORBI  VA---ATSSSS-SV-----------------------PAAPQLASDS---HLP-------------------------------------------------------------------
    PDK_30s709101g009_PH ------------------------------------------------------------------------------------------------------------------------
    GRMZM5G896756_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    Os12g32374.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_018065m_M ------------------------------------------------------------------------------------------------------------------------
    Bradi3g06180.1_BRADI ------------PP-----------------------AAAAAPSLSS---DLP-------------------------------------------------------------------
    PGSC0003DMP400009626 ------------------------------------------------------------------------------------------------------------------------
    Solyc10g049650.1.1_S ------------------------------------------------------------------------------------------------------------------------
    Glyma07g14551.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g014488m_CI -----------------------------------------TSQSYQ---QNP-------------------------------------------------------------------
    Bradi4g06630.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    C.cajan_01900_CAJCA  -----------------------------------------SSQSH--------------------------------------------------------------------------
    GSVIVT01037858001_VI ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400009872 ------------DV---------------------------ASYSSS---HLP-------------------------------------------------------------------
    C.cajan_21844_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    ITC1587_Bchr3_P06352 ------------D-------------------------A----TSSS---ILPVRFVISLKFQESRVSCFLLDLEVDCRKDFWLAETGVPAFHPVFLVFWKFQESKVLGCFQSLGFLAFL
    Glyma01g45400.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Bradi5g23970.1_BRADI VA--ATPSSSSYSG-----------------------PTAPQLPCDS---LLP-------------------------------------------------------------------
    chr1.CM0088.530.r2.d ------------------------------------------------------------------------------------------------------------------------
    Sb08g016307.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    Os04g55480.1_ORYSA   VA--ATPSSSS-SG-----------------------PAAPQLASDC---LLP-------------------------------------------------------------------
    EG4P66602_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1002888 EDLDVDPDPGRWDGRSKGAGNGGVEARRRCAGAGGKLARQKAPGRQSGRQASG-------------------------------------------------------------------
    supercontig_106.73_C ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006523m_M -----------------------------------------ASQSSL---PNP-------------------------------------------------------------------
    Medtr4g114970.1_MEDT -----------------------------------------ASHSSL---PNS-------------------------------------------------------------------
    orange1.1g023654m_CI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g032009m_CI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomP ------SSSSS-SS-----------------------STNPQASSES---LLP-------------------------------------------------------------------
    Cc06_g08180_COFCA    -----------------------LLPPSVSSTAANPNSTPPTPSTTI---ANP-------------------------------------------------------------------
    MDP0000279102_MALDO  -----------------------------------------IRQSSL---PCX-------------------------------------------------------------------
    selmo_227454_SELMO   -------------------------------------------ISFG---SLP-------------------------------------------------------------------
    Cucsa.105760.1_CUCSA ------------DS------------------------SSSSSTSSS---ALP-------------------------------------------------------------------
    MLOC_18786.1_HORVU   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.800.r2.a ------------------------------------------------------------------------------------------------------------------------
    MDP0000191872_MALDO  ------------DA-----------------------DADVIPTSPS---NLP-------------------------------------------------------------------
    evm_27.model.AmTr_v1 --------------------------------------LSQHPGSVA---ELP-------------------------------------------------------------------
    ITC1587_BchrUn_rando ------SSSSS-SS-----------------------STNPQASSES---LLP-------------------------------------------------------------------
    LjSGA_019478.1_LOTJA --------------------------------------DATTTTAPP---SLP-------------------------------------------------------------------
    Ostta4_38022_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Cc11_g03280_COFCA    ------------EV------------------------G----SSSS---DLP-------------------------------------------------------------------
    AT2G14830.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    Glyma17g12120.1_GLYM -----------------------------------------SSHS---------------------------------------------------------------------------
    Potri.018G128100.1_P -----------------------------------------ASQKSSLPNPNP-------------------------------------------------------------------
    MDP0000335452_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Medtr6g012470.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1003072 ------------PP-----------------------AAAS----SS---RLP-------------------------------------------------------------------
    Cre10.g454400.t1.3_C AAMATAALAGKAGS-----------------------ATAPAATWASLLAPPP--------------------TAPAGNPAGAGTPAPEAALSQAAQARSAQTPPAQQARGAVGSVGAVT
    AT2G26000.2_ARATH    ------------NA-----------------------VSSSSSSSSS---NLP-------------------------------------------------------------------
    MDP0000255931_MALDO  -----------------------------------------IRQSSL---PCX-------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                850       860       870       880       890       900       910       920       930       940       950       960
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    Glyma13g22710.1_GLYM ---------TSLSSLLFILAVPNYLSFHDFIPFCGPH-LDRFHHLLFI-------------------------------------------------------------RND--------
    MA_10428609g0020_PIC ------------------------------------------------------------------------------------------------------------------------
    supercontig_46.26_CA ---------TSRSTSLFVVAVPNYLSSLDFIRFCGPH-IDNASEVLFI-------------------------------------------------------------RND--------
    Glyma09g17743.1_GLYM ------------------------MRYKNIQNL---------------------------------------------------------------------------------------
    orange1.1g015431m_CI ------------------------MTYADFCQFCASF-IQHILEMRIV-------------------------------------------------------------RTD--------
    MDP0000210436_MALDO  ------------------------------------------------------------------------------------------------------------------------
    MA_508435g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    Medtr2g104600.1_MEDT ---------VGRKPLACVLGVPNHMTYADFCQFCGSF-IQHILEMRIV-------------------------------------------------------------RME--------
    Potri.005G110500.1_P ---------VERKPLVAVVGVPNHMTYADFCQFCASF-IHHILEMRIV-------------------------------------------------------------RLD--------
    Millet_GLEAN_1001828 ---------PWRGTRLLVLAVPTRVSPDDFIRFCGPY-LERASDIRFI-------------------------------------------------------------RDD--------
    C.cajan_29736_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    MA_2413g0010_PICAB   ------------------------MTYADFCQFSGSF-IQNILEMRIV-------------------------------------------------------------RND--------
    cassava4.1_006182m_M ---------AGRKPSLSVLGVPNHMTYADFCQFCASF-LHHILEMRIV-------------------------------------------------------------RND--------
    Ostta4_34845_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Tc02_g010060_THECC   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.790.r2.a ---------SSSSLLLFILAVPNYLSFEDFIRFCNPH-LDHLHHLLFI-------------------------------------------------------------RND--------
    MDP0000313787_MALDO  ---------ASRSPMLFVVAVPNYLSFDDFIRFCGSH-VDHVLELVFI-------------------------------------------------------------RND--------
    MA_28767g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    supercontig_10.127_C ---------VGRKPLVCVLGVPNHMTYADFCQFCASF-IQHILEMRIV-------------------------------------------------------------RND--------
    28152.m000902_RICCO  ------------------------------------------------------------------------------------------------------------------------
    C.cajan_02948_CAJCA  ---------VGRKPLVCVVGVPNHMTYADFCQFCGSF-IQHMLEMRIV-------------------------------------------------------------RMD--------
    GRMZM2G066169_P03_ZE ---------LCRGTRLLVLAVPTRVSPEDFVRFCGPH-LECAADIRFI-------------------------------------------------------------RDD--------
    MA_85047g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Gorai.009G125800.1_G ---------VERKPLACVLGVPNHMTYADFCQFCASF-IHHISEMRIV-------------------------------------------------------------RND--------
    MDP0000304270_MALDO  ---------VGRKPLVCVLGVPNHMTYADFCQFCGSF-IQHILEMRIV-------------------------------------------------------------RND--------
    Phvul.002G052300.1_P ------------------------------------------------------------------------------------------------------------------------
    selmo_89370_SELMO    ------------------------------------------------------------------------------------------------------------------------
    Sb04g005670.1_SORBI  ---------VGRKPRVCVLAVPNHMTYADFCRFCGAF-VPHTLEMRIV-------------------------------------------------------------RTD--------
    GSVIVT01015569001_VI ---------TSRTTLLFVVAVPNYLSSDDFIRFCGSH-IDEVSELLVI-------------------------------------------------------------RND--------
    orange1.1g015426m_CI ------------------------MTYADFCQFCASF-IQHILEMRIV-------------------------------------------------------------RTD--------
    selmo_403400_SELMO   ---------SGRNEQLCILAVPSLMTGADLCQFTGSF-FQSIKEMRIV-------------------------------------------------------------RNE--------
    Ca_06690_CICAR       ---------NSLSSHLFIVAVPNYLSFDDFIRFCGPHHLDQFHRLLFI-------------------------------------------------------------RND--------
    Gorai.001G043700.1_G ---------SSRSTSLFVVAVPKYLSAADFIRFAGSH-IENITYILFI-------------------------------------------------------------WND--------
    GSVIVT01029385001_VI ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01013625001_VI ---------VGRKALVCVLGVPNHMTYADFCQFCGSF-IQHMLEMRIV-------------------------------------------------------------RND--------
    orange1.1g016340m_CI -------------------------SSNT------------------V-------------------------------------------------------------RND--------
    Solyc03g120000.2.1_S ---------VERKPLLCVLCVPNHMTYSDFCQFCGSF-VQHMLEMRIV-------------------------------------------------------------RND--------
    Medtr5g005150.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Potri.007G063900.1_P ---------VRRKPLVAVIGVPNHMTYADFCQFCASF-IDHILEMRIV-------------------------------------------------------------RLD--------
    Gorai.005G232800.1_G ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G005205_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G041561_P01_ZE ---------LGRKPRVCVLAVPNHMTYADFCRFCGAF-VPHTLEMRIV-------------------------------------------------------------RTD--------
    cassava4.1_008621m_M ---------SSRSTSLFIVAVPNYLSADDFIRFCESH-IDNVHELLFI-------------------------------------------------------------RND--------
    cassava4.1_033258m_M ---------DGRKPSLVCSWVPNHMTCADFCQFCASL-LHLILERELENDVICAIFRGKVRLVDVIIKVGCIKWISDFSVLFKCKAAGEDFVRKEELMGGRKQRKREHGRTD--------
    CMK309C_CYAME        RRHAKASMIFDQTTLLCMLGVPGYLSTADLAQFVAPF-RSRIRRMRIV-------------------------------------------------------------WDL--------
    MDP0000335450_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Phvul.003G167400.1_P ---------TSHSSLLFILAVPNYLSFHDFIPFCGPH-LDNFHHLLFI-------------------------------------------------------------RND--------
    AK251438.1_HORVU     ---------SWRGTRLLVLAVPTRVTPDDFVRFCGPY-VEHASEIRVI-------------------------------------------------------------SDD--------
    Phvul.005G181500.1_P ---------VGRKPLVCVVGVPNHMTYADFCQFSGSF-IQHMLEMRIV-------------------------------------------------------------RMD--------
    orange1.1g011525m_CI ---------NSRSTCIFVVAVPNYLSSDEFVRFCGSH-IDHVEELIFI-------------------------------------------------------------RND--------
    GSMUA_Achr3P13360_00 ---------VGRKPLVCVIAVPNHMTYADFCQFCGAF-IQRMFDMRIV-------------------------------------------------------------RTN--------
    evm_27.model.AmTr_v1 ---------EGRSTLVCVLAVPNHITYAEFFQFSGSF-AEHMLEMRVI-------------------------------------------------------------RND--------
    Pp1s40_296V6.1_PHYPA ---------EGRSERLCVLAVPNHMTGADFCQFTGAF-IENIKEMRFV-------------------------------------------------------------RND--------
    Ca_02909_CICAR       ---------VGRKPLACVVGVPNHMTYADFCQFCGSF-IHHILEMRIV-------------------------------------------------------------RMD--------
    Tc00_g032110_THECC   ---------VERKPLVCVLGVPNHMTYADFCQFCASF-IHHILEMRIV-------------------------------------------------------------RND--------
    Cc02_g19690_COFCA    ------------------------------------------------------------------------------------------------------------------------
    MDP0000266286_MALDO  ---------ASRSPILFVVAVPNYLSFDDFIRFCGSR-IDHVLELVFI-------------------------------------------------------------RND--------
    EG4P66601_ELAGV      ---------AGRGTLLFVLAVPSRLSPEDFLRFCGSY-VERSSEVRVI-------------------------------------------------------------R----------
    Solyc07g008050.2.1_S ---------ISRTTTVFIVAAPNYLSPDDFLLFCGTH-LADFTHVMFL-------------------------------------------------------------KND--------
    Cucsa.132280.1_CUCSA ---------SSQSTILFVVAVPNYLSYDDFVTFCGSR-INHVSELLFI-------------------------------------------------------------RND--------
    Pp1s14_283V6.1_PHYPA ------------------------------------------------------------------------------------------------------------------------
    EG4P15130_ELAGV      ----------------FMPGVPTPITSEAVDQ-------QAVEVIRYL------------------------------------------------------------------------
    orange1.1g018432m_CI ---------NSRSTCIFVVAVPNYLSSDEFVRFCGSH-IDHVEELIFI-------------------------------------------------------------RND--------
    Ostta4_35565_OSTTA   ---------MAHATLDVELSDRAALALRQLVNVHG-------------------------------------------------------------------------------------
    Os02g09060.1_ORYSA   ---------VGRKPRVCVPGVPNHLTYADFGRFCASW-ASHILETRII-------------------------------------------------------------RID--------
    PGSC0003DMP400053855 ---------ISRTTTVFIVAAPNYLSPDDFLLFCGTH-LADFTHVMFL-------------------------------------------------------------KND--------
    27446.m000481_RICCO  ---------VERKPLVCVIGVPNHMTYADFCQFCASF-IPHISEMRIV-------------------------------------------------------------RND--------
    Potri.009G090100.1_P ------------------------------------------------------------------------------------------------------------------------
    PDK_30s766901g002_PH ------------------------MTYADFCQFCGSF-IQHMLEMRIV-------------------------------------------------------------RND--------
    29927.m000605_RICCO  ---------NCRPTSLFVVAVPNYLSADDFIRFCESH-TEKVHEVLFI-------------------------------------------------------------RND--------
    AT2G42160.1_ARATH    ---------SSRSTTLFIVAVPNYLSSLDFIRFCDSR-ISQVSDILFI-------------------------------------------------------------RND--------
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    MA_494524g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    MA_79946g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1001547 ------------------------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P30140_00 ------------------------------------------------------------------------------------------------------------------------
    orange1.1g019425m_CI ---------NSRSTCIFVVAVPNYLSSDEFVRFCGSH-IDHVEELIFI------------------------------------------------------------------------
    Glyma15g00770.2_GLYM ---------VGRKPLVCVVGVPNHMTYADFCQFCGSF-IQHMLEMRIV-------------------------------------------------------------RMD--------
    orange1.1g014500m_CI ---------NSRSTCIFVVAVPNYLSSDEFVRFCGSH-IDHVEELIFI-------------------------------------------------------------RND--------
    Sb06g030620.1_SORBI  ---------ACRGTRLLVLAVPTRVSPDDFVRFCGPC-LDRASDIRFI-------------------------------------------------------------RDD--------
    PDK_30s709101g009_PH ---------AGRGTLLFVLAVPSRLSPEDFLRFCGSY-VERSSEIRVI-------------------------------------------------------------RND--------
    GRMZM5G896756_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    Os12g32374.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_018065m_M ------------------------------------------------------------------------------------------------------------------------
    Bradi3g06180.1_BRADI ---------VGRKPWVCVPAVPNHMTYADFCRFCGAF-VPHMLEMRIV-------------------------------------------------------------RID--------
    PGSC0003DMP400009626 ------------------------------------------------------------------------------------------------------------------------
    Solyc10g049650.1.1_S -------------------------------------------------------------------------------------------------------------------MTPLI
    Glyma07g14551.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g014488m_CI ---------NSRSTCIFVVAVPNYLSSDEFVRFCGSH-IDHVEELIFI-------------------------------------------------------------RND--------
    Bradi4g06630.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    C.cajan_01900_CAJCA  ---------SSHSSLLLVLAVPNYLSFHDFILFCGPH-LDPLHHLLFI-------------------------------------------------------------RND--------
    GSVIVT01037858001_VI ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400009872 ---------VERKPLLCVLCVPNHMTYSDFCQFCGSF-VQHMLEMRIV-------------------------------------------------------------RND--------
    C.cajan_21844_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    ITC1587_Bchr3_P06352 DLGEVGCKRVGRKPLVCVIAVPNHMTYADFCQFCGAF-IQHMFDMRIV-------------------------------------------------------------RTN--------
    Glyma01g45400.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Bradi5g23970.1_BRADI ---------SWRGTRLLVLAVPTRVSSDDFVRFCGPY-VEHASDIRVI-------------------------------------------------------------SDD--------
    chr1.CM0088.530.r2.d ------------------------------------------------------------------------------------------------------------------------
    Sb08g016307.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    Os04g55480.1_ORYSA   ---------PWRGTRLLVLAVPTHVSPDDFVRFCGPY-IEHASDIHVV-------------------------------------------------------------RDD--------
    EG4P66602_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1002888 ---------AMRGMDLLVLANPSWLSAEEFIAFCGNR-IKDATEIRII------------------------------------------------------------------------
    supercontig_106.73_C ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006523m_M ---------SSRSTSLFIVAVPNYLSADDFIRFCESH-IDNVHELLFI-------------------------------------------------------------RND--------
    Medtr4g114970.1_MEDT ---------NSLSPLLFILAVPNYFSFDDFIRFCGPHYLDRLHHLLFI-------------------------------------------------------------RND--------
    orange1.1g023654m_CI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g032009m_CI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomP ---------AVRGTLLLILAVPSRLSPEDLLRFCGSY-VERSSAIRVI-------------------------------------------------------------RND--------
    Cc06_g08180_COFCA    ---------TARTTQIFIVAVPNYLSSDDFLLFCGTH-VDHFLEILFV-------------------------------------------------------------RND--------
    MDP0000279102_MALDO  ---------ASRSPILFVVAVPNYLSFDDFIRFCGSR-IDHVLELVFI-------------------------------------------------------------RND--------
    selmo_227454_SELMO   ---------DERSENLCVLGVPSAIEPAEFFQIASSF-SDKIEKLQCI-------------------------------------------------------------RND--------
    Cucsa.105760.1_CUCSA ---------VERKPLVCVLGVPNHMTYADFCQFCGSF-IHEILEMRVV-------------------------------------------------------------RGD--------
    MLOC_18786.1_HORVU   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.800.r2.a ------------------------------------------------------------------------------------------------------------------------
    MDP0000191872_MALDO  ---------VGRKPLVCVLGVPNHMTYADFCQFCGSF-IQHILEMRIV-------------------------------------------------------------RND--------
    evm_27.model.AmTr_v1 ---------SGRNSLVCVLAVPNHMTYADFCQFCGSF-IQHISEMRIV-------------------------------------------------------------RND--------
    ITC1587_BchrUn_rando ---------AVRGTLLLILAVPSRLSPEDLLRFCGSY-VERSSAIRVI-------------------------------------------------------------RND--------
    LjSGA_019478.1_LOTJA ---------VDRKPLVCVVGVPNHMTYADFCQFCGSF-IHHILEMRIV-------------------------------------------------------------RMD--------
    Ostta4_38022_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Cc11_g03280_COFCA    ---------VERKPLLCVLGVPNHMTYADFCQFCGSF-IHHMLEMRIV-------------------------------------------------------------RND--------
    AT2G14830.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    Glyma17g12120.1_GLYM ----------SPSSLLFILAVPNYLSFHDFIPFCGPH-LDRLHHLLFI-------------------------------------------------------------RND--------
    Potri.018G128100.1_P ---------NSRSTSLFVVAVPNYFSEDDFIRFCGSH-IDHVHVLLFI-------------------------------------------------------------RND--------
    MDP0000335452_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Medtr6g012470.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1003072 ---------VGRKPRVCVLAVPNHMTYADFCRFCGAF-VPHTLEMRIV-------------------------------------------------------------RTD--------
    Cre10.g454400.t1.3_C SAGAGGGGGGERCTELCCLALPSDMTIADFCTFLGAH-LLRLRRMRVL-------------------------------------------------------------RRQVGSVGHAA
    AT2G26000.2_ARATH    ---------IGRNPLVCVLGVPNHMTYADFCQFCGSF-IQHILDMRTV-------------------------------------------------------------RND--------
    MDP0000255931_MALDO  ---------ASRSPILFVVAVPNYLSFDDFIRFCGSR-IDHVLELVFI-------------------------------------------------------------RND--------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                970       980       990      1000      1010      1020      1030      1040      1050      1060      1070      1080
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    Glyma13g22710.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    MA_10428609g0020_PIC ------------------------------------------------------------------------------------------------------------------------
    supercontig_46.26_CA ------------------------------------------------------------------------------------------------------------------------
    Glyma09g17743.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g015431m_CI ------------------------------------------------------------------------------------------------------------------------
    MDP0000210436_MALDO  ----------------------------MA--------A---------------------------------------------------------------------------------
    MA_508435g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    Medtr2g104600.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Potri.005G110500.1_P ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1001828 ------------------------------------------------------------------------------------------------------------------------
    C.cajan_29736_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    MA_2413g0010_PICAB   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006182m_M ------------------------------------------------------------------------------------------------------------------------
    Ostta4_34845_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Tc02_g010060_THECC   ----------------------------MA--------D---------------------------------------------------------------------------------
    chr4.CM0003.790.r2.a ------------------------------------------------------------------------------------------------------------------------
    MDP0000313787_MALDO  ------------------------------------------------------------------------------------------------------------------------
    MA_28767g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    supercontig_10.127_C ------------------------------------------------------------------------------------------------------------------------
    28152.m000902_RICCO  ----------------------------MA--------N---------------------------------------------------------------------------------
    C.cajan_02948_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G066169_P03_ZE ------------------------------------------------------------------------------------------------------------------------
    MA_85047g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Gorai.009G125800.1_G ------------------------------------------------------------------------------------------------------------------------
    MDP0000304270_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Phvul.002G052300.1_P ----------------------------MA--------S---------------------------------------------------------------------------------
    selmo_89370_SELMO    ------------------------------------------------------------------------------------------------------------------------
    Sb04g005670.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01015569001_VI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g015426m_CI ------------------------------------------------------------------------------------------------------------------------
    selmo_403400_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Ca_06690_CICAR       ------------------------------------------------------------------------------------------------------------------------
    Gorai.001G043700.1_G ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01029385001_VI ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01013625001_VI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g016340m_CI ------------------------------------------------------------------------------------------------------------------------
    Solyc03g120000.2.1_S ------------------------------------------------------------------------------------------------------------------------
    Medtr5g005150.1_MEDT ----------------------------MA------------------------------------------------------------------------------------------
    Potri.007G063900.1_P ------------------------------------------------------------------------------------------------------------------------
    Gorai.005G232800.1_G ----------------------------MA--------N---------------------------------------------------------------------------------
    GRMZM2G005205_P02_ZE ----------------------------MS--------S---------------------------------------------------------------------------------
    GRMZM2G041561_P01_ZE ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_008621m_M ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_033258m_M ------------------------------------------------------------------------------------------------------------------------
    CMK309C_CYAME        ------------------------------------------------------------------------------------------------------------------------
    MDP0000335450_MALDO  ----------------TLSRVRLSRCSSMA--------A---------------------------------------------------------------------------------
    Phvul.003G167400.1_P ------------------------------------------------------------------------------------------------------------------------
    AK251438.1_HORVU     ------------------------------------------------------------------------------------------------------------------------
    Phvul.005G181500.1_P ------------------------------------------------------------------------------------------------------------------------
    orange1.1g011525m_CI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P13360_00 ------------------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    Pp1s40_296V6.1_PHYPA ------------------------------------------------------------------------------------------------------------------------
    Ca_02909_CICAR       ------------------------------------------------------------------------------------------------------------------------
    Tc00_g032110_THECC   ------------------------------------------------------------------------------------------------------------------------
    Cc02_g19690_COFCA    ----------------------------MS--------S---------------------------------------------------------------------------------
    MDP0000266286_MALDO  ------------------------------------------------------------------------------------------------------------------------
    EG4P66601_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Solyc07g008050.2.1_S ------------------------------------------------------------------------------------------------------------------------
    Cucsa.132280.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    Pp1s14_283V6.1_PHYPA ------------------------------------------------------------------------------------------------------------------------
    EG4P15130_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    orange1.1g018432m_CI ------------------------------------------------------------------------------------------------------------------------
    Ostta4_35565_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Os02g09060.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400053855 ------------------------------------------------------------------------------------------------------------------------
    27446.m000481_RICCO  ------------------------------------------------------------------------------------------------------------------------
    Potri.009G090100.1_P ----------------------------MA--------N---------------------------------------------------------------------------------
    PDK_30s766901g002_PH ------------------------------------------------------------------------------------------------------------------------
    29927.m000605_RICCO  ------------------------------------------------------------------------------------------------------------------------
    AT2G42160.1_ARATH    ------------------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    MA_494524g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    MA_79946g0010_PICAB  ----------------------------MG------------------------------------------------------------------------------------------
    Millet_GLEAN_1001547 ----------------------------MS--------S---------------------------------------------------------------------------------
    ITC1587_BchrUn_rando ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P30140_00 ----------------------------MA--------A---------------------------------------------------------------------------------
    orange1.1g019425m_CI ------------------------------------------------------------------------------------------------------------------------
    Glyma15g00770.2_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g014500m_CI ------------------------------------------------------------------------------------------------------------------------
    Sb06g030620.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    PDK_30s709101g009_PH ------------------------------------------------------------------------------------------------------------------------
    GRMZM5G896756_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    Os12g32374.1_ORYSA   ----------------------------MSSSSSAAAGA---------------------------------------------------------------------------------
    cassava4.1_018065m_M ----------------------------MA--------N---------------------------------------------------------------------------------
    Bradi3g06180.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400009626 ----------------------------MA--------T---------------------------------------------------------------------------------
    Solyc10g049650.1.1_S EVKKKKREWKSVISGSPFQLRPCNSFRSMA--------T---------------------------------------------------------------------------------
    Glyma07g14551.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g014488m_CI ------------------------------------------------------------------------------------------------------------------------
    Bradi4g06630.1_BRADI ----------------------------MS------SAA---------------------------------------------------------------------------------
    C.cajan_01900_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01037858001_VI ----------------------------MA--------N---------------------------------------------------------------------------------
    PGSC0003DMP400009872 ------------------------------------------------------------------------------------------------------------------------
    C.cajan_21844_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    ITC1587_Bchr3_P06352 ------------------------------------------------------------------------------------------------------------------------
    Glyma01g45400.1_GLYM ----------------------------MA------------------------------------------------------------------------------------------
    Bradi5g23970.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    chr1.CM0088.530.r2.d ----------------------------MA--------S---------------------------------------------------------------------------------
    Sb08g016307.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    Os04g55480.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    EG4P66602_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1002888 ------------------------------------------------------------------------------------------------------------------------
    supercontig_106.73_C ----------------------------ME--------N---------------------------------------------------------------------------------
    cassava4.1_006523m_M ------------------------------------------------------------------------------------------------------------------------
    Medtr4g114970.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    orange1.1g023654m_CI ----------------------------MATYSSKLPENGPEDEDEMMIGGELGWVRHLASCDHLVASLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNH
    orange1.1g032009m_CI ----------------------------MA--------T---------------------------------------------------------------------------------
    GSMUA_AchrUn_randomP ------------------------------------------------------------------------------------------------------------------------
    Cc06_g08180_COFCA    ------------------------------------------------------------------------------------------------------------------------
    MDP0000279102_MALDO  ------------------------------------------------------------------------------------------------------------------------
    selmo_227454_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Cucsa.105760.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    MLOC_18786.1_HORVU   ----------------------------MS------------------------------------------------------------------------------------------
    chr4.CM0003.800.r2.a ------------------------------------------------------------------------------------------------------------------------
    MDP0000191872_MALDO  ------------------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando ------------------------------------------------------------------------------------------------------------------------
    LjSGA_019478.1_LOTJA ------------------------------------------------------------------------------------------------------------------------
    Ostta4_38022_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Cc11_g03280_COFCA    ------------------------------------------------------------------------------------------------------------------------
    AT2G14830.2_ARATH    ----------------------------MA--------E---------------------------------------------------------------------------------
    Glyma17g12120.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Potri.018G128100.1_P ------------------------------------------------------------------------------------------------------------------------
    MDP0000335452_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Medtr6g012470.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1003072 ------------------------------------------------------------------------------------------------------------------------
    Cre10.g454400.t1.3_C AAAAMTAASAVAASTGAAAAAAAAAPSTASTAAEGAEAAPARAGGRAGMAAPVAAAAPEGPTPARHTSAAASPAGAGADASAGAGAGATAAAAAAPTSRGSGSAAPTAAAAATAAAQQHG
    AT2G26000.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    MDP0000255931_MALDO  ------------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                               1090      1100      1110      1120      1130      1140      1150      1160      1170      1180      1190      1200
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    Glyma13g22710.1_GLYM ---------------------------------------------GTEDRYS-------------------------------VLIEFADHFAADAFFTNFNAKKFSPAEAE-VCHILFL
    MA_10428609g0020_PIC ------------------------------------------------------------------------------------------------------------------------
    supercontig_46.26_CA ---------------------------------------------GMEDRYS-------------------------------VLMKFVDQSKADGFYSSLNGKRFSPSEAE-VCHILFA
    Glyma09g17743.1_GLYM ---------------------------------------------------------------------------------------------------NFNYRQISTSTVG--CIAYNI
    orange1.1g015431m_CI ---------------------------------------------GMDDQYS-------------------------------VLIRFDSQDSADKFYQHFNGRQFNSLEEE-VCHVLFT
    MDP0000210436_MALDO  ----------------------------------------QAG---SS----------------SAQEDQ----FL---------------ENEEDL---FYGAESGWVEAR--------
    MA_508435g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    Medtr2g104600.1_MEDT ---------------------------------------------SMEDRYS-------------------------------VLIRFDEQDSTDAFYTHYNGRRFSSLEVE-VCRVVFT
    Potri.005G110500.1_P ---------------------------------------------GMEDRYS-------------------------------ILIRFDTQDSTDKFYLHFNGRQFNSLEEE-VCRVLFT
    Millet_GLEAN_1001828 ---------------------------------------------GVEDRYS-------------------------------VLVEFEDQKSADGFYLDLNGWRFSSSEGE--------
    C.cajan_29736_CAJCA  -------------------------------------------------------------------------------------------EED--------GSESGWVAAR--------
    MA_2413g0010_PICAB   ---------------------------------------------GLNERYS-------------------------------ILMTFDNQKSADDFYRHYNRRPFSSLEAE-ICHVLFI
    cassava4.1_006182m_M ---------------------------------------------GMEDQYS-------------------------------ILIQFENQDSTDRFFQHFNGRQFNSLEED-VCRVLFI
    Ostta4_34845_OSTTA   ---------------------------------------------RASGTYD-------------------------------VVLEFDRDADAEAFVENYHGRRLRASSAE-TCAAVRV
    Tc02_g010060_THECC   ----------------------------------------QAG---AS----------------SSHLKI----ILEE-------------EDDYDL---IYGAESGWVEAR--------
    chr4.CM0003.790.r2.a ---------------------------------------------GMEDRYS-------------------------------VLIEFHDQVTADGFYSNFNGKKFSPGEAE-LCHILSL
    MDP0000313787_MALDO  ---------------------------------------------GMEDRYS-------------------------------VLIECKSQDAAGEFYSIFNGRKYSPGEAE-VCHILFL
    MA_28767g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    supercontig_10.127_C ---------------------------------------------GVEDRYS-------------------------------VLIRFDSQDSTDKFYQHFSGRQFNSLEVE-VCHVLFT
    28152.m000902_RICCO  ----------------------------------------QAAASGSS----------------SPSPHL----GL---------------EEDDEL-MTVYGSESGWVEAK--------
    C.cajan_02948_CAJCA  ---------------------------------------------GMEDQYS-------------------------------VLIRFDHQDSTDAFYNHYNARRFSSLEVE-VCRVLFT
    GRMZM2G066169_P03_ZE ---------------------------------------------GVEDRYS-------------------------------VLVEFEDQSSAEWFYADLNGWRFSTSESE-VCHVLFI
    MA_85047g0010_PICAB  ----------------------------------------------------------------------------------------MASPSTSSVQEQSYGSASGWVEAR--------
    Gorai.009G125800.1_G ---------------------------------------------GMEDRYS-------------------------------VLIRFDSQDSTDKFYQHFNNRQFNSLEEE-LCRVLFT
    MDP0000304270_MALDO  ---------------------------------------------GMEDRYS-------------------------------ILIRFDSQDSTDNFYKHFNGRRFSSLEVE-VCRILFT
    Phvul.002G052300.1_P ----------------------------------------------SS----------------SAPGGL----GLS--------------EEDYEV---MYGSESGWVEAR--------
    selmo_89370_SELMO    ------------------------------------------------------------------------------------------------------GEDSGWVEAR--------
    Sb04g005670.1_SORBI  ---------------------------------------------GAEDQYS-------------------------------VLINFDTQSSTDSFYKHFNGKQFSSLEGD-VCQVRFV
    GSVIVT01015569001_VI ---------------------------------------------AVEDRYS-------------------------------VVIKFMNQLYADAFYCIFNGKRFSPGEAE-VCHLLFM
    orange1.1g015426m_CI ---------------------------------------------GMDDQYS-------------------------------VLIRFDSQDSADKFYQHFNGRQFNSLEEE-VCHVLFT
    selmo_403400_SELMO   ---------------------------------------------TSKDRYS-------------------------------VVMKFEDQISADEFFRHFNGRPFSSLQEQ-ICHVLFV
    Ca_06690_CICAR       ---------------------------------------------GMEDRYS-------------------------------VLIEFVDQLAADGFHSNFDGKKFSPGEAE-ICHILFL
    Gorai.001G043700.1_G ---------------------------------------------GVEDRYS-------------------------------VLIELAAQSAADAFYFSLNGKRFSPAEAE-LCHILFT
    GSVIVT01029385001_VI ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01013625001_VI ---------------------------------------------GIEDQYS-------------------------------ILIRFDNQSSADNFCKHFNGRRFSSLEVD-VCRVLFT
    orange1.1g016340m_CI ---------------------------------------------AMEDRYS-------------------------------VLIKLVDQLTADEFYSNLNGKRFSPAEAE-VCHMLFM
    Solyc03g120000.2.1_S ---------------------------------------------GMEDCYS-------------------------------ILIRFDEQKAADTFHKHFSGRRFSSLEEE-TCDVLFA
    Medtr5g005150.1_MEDT ----------------------------------------------SS----------------SSQPEG----GLS--------------EEDYDL---IHGSQSGWVDAR--------
    Potri.007G063900.1_P ---------------------------------------------GMEDQYS-------------------------------ILIRFDTQDSTDKFYLHFNGRQYNSLEEE-VCQVLFT
    Gorai.005G232800.1_G ----------------------------------------RAG---SS----------------SSRLET----LH---------------EEDDYD---SYGAESGWVEAK--------
    GRMZM2G005205_P02_ZE ----------------------------------------AADEDALS----------------SDKGKKREEDGTDGRSQRQE--GVEVADGKVDL-GDLYGAAAGWVEAR--------
    GRMZM2G041561_P01_ZE ---------------------------------------------GAEDQYS-------------------------------VLINFDTQSSTDSFYKHFNGKQFSSLEGG-VCHVRFV
    cassava4.1_008621m_M ---------------------------------------------GMEDRYS-------------------------------VLIKLNDQLTADGFYGNFNGKRFSPAE----------
    cassava4.1_033258m_M ---------------------------------------------GMEDQYS-------------------------------ILISFDSQDSTDSFHQHLNGRQVNSLEED-NCCVLFI
    CMK309C_CYAME        ---------------------------------------------SYSNSYA-------------------------------VLLRFLSPDDAVLFRMEYDGRAFSEALAPERCRVLPV
    MDP0000335450_MALDO  ----------------------------------------QAG---SS----------------SAQEDQ----FL---------------ENEEDL---FYGAESGWVEAR--------
    Phvul.003G167400.1_P ---------------------------------------------GTEDRYS-------------------------------VLIKFADQFAADEFYSYFNGKKFSPAEAE-VCHILFL
    AK251438.1_HORVU     ---------------------------------------------GVEDRYS-------------------------------VLVEFDDQKSADGFYLDLNGWRFSSSEVE-VCHVLFI
    Phvul.005G181500.1_P ---------------------------------------------GMEDQYS-------------------------------VLIRFDSQESTDTFYKHYHGRRFSSLEVE-VCRVLFT
    orange1.1g011525m_CI ---------------------------------------------AMEDRYS-------------------------------VLIKLVDQLTADEFYSNLNGKRFSPAEAE-VCHMLFM
    GSMUA_Achr3P13360_00 ---------------------------------------------GVEDQYS-------------------------------VIIRFDDQTSADEFYQHFNGRSFSSLEGD-ICSVHYT
    evm_27.model.AmTr_v1 ---------------------------------------------GMDDRYS-------------------------------VLVMFENQNSTDGFFRHCNGRRFSSVEAE-VCHVLFT
    Pp1s40_296V6.1_PHYPA ---------------------------------------------GQTDRYS-------------------------------VLMTFDSLQLADDFYQHYNLKPFSSLEAE-LCHVLYT
    Ca_02909_CICAR       ---------------------------------------------FMEDRYS-------------------------------VLIRFDQQHSTDAFYNHYNGRRFSSLEDE-MCRVVFT
    Tc00_g032110_THECC   ---------------------------------------------GMEDRYS-------------------------------VLIRFDSQDSTDKFYQHFNNRQFNSLEEE-VCRVLFT
    Cc02_g19690_COFCA    ----------------------------------------SKEAA-SS----------------SHIVEE---------------------DDDELL---LYGSGSGWVEAL--------
    MDP0000266286_MALDO  ---------------------------------------------GMEDRYS-------------------------------VLIECKNRDTAGEFYSTFNGRKYSPGEAE-LCHILFL
    EG4P66601_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Solyc07g008050.2.1_S ---------------------------------------------GIEHSYS-------------------------------VLINIVNQLAADGFYCSFNGKRFKPTEVE-VCHIYFI
    Cucsa.132280.1_CUCSA ---------------------------------------------GVEERYS-------------------------------VLIKLGNLIDADKFFSNLNGKKFSPSEAE-VCHILFL
    Pp1s14_283V6.1_PHYPA -------------------------------------------------------------------------------------MASGSTTAGEETGYDFVGEISGWVEAY--------
    EG4P15130_ELAGV      ---------------------------------------------GMVGRQA-----------------------------------LRFPPGGSYALPEWLDRRYKTVIAD-IDECISQ
    orange1.1g018432m_CI ---------------------------------------------AMEDRYS-------------------------------VLIKLVDQLTADEFYSNLNGKRFSPAEAE-VCHMLFM
    Ostta4_35565_OSTTA   -------------------------------------------------------------------------------------FDVQSALTAVSTLETSGETSESSLEVDVKRCVDYM
    Os02g09060.1_ORYSA   ---------------------------------------------GVEDQYG-------------------------------VLIKFDTQSFTDSFYMSFNGNRFSSLEGN-VCRVRFV
    PGSC0003DMP400053855 ---------------------------------------------GIEHSYS-------------------------------VLINIVNQLAADGFYCSFNGKRFKPTEVE-VCHIYFI
    27446.m000481_RICCO  ---------------------------------------------GMEDRYS-------------------------------ILIRFDSQESTDKFYQHFNGRQFNSLEED-VCRVLFT
    Potri.009G090100.1_P ----------------------------------------QAGA--SS----------------SAPLEP----GF---------------EDDEND---MYGAESGWVEAR--------
    PDK_30s766901g002_PH ---------------------------------------------GMEDQYS-------------------------------VLIRFDNQSSTDGFYKHFNGRQFSSLEID-ICRVHYA
    29927.m000605_RICCO  ---------------------------------------------GMEDRYS-------------------------------VLIKLNNQVTADRFYESFNGKRFSPAEAE-VCHILFV
    AT2G42160.1_ARATH    ---------------------------------------------GMEDRYS-------------------------------VLITFSDQSEADGFYNNLNGKKFAPSEAE-VCHILYV
    evm_27.model.AmTr_v1 -------------------------------------------------------------------------------------MAEESSSSVTPFLPEIYGSDSGWVEAR--------
    MA_494524g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    MA_79946g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1001547 ----------------------------------------AAGEDSSS----------------SRKGKEKEDAG----ARREE--AVEVAEGEVDL-GDLYGAAAGWVEAR--------
    ITC1587_BchrUn_rando ---------------------------------------------------------------------------------------------------FLHGR----------------
    GSMUA_Achr3P30140_00 ----------------------------------------EGG---SS----------------SGTREV----V----------------EDD------FFGAESGWVEAR--------
    orange1.1g019425m_CI ------------------------------------------------------------------------------------------------------------------------
    Glyma15g00770.2_GLYM ---------------------------------------------GMEDQYS-------------------------------VLVRFDDQDSTDSFYKHYNGRRFSSLEVE-VCRVLFT
    orange1.1g014500m_CI ---------------------------------------------AMEDRYS-------------------------------VLIKLVDQLTADEFYSNLNGKRFSPAEAE-VCHMLFM
    Sb06g030620.1_SORBI  ---------------------------------------------GVEDRYS-------------------------------VLVEFEDQNSAERFYADLNGWRFSTSEVS--------
    PDK_30s709101g009_PH ---------------------------------------------ALEDRYS-------------------------------VLVGFDDQKKADGFYLDLNGWRFTSAEGE-VCHILFV
    GRMZM5G896756_P02_ZE ---------------------------------------------GVE------------------------------------------VADGKLDLGDLYGAAAGWVEAR--------
    Os12g32374.1_ORYSA   ----------------------------------------GSGEPSST----------------SRPGKERED-GGDGGGRKE-------GEGGADF--DLAGAAAGWVEAR--------
    cassava4.1_018065m_M ----------------------------------------KAAGS-SS----------------STSLGQ----GF---------------EDEDELMMTIKGSESGWVEAR--------
    Bradi3g06180.1_BRADI ---------------------------------------------GADDQYS-------------------------------VLIKFDTLSSTDSFYKHFNGKRFSSMEGD-VSRVRFV
    PGSC0003DMP400009626 ----------------------------------------GT----SS----------------SSLLPI----DE---------------EDEILM---LYGSESGWVEAK--------
    Solyc10g049650.1.1_S ----------------------------------------GT----SS----------------SSSLPA----DEE--------------EEEILM---LYGSESGWVEAK--------
    Glyma07g14551.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g014488m_CI ---------------------------------------------AMEDRYS-------------------------------VLIKLVDQLTADEFYSNLNGKRFSPAEAE-VCHMLFM
    Bradi4g06630.1_BRADI ----------------------------------------GAGEPSSS----------------SRPGKERED-GGEESNRKEEDQGTAVAEGDVDL--ELYGAASGWVEAR--------
    C.cajan_01900_CAJCA  ---------------------------------------------GTEDRYS-------------------------------VLLHFVDQFAADQFHTNFNAKKFSPAEAE-VCHILFL
    GSVIVT01037858001_VI ----------------------------------------QAS---SS----------------STALEV----LI----------------EDEEF---LYGAESGWVEAR--------
    PGSC0003DMP400009872 ---------------------------------------------GMEDCYS-------------------------------ILIRFDEQKAADTFHKHFSGRRFSSLEEE-TCNVLFA
    C.cajan_21844_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    ITC1587_Bchr3_P06352 ---------------------------------------------GVEDQYS-------------------------------VIIRFDDQTSADGFYQHFNGRRFSSLEGD-ICSVHYT
    Glyma01g45400.1_GLYM ----------------------------------------------SS----------------SSYPRT---------------------EGEE-----EYGSESGWVDAR--------
    Bradi5g23970.1_BRADI ---------------------------------------------GVEDRYS-------------------------------VLVEFEDQKSADGFYLDLNGWRFSSSEVE-VCHVLFI
    chr1.CM0088.530.r2.d ----------------------------------------------SSSSSSCPQPQVLSSLLVSNPNSS---------ASEFHSYYSKHFNIQEEA---DYGSESGWVDAR--------
    Sb08g016307.1_SORBI  --------------------------------------------------------------------------------------------GGVDL-GDLYGAAAGWVAAR--------
    Os04g55480.1_ORYSA   ---------------------------------------------GVEDRYS-------------------------------VLVEFEDQKSADGFYLDLNGWRFSSSEVE-VCHVLFI
    EG4P66602_ELAGV      ----------------------------------------------MEDRYS-------------------------------VLVGFDDQKKADGFYLDLNGWRFTSAEGE-VCHILFV
    Millet_GLEAN_1002888 ------------------------------------------------------------------------------------------------------------------------
    supercontig_106.73_C ----------------------------------------QAA---SS----------------SSPLEL----QLA--------------DEDEEF---IYGAESGWVDAL--------
    cassava4.1_006523m_M ---------------------------------------------GMEDRYS-------------------------------VLIKLNDQLTADGFYGNFNGKRFSPAEAE-ICHILFV
    Medtr4g114970.1_MEDT ---------------------------------------------GMEDRYS-------------------------------VLIRFDDQLAADAFHTYFNGKKFSPAEAE-ICHILFL
    orange1.1g023654m_CI SVALDYSDLSVWCFACHAYLNAQAILQLRPVHETSYVLKFGRALPFNT----------------GQHPKV---------------------KEDDEM---MLGAESGSVRHL--------
    orange1.1g032009m_CI ----------------------------------------------SS----------------STQLEN----RP---------------EEEDEM---MFGAESGWVEPL--------
    GSMUA_AchrUn_randomP ---------------------------------------------GIEDRYS-------------------------------VLVEFDDQKSADGFYLDVNGWRF-STEGE-VCHILFI
    Cc06_g08180_COFCA    ---------------------------------------------AVEDRYS-------------------------------VLISLANQLAADGFYCSFNGKRFRPSEAE-VCHIYFT
    MDP0000279102_MALDO  ---------------------------------------------GMEDRYS-------------------------------VLIECKNRDTAGEFYSTFNGRKYSPGEAE-LCHILFL
    selmo_227454_SELMO   ---------------------------------------------TSQ---I-------------------------------MVLQFDSQSSADAFYHCFD-VDLLPLKNA-ICHVLYT
    Cucsa.105760.1_CUCSA ---------------------------------------------GMEDRYS-------------------------------ILIRFRSQDSADNFYKHLNEKRYSSLEAE-VCHLLFM
    MLOC_18786.1_HORVU   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.800.r2.a ------------------------------------------------------------------------------------------------------------------------
    MDP0000191872_MALDO  ---------------------------------------------GMEDRYS-------------------------------ILIRFDSQDSTDNFYKHFNGRRFSSLEVE-VCRILFT
    evm_27.model.AmTr_v1 ---------------------------------------------GADDRYS-------------------------------VLIRFDNQNSADNFYHHFNGKLFSSLEVE-VCHVLFT
    ITC1587_BchrUn_rando ---------------------------------------------GIEDRYS-------------------------------VLVEFDDQKSADGFYLDVNGWRF-STEGE-VCHILFI
    LjSGA_019478.1_LOTJA ---------------------------------------------GMEDHYS-------------------------------VLIRFDVNSGICSILSTHSQWYVEE-----VYVFLFN
    Ostta4_38022_OSTTA   -----------------------------------------------------------------------------------------------------------------------M
    Cc11_g03280_COFCA    ---------------------------------------------GMEDNYS-------------------------------VLIRFDDQSSADNFYKHFNGKCFSSLEVE-ICRVLFT
    AT2G14830.2_ARATH    ----------------------------------------KAPSSSSS----------------SSPPKE----VA---------------DETQDW---ILGAGSGWVEAR--------
    Glyma17g12120.1_GLYM ---------------------------------------------GTEDRYS-------------------------------VLIEFADHFAADAFYTNFNAKKFSPAEAE-VCHILFL
    Potri.018G128100.1_P ---------------------------------------------GMEDRYS-------------------------------VLIKLDNQVTADRFYNSFNEKRFSPSEAE-ICHILYV
    MDP0000335452_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Medtr6g012470.1_MEDT ----------------------------------------------------------------------------------MVVVVVDDDGGGERMAEGGRKREGAQREDE--------
    Millet_GLEAN_1003072 ---------------------------------------------GAEDQYS-------------------------------VLINFDTQNSTDNFYKHFNGKQFSSLEGD-VCHVRFV
    Cre10.g454400.t1.3_C KTIPTSPSSPSSEITAAAPPDNTPTPPTPPAHTTQQSQSQPPHPHGQQHEHHGDHNPHGGHNHGGHSHQPHQARPPSQRVVCMVVMRMESPEAADELYNDLNGKPFSSLEPDIVCRLVHV
    AT2G26000.2_ARATH    ---------------------------------------------DIENRYS-------------------------------ILIRFDSQESTDTFFQHFRGKQFNSLDED-VCRLLFA
    MDP0000255931_MALDO  ---------------------------------------------GMEDRYS-------------------------------VLIECKNRDTAGEFYSTFNGRKYSPGEAE-LCHILFL

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                               1210      1220      1230      1240      1250      1260      1270      1280      1290      1300      1310      1320
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    Glyma13g22710.1_GLYM QSVE---YSE-YAEVAGT---------------------------------------PPPGCTEIPTCPVCL-------ERLD---PDTSGILTTLCDHSFDC-PCVSKW--TYLSCQ--
    MA_10428609g0020_PIC ------------------------------------------------------------------------------------------------------------------------
    supercontig_46.26_CA VSVE---YTD-SSELAST---------------------------------------PPVGFTDLPTCP---------------------------------------------------
    Glyma09g17743.1_GLYM HDIQ-----------------------------------------------------------------------------------EHTRTSTVVCVCVCVCTSYISKW--ADSSCP--
    orange1.1g015431m_CI VDVQFTGYTG-SLEHVQP---------------------------------------APASSTEQPSCPVCL-------ERLD---QDTSGILTTICNHSFHC-SCISKW--TDSSCP--
    MDP0000210436_MALDO  ----------------------------------------------------------------------------------------------TSCDHL-ASL----SSDLAHIPTP--
    MA_508435g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    Medtr2g104600.1_MEDT LDVQ---YTG-SIEHAQP---------------------------------------SNATSTEQPTCPVCL-------ERLD---QDTSGILTTICNHSFHC-SCISKW--ADSSCP--
    Potri.005G110500.1_P VDVQFTGYSG-SLEHTKP---------------------------------------SPTSTTEQPSCPVCL-------ERLD---QDMGGILTTICNHSFHC-SCISKW--TDSSCP--
    Millet_GLEAN_1001828 ------------------------------------------------------------------------------------------------------------------------
    C.cajan_29736_CAJCA  ----------------------------------------------------------------------------------------------TSCDHL-GAL----SDDLSHIPTP--
    MA_2413g0010_PICAB   ADVQ---FTG-SFEHAST---------------------------------------PPTGLTELPTCPVCL-------GEL--------------------------------------
    cassava4.1_006182m_M VDVQFTGYSG-SLE-TQP---------------------------------------SPTSTTEQPSCPVCL-------EKLD---QDMGGILTTICNHSFHC-SCISKW--EDSSCP--
    Ostta4_34845_OSTTA   ESVA---YDDGDGDAARE---------------------------------------AARTRTEVPTCPVCL-------DRLD---ADASGIATTICDHTFHA-ACLERW--ADASCP--
    Tc02_g010060_THECC   ----------------------------------------------------------------------------------------------TQCDHL-ASL----SSDLAHIPTP--
    chr4.CM0003.790.r2.a LSVE---YSE-FAEVAGT---------------------------------------PPVGCTEIPTCPVCL-------ERLD---PDTSGILKTLCDHSFQC-PCVSKW--TYLSCQ--
    MDP0000313787_MALDO  DSVD---YTE-SEEIAGT---------------------------------------PEKEFTELPTCPVCL-------ERLD---ADTGGIVSTLCDHSFQC-PCISKW--TYLSCQ--
    MA_28767g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    supercontig_10.127_C VDVQFTGYSG-SLDHAQP---------------------------------------SPASATEPPSCPVCL-------ERLH---QNIGGILTTICNHSFHC-SCISKW--TDSSCP--
    28152.m000902_RICCO  ----------------------------------------------------------------------------------------------TSCDHL-GSL----SSDLSHISTP--
    C.cajan_02948_CAJCA  LDVQ---YTG-SIEHAQP---------------------------------------SNATSTEQPTCPVCL-------ERLD---QDTSGILTTICNHSFHC-SCISKW--ADSSCP--
    GRMZM2G066169_P03_ZE AAVQ---YTP-SSEVATT---------------------------------------PPAGSTELPMCPVCI-------ERLD---QDISGILATTCDHSFRC-SCVSVW--TNSSCP--
    MA_85047g0010_PICAB  ----------------------------------------------------------------------------------------------TDCPHL-QVL----CSDLRHIPGL--
    Gorai.009G125800.1_G LDVQFTGYTG-SLDHVQS---------------------------------------PPASSTEQPSCPVCL-------ERLD---QDASGILTTICNHSFHC-SCISKW--TDSSCP--
    MDP0000304270_MALDO  VDVQ---YTG-SIEHAQA---------------------------------------SSGSSTEQPSCPVCL-------GHL--------------------------------------
    Phvul.002G052300.1_P ----------------------------------------------------------------------------------------------SSCDHL-PSL----SADLSHIPPP--
    selmo_89370_SELMO    ----------------------------------------------------------------------------------------------TSCPHL-DRV-----CNAPLLPRF--
    Sb04g005670.1_SORBI  EDVH---YTQ-LIEHAHT---------------------------------------SVTNLAEQPTCPVCL-------ERLD---QDPGGILTTICNHSFHC-SCISKW--TDSSCP--
    GSVIVT01015569001_VI LSAE---YTE-SADFACT---------------------------------------PPPGFTELPTCPVCL-------ERLD---QDTSGILNTLCDHSFQC-PCISKR--TNLSCQ--
    orange1.1g015426m_CI VDVQFTGYTG-SLEHVQP---------------------------------------APASSTEQPSCPVCL-------ERLD---QDTSGILTTICNHSFHC-SCISKW--TDSSCP--
    selmo_403400_SELMO   ADVE---YTS-AGGDASS---------------------------------------APSGLTELPSCAVCL-------ERLD---QHVSGILTTVCNHSFHT-SCISKW--TDSTCP--
    Ca_06690_CICAR       ISVE---YSE-CEEVAGT---------------------------------------PPAGFTEIPTCPVCL-------ERLD---PDTSGILTTLCDHSFQC-PCVSKW--TYLSCQ--
    Gorai.001G043700.1_G HSVE---YTE-LGEIAST---------------------------------------PPVGFTELPTCPICL-------ERLD---PDTSGILSTFCDHSFQC-SCTSKW--TYLSCT--
    GSVIVT01029385001_VI ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01013625001_VI VDVQ---YTG-SIEHAQA---------------------------------------SPASSTEQPTCPVCL-------ERLD---QDISGILTTICNHSFHC-SCISKW--TDSSCP--
    orange1.1g016340m_CI LSVE---YTE-LAEIAST---------------------------------------PPAGFTELPTCPICL-------ERLD---PDTSGILSTICDHSFQC-SCTAKW--TVLSCQ--
    Solyc03g120000.2.1_S ADVH---YTG-SIEHTQS---------------------------------------LPASSTEQPFCPVCL-------ERLD---QDTSGILTTICNHSFHC-SCISKW--TDSSCP--
    Medtr5g005150.1_MEDT ----------------------------------------------------------------------------------------------TSCHHL-HSL----SNDLTHIPTP--
    Potri.007G063900.1_P VDVQFTGYSG-SLEHSQP---------------------------------------STTSTAEQPSCPVCL-------ERLD---QDMGGILTTICNHSFHC-SCISKW--TDSSCP--
    Gorai.005G232800.1_G ----------------------------------------------------------------------------------------------THCDHL-PSL----SSDLTHIPIP--
    GRMZM2G005205_P02_ZE ----------------------------------------------------------------------------------------------TSCPHI-GTMPPAGADDLARVPSP--
    GRMZM2G041561_P01_ZE EEVH---YTE-LIEHAHT---------------------------------------SVTNLAEQPTCPVCL-------ERLD---QDPGGILTTICNHSFHC-SCISKW--TDSSCP--
    cassava4.1_008621m_M ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_033258m_M VDIQFTGYSG-SLD-TQP---------------------------------------SPASTTEQPSCPVCL-------AVLTFSMVNNCGICLD-CERQFNCPGCFSATGVCMSSFY--
    CMK309C_CYAME        ERVV---YRC-TSKQSSR------------LVASLALPSEQDGDEIVEYDESTSSDADIGHLEEWPTCPVCL-------DRLD-----LESILVGLCNHALHT-ACLARW--GDPSCP--
    MDP0000335450_MALDO  ----------------------------------------------------------------------------------------------TSCDHL-ASL----SSDLAHIPTP--
    Phvul.003G167400.1_P QSVE---YSE-YAEVAGT---------------------------------------PPPGCTEIPTCPVCL-------ERLD---PDTSGIITTLCDHSFQC-PCVSKW--TYLSCQ--
    AK251438.1_HORVU     VAVQ---YTS-STELDLI---------------------------------------PPVGSTELPTCPVCI-------ERLD---QDISGIGATNCDHSFQC-SCVSMW--VSSSCP--
    Phvul.005G181500.1_P LDVQ---YTG-SIEHAQP---------------------------------------SNASSTEQPTCPVCL-------ERLD---QDTGGILTTICNHSFHC-SCISKW--ADSSCP--
    orange1.1g011525m_CI LSVE---YTE-LAEIAST---------------------------------------PPAGFTELPTCPICL-------ERLD---PDTSGILSTICDHSFQC-SCTAKW--TVLSCQ--
    GSMUA_Achr3P13360_00 VDVQ---YTG-SIEHAQS---------------------------------------SLTSSAELPTCPVCL-------ERLD---QDTGGILTTICNHTFHC-SCISKW--TDSSCP--
    evm_27.model.AmTr_v1 SDVR---YTD-SIEIAET---------------------------------------PPKGLTELPTCPVCL-------ERLD---QDISGILTTMCNHSFHG-SCTAKW--TNSSCP--
    Pp1s40_296V6.1_PHYPA ADVQ---FTE-TAEQAST---------------------------------------PPSGLTELPTCPVCL-------ERLD---QQISGILTTVCNHSFHS-TCISKW--TDSSCP--
    Ca_02909_CICAR       LDVQ---YTG-SIEHAQP---------------------------------------SNATSTEQPTCPVCL-------ERLD---QDTSGILTTICNHSFHS-SCISKW--ADSSCP--
    Tc00_g032110_THECC   VDVQFTGYSG-SLDHVQS---------------------------------------PPASSTEQPSCPVCL-------ERLD---QDTSGILTTICNHSFHC-SCISKW--TDSSCP--
    Cc02_g19690_COFCA    ----------------------------------------------------------------------------------------------THCDHL-DTL----SSDLTHIPPP--
    MDP0000266286_MALDO  QSVD---YTE-SEEIAGI---------------------------------------PENEFTELPTCPVCL-------ERLD---ADTSGIASTLCDHSFQC-PCISKW--TYLSCQ--
    EG4P66601_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Solyc07g008050.2.1_S QSVA---YEE-SAYITST---------------------------------------PPVGYTELPTCPVCL-------ERLD---QDTSGIQSTLCDHSFQC-SCVSKW--TYLACQ--
    Cucsa.132280.1_CUCSA MSVE---YTE-SAEVAGS---------------------------------------PPDGCTELPTCPVCL-------ERFD---PDTSGIIHTLCDHSFHC-LCISKW--TSLSCQ--
    Pp1s14_283V6.1_PHYPA ----------------------------------------------------------------------------------------------IECPHL-HHL----NGVTQSLPQF--
    EG4P15130_ELAGV      SNFAWMLELG----------------------------------------FLRRVWVTAAEASSDESCSICL-------ERF----QEGSVIGIPHCGHRYHW-DCITKWYDSATTCP--
    orange1.1g018432m_CI LSVE---YTE-LAEIAST---------------------------------------PPAGFTELPTCPICL-------ERLD---PDTSGILSTICDHSFQC-SCTAKW--TVLSCQ--
    Ostta4_35565_OSTTA   FDVLGVVDAGGSA------------------------------------------------------------------LGMTSTCAHAVGVRSGECEH---------------------
    Os02g09060.1_ORYSA   EDVH---YTQ-LIEHAHS---------------------------------------SVTSSAEQPTCPVCL-------ERLD---QDPGGILTTICNHSFHY-SCMSKW--ADSSCP--
    PGSC0003DMP400053855 QSVV---YEE-SAYITST---------------------------------------PPVGYTELPTCPVCL-------ERLD---QDTSGIQSTLCDHSFQC-SCVSKW--TYLACQ--
    27446.m000481_RICCO  VDVQFTGYSG-SLD-TQP---------------------------------------SPASTTEQPSCPVCL-------ERLD---QDMGGILTTICNHSFHC-SCISKW--TDSSCP--
    Potri.009G090100.1_P ----------------------------------------------------------------------------------------------TSCDHL-ASL----SSDLAHIPTP--
    PDK_30s766901g002_PH VDVQ---YTG-SIEHAQN---------------------------------------SLASSAEQPACPVCL-------ERLD---QDTSGILTTICNHSFHS-SCISKW--TDSSCP--
    29927.m000605_RICCO  -SVE---YTE-VAEIAST---------------------------------------PPVGFTELPTCPICL-------ERLD---PDTSGILSTLCDHSFQC-SCTSKW--TYLSCQ--
    AT2G42160.1_ARATH    MSVE---HTE-FDEVAAE---------------------------------------APTGFTELPTCPICL-------ERLD---PDTSGIVSTLCDHSFQC-SCTSKW--TYLSCQ--
    evm_27.model.AmTr_v1 ----------------------------------------------------------------------------------------------TSCDHL-SVI----SSDLSHIPAM--
    MA_494524g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    MA_79946g0010_PICAB  ----------------------------------------------------------------------------------------------------------------RQFPF---
    Millet_GLEAN_1001547 ----------------------------------------------------------------------------------------------TSCPHL-GTMPPAGAIDLERVPPP--
    ITC1587_BchrUn_rando ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P30140_00 ----------------------------------------------------------------------------------------------TACDHL-PSL----CSDLSQIPLP--
    orange1.1g019425m_CI ------------------------------------------------------------------------------------------------------------------------
    Glyma15g00770.2_GLYM LDVQ---YTG-SIEHAQP---------------------------------------SNATSTELPTCPVCL-------ERLD---QDTGGILTTICNHSFHC-SCISKW--ADSSCP--
    orange1.1g014500m_CI LSVE---YTE-LAEIAST---------------------------------------PPAGFTELPTCPICL-------ERLD---PDTSGILSTICDHSFQC-SCTAKW--TVLSCQ--
    Sb06g030620.1_SORBI  -------------------------------------------------------------------------------NILN-------------------------------------
    PDK_30s709101g009_PH ASVE---LTE-STEIAAT---------------------------------------PPAGTTELPTCPVCI-------ERLD---QDISGIVATTCDHSFQC-SCISKW--VNSSCS--
    GRMZM5G896756_P02_ZE ----------------------------------------------------------------------------------------------TSCPHLGTMPPAGAELLMTLLACL--
    Os12g32374.1_ORYSA   ----------------------------------------------------------------------------------------------TSCPHL-PAMPAASADDLARVPPP--
    cassava4.1_018065m_M ----------------------------------------------------------------------------------------------TSCDHL-GSL----SSDLSHIPTP--
    Bradi3g06180.1_BRADI EDVH---YTQ-LIEHAHS---------------------------------------SVTSSAEQPTCPVCL-------ERLD---QDPGGILTTICNHSFHC-SCISKW--TDSSCP--
    PGSC0003DMP400009626 ----------------------------------------------------------------------------------------------THCDHL-ASL----SSDLTHIPTP--
    Solyc10g049650.1.1_S ----------------------------------------------------------------------------------------------SHCDHL-ASL----SSDLTHIPTP--
    Glyma07g14551.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g014488m_CI LSVE---YTE-LAEIAST---------------------------------------PPAGFTELPTCPICL-------ERLD---PDTSGILSTICDHSFQC-SCTAKW--TVLSCQ--
    Bradi4g06630.1_BRADI ----------------------------------------------------------------------------------------------TSCPHL-SAMPAAGADELARVPSP--
    C.cajan_01900_CAJCA  QSVE---YSE-YAEVAGT---------------------------------------PPPDCTEIPTCPVCL-------ERLD---PDTSGIQATLCDHSFQC-PCVSKW--TYLSCQ--
    GSVIVT01037858001_VI ----------------------------------------------------------------------------------------------TSCDHL-ASL----SSDLVHIPTP--
    PGSC0003DMP400009872 ADVH---YTG-SIERTQS---------------------------------------SPASSTEQPFCPVCL-------ERLD---QDTSGILTTICNHSFHC-SCISKW--TDSSCP--
    C.cajan_21844_CAJCA  ------------------------------------------------------------------------------------------------------------------MPFL--
    ITC1587_Bchr3_P06352 VDVQ---YTG-SIEHAQS---------------------------------------SLTSSAELPTCPVCL-------ERLD---QDTGGILTTICNHTFHC-SCISKW--TDSSCPIY
    Glyma01g45400.1_GLYM ----------------------------------------------------------------------------------------------SWCDHLASSL----SEDLGQIPGP--
    Bradi5g23970.1_BRADI VAVQ---YTS-SAEIAVI---------------------------------------PPVGSTELPTCPVCI-------ERLD---QDISGIVATNCDHSFQC-SCVSMW--VSSSCP--
    chr1.CM0088.530.r2.d ----------------------------------------------------------------------------------------------TCCDHL-ASL----SLDLTHIPIP--
    Sb08g016307.1_SORBI  ----------------------------------------------------------------------------------------------TTCPHL-GTMPPAGPDDLARVPPP--
    Os04g55480.1_ORYSA   VAVQ---YTP-STKPAVT---------------------------------------PPVGSTELPTCPVCI-------ERLD---QDISGIMATTCDHSFQC-SCVSMW--VNSSCP--
    EG4P66602_ELAGV      ASVE---FTE-STEIAAT---------------------------------------PPSGSTELPTCPVCI------------------------------------------------
    Millet_GLEAN_1002888 ------------------------------------------------------------------------------------------------------------------------
    supercontig_106.73_C ----------------------------------------------------------------------------------------------TWCDHL-SSL----SSDLVHIPIP--
    cassava4.1_006523m_M LNVD---YTE-AAEIAST---------------------------------------PPSGFTQLPTCPICL-------ERLD---PDTSGILSTLCDHSFQC-SCTSKW--TYLSCQ--
    Medtr4g114970.1_MEDT LSVE---YSE-CEEVAGT---------------------------------------PPAGCTEIPTCPVCL-------ERLD---PDTSGICTTLCDHSFQC-PCVSKW--TYLSCQ--
    orange1.1g023654m_CI ----------------------------------------------------------------------------------------------TSCDHLVASL----STDLARIPNP--
    orange1.1g032009m_CI ----------------------------------------------------------------------------------------------TSCDHLVASL----SSDLAHIPTP--
    GSMUA_AchrUn_randomP DSVE---FTE-STKIAGT---------------------------------------PPVGSSELPTCPVCI-------ERLD---QDISGIIATTCDHSFQC-SCISKW--VNSSCS--
    Cc06_g08180_COFCA    QSVE---YTE-VAEIAST---------------------------------------PPPGFTELPTCPICL-------ERLD---QDTSGIQSTLCDHSFYC-SCVSKW--TYLSCQ--
    MDP0000279102_MALDO  QSVD---YTE-SEEIAGI---------------------------------------PENEFTELPTCPVCL-------ERLD---ADTSGIASTLCDHSFQC-PCISKW--TYLSCQ--
    selmo_227454_SELMO   RDVY---FTN-SLQDACE---------------------------------------APPGLTEIPTCTFCL-------QRLD---EHISGVPARKVD-SFDP---------RNSSCL--
    Cucsa.105760.1_CUCSA VDVQ---YTA-SIEHAQA---------------------------------------SPASSTEQPTCPVCL-------DRLD---QETSGILTTICNHSFHC-SCISKW--SDSSCP--
    MLOC_18786.1_HORVU   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.800.r2.a ------------------------------------------------------------------------------------------------------------------------
    MDP0000191872_MALDO  VDVQ---YTG-SIEHAQA---------------------------------------SSGSSTEQPSCPVCL-------ERLD---QDMEGILTTICNHSFHC-SCISKW--TDSSCP--
    evm_27.model.AmTr_v1 LDVQ---YTG-SIEHAVA---------------------------------------SPTGFTELPTCPVCL-------ERLD---QDISGILTTICNHTFHC-SCISNW--TDSSCP--
    ITC1587_BchrUn_rando DSVE---FTE-STKIAGT---------------------------------------PPVGSSELPTCPVCIALNHFFGALIW---QNIMDIYKAT-DYVAMV-WYVPPY--TVPQLD--
    LjSGA_019478.1_LOTJA IGLC--EYTG-----------------------------------------------LNTCSTIQCLNTAYM-------SRLD---QDTSGILTTICNHSFHC-SCISKW--ADSSCP--
    Ostta4_38022_OSTTA   FDVLGVVDAGGIA------------------------------------------------------------------LGMTSTCAHAVGVRSGECEH---------------------
    Cc11_g03280_COFCA    VDVQ---FTG-SIEHAQA---------------------------------------SAVSNMEQPSCPVCL-------ERLD---QDMGGILTTICNHSFHC-SCISKW--TDSSCP--
    AT2G14830.2_ARATH    ----------------------------------------------------------------------------------------------KTCDHL-NTL----SPDLLHLPTP--
    Glyma17g12120.1_GLYM QSVE---YSK-YAEVAGT---------------------------------------PPPGCTEIPTCPVCL-------ERLD---PDTSGILTTLCDHSFDC-PCVSKW--TYLSCQ--
    Potri.018G128100.1_P LSVE---FTE-SAEIAST---------------------------------------PPENFTELPACPICL-------ERLD---PDTSGIRNTLCDHSFQC-SCTSKW--THLSCQ--
    MDP0000335452_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Medtr6g012470.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1003072 EDVH---YTQ-LIEHAHS---------------------------------------SVTSLAEQPTCPVCL-------ERLD---QDPGGILTTICNHSFHC-SCISKW--TDSSCP--
    Cre10.g454400.t1.3_C RAVE---VTS-GGAAAAAALAAKPPGLPEQPAAAAPAAAAGDAVAAPAAPTAVAAHVPPPGQTELPTCPVCL-------ERLD---EHVSGIVTTVCTHMFHS-ECLQKW--ADSTCP--
    AT2G26000.2_ARATH    LDVQFTGYSG-SIDHTQP---------------------------------------SAAGPIEQPTCPVCL-------ERLD---QDTGGILTTMCNHSFHC-SCISNW--PDSSCP--
    MDP0000255931_MALDO  QSVD---YTE-SEEIAGI---------------------------------------PENEFTELPTCPVCL-------ERLD---ADTSGIASTLCDHSFQC-PCISKW--TYLSCQ--

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                               1330      1340      1350      1360      1370      1380      1390      1400      1410      1420      1430      1440
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    Glyma13g22710.1_GLYM -----------------------------------------------VCQFC-QQ--QDE---KPTCFICGTLDDLWVCMICGFVGCGRYKEGHAIQHW-K--DTQ--HCYSLDFKTQQI
    MA_10428609g0020_PIC --------------------------------------------------------------------------------------------------------------MATCLSTKKT
    supercontig_46.26_CA -----------------------------------------------VCRLC-QQ--HDE---KPTCSVCGTLENLWVCVICGFVGCGRYKEGHAIRHW-K--DTQ--HCYSLDLRTQQI
    Glyma09g17743.1_GLYM ------------------------------------------------------Q--QAQ---KSLCFVCQTIDNLWICVICGYVGCGRYKGGHAIIHW-K--ETQ--HCYSLEVETKRA
    orange1.1g015431m_CI -----------------------------------------------VCRYC-QQ--QPE---KSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHW-K--ETE--HCYSLELETQRV
    MDP0000210436_MALDO  ---------------------------------------------------------------DTACNRCQHPNENWLCLCCKDVLCSRFVNKHMLQHY-Q--QSN--HCLALSYSDLSV
    MA_508435g0010_PICAB -----------------------------------------------VCRYC-QQ--QPE---KSTCSVCSTSENLWICVICGFVGCGRYKSGHAIKHW-K--ETQ--HCYSLELETQRV
    Medtr2g104600.1_MEDT -----------------------------------------------VCRYC-QQ--QAE---NSICFVCQTTENLWICVICGFVGCGRYKGGHAIIHW-K--ETQ--HCYSLEVETKRV
    Potri.005G110500.1_P -----------------------------------------------VCRYC-QQ--QPE---KSICFVCQTSENLWICVLCGFVGCGRYKGGHAIRHW-K--ETQ--HCYSLELDTQRV
    Millet_GLEAN_1001828 -----------------------------------------------VCQFC-QK--QPE---NSTCSVCPTSGNLWICVICGFVGCGRYQEGHAKQHW-K--DTQ--HCYSLDLETQRV
    C.cajan_29736_CAJCA  ---------------------------------------------------------------GTHCNTCQHPTENWLCLSCKQVLCSRFVNKHMLHHF-H--LTNANHSVALSFSDLSV
    MA_2413g0010_PICAB   -------------------------------------------------------------------------------------------------HY---------------------
    cassava4.1_006182m_M -----------------------------------------------VCRYC-QQ--QPE---KSICFVCQTSENLWLCVICGFVGCGRYKAGHATRHW-K--ETQ--HCYSLELETQRV
    Ostta4_34845_OSTTA   -----------------------------------------------VCRHVAGE--AEE---RATCATCGTDGDLWVCLICGEVGCGRYAGACAVNHW-K--ETN--HTYSLELGTQRV
    Tc02_g010060_THECC   ---------------------------------------------------------------NTPCNRCQHPSENWLCLCCKDVLCSRFVNKHMLEHY-K--QTT--HCIALSYSDLSV
    chr4.CM0003.790.r2.a -----------------------------------------------VCQFC-QQ--QDE---KQTCFVCGTLDDVWVCMICGFVGCGRYKEGHAIQHW-K--DTQ--HCYSLDFKTQQI
    MDP0000313787_MALDO  -----------------------------------------------VCRLC-QQ--QDE---KLACSVCGISVNPWICIICGFVGCGRYTEGHAVKHW-K--DTQ--HCYSLELDRQQI
    MA_28767g0010_PICAB  ---------------------------------------------------------------RNVCEPPGALESLP-------------------------------GAFRFPLS----
    supercontig_10.127_C -----------------------------------------------VCRYC-QQ--QPE---KSTCFVCQTSENLWICVICGFVGCGRYKEGHATRHW-K--ETQ--HCYSLELETQRV
    28152.m000902_RICCO  ---------------------------------------------------------------DTPCHRCQHPSENWLCLSCKDVLCSRFVNKHMLQHY-H--QTH--HCVALSYSDLSV
    C.cajan_02948_CAJCA  -----------------------------------------------VCRYC-QQ--QAE---KSICFVCQTTDNLWICVICGHVGCGRYKGGHAIIHW-K--ETQ--HCYSLEVETKRV
    GRMZM2G066169_P03_ZE -----------------------------------------------VCQFC-QK--QSE---NSTCSVCQTTGNLWICVICGFVGCGRYQEGHAKQHW-K--DTQ--HCYSLDLETQRV
    MA_85047g0010_PICAB  ---------------------------------------------------------------DTPCKRCDHPAENWICLSS---------------------------------TDLSV
    Gorai.009G125800.1_G -----------------------------------------------VCRYC-QQ--QPE---KSKCFICQTSENLWICVICGFVGCGRYKGGHAIIHW-K--ETQ--HCYSLELETQRV
    MDP0000304270_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Phvul.002G052300.1_P ---------------------------------------------------------------NTPCHTCHHPSENWLCLSCKQVLCSRFVNKHMLHHF-T--HTN--HFLALSFSDLSV
    selmo_89370_SELMO    ---------------------------------------------------------------DAPCAICGDHRENWVCLSCRKVLCGRFINGHMLSHF-Q--EFG--HPSALSYRDLSV
    Sb04g005670.1_SORBI  -----------------------------------------------VCRYC-QQ--QPE---KSMCSICGTLENLWICLICGHVGCGRYKGGHAIEHW-K--ETQ--HCYSLELETQKV
    GSVIVT01015569001_VI -----------------------------------------------VCQFC-QQ--QDE---KPTCFVCGTSENLWVCMICGFAGCGRYKEGHAIRHW-K--DAQ--HSYSLDLEKQQV
    orange1.1g015426m_CI -----------------------------------------------VCRYC-QQ--QPE---KSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHW-K--ETE--HCYSLELETQRV
    selmo_403400_SELMO   -----------------------------------------------VCRYC-QE--KYE---NSTCSVCSTADNLWICVICGFVGCGRYEEGHAINHW-R--ETQ--HCYSLELETQRV
    Ca_06690_CICAR       -----------------------------------------------VCRFC-QQ--QDE---KPTCFICGTLDDVWVCMICGFVGCGRYKEGHAIRHW-K--DTQ--HCYSLDFRTQQI
    Gorai.001G043700.1_G -----------------------------------------------VCRFC-QQ--QEE---NPVCSICGSGENLWICLICGFMGCGRYKEGHGVRHW-K--DTQ--HCYSLELISQQI
    GSVIVT01029385001_VI ----------------------------------------------------------------------------------------------MLEHY-K--KAN--NYLALNLNDLSV
    GSVIVT01013625001_VI -----------------------------------------------VCRYC-QQ--QPE---KSVCIVCQTSENLWICVLCGFVGCGRYKEGHAIRHW-K--ETQ--HCYSLELETQRV
    orange1.1g016340m_CI -----------------------------------------------VCRFC-HQ--QDE---RPTCSVCGTVENLWVCLICGFVGCGRYKEGHAVRHW-K--DTQ--HWYSLDLRTQQI
    Solyc03g120000.2.1_S -----------------------------------------------VCRYC-QQ--QPG---NSTCSICQSPENLWMCVICGFVGCGRYKEAHATRHW-K--ETQ--HCYALELETRRV
    Medtr5g005150.1_MEDT ---------------------------------------------------------------DTPCNRCQHPSENWLCLSCKDVLCGRFVNRHMLQHF-R--ETN--HSVALSFSDLSV
    Potri.007G063900.1_P -----------------------------------------------VCRYC-QQ--QPE---KSICIVCQTSENLWICVLCGFVGCGRYKGGHAIQHW-K--ETQ--HCYSLELDTQRV
    Gorai.005G232800.1_G ---------------------------------------------------------------STPCSRCQHPSENWLCLSCKVVLCSRFVNKHMLEHY-Q--QTT--HSIALSFSDLSV
    GRMZM2G005205_P02_ZE ---------------------------------------------------------------DSPCSRCNHPAENWLCFICKDVLCSRFINKHMLCHH-Q--ETG--HCLALSFSDLSV
    GRMZM2G041561_P01_ZE -----------------------------------------------VCRYC-QQ--QPE---KSMCSICGTSENLWICLICGHVGCGRYKGGHAIEHW-K--ETQ--HCYSLELETQKV
    cassava4.1_008621m_M -----------------------------------------------VCRLC-QQ--QDE---IPSCSVCGTSENLWVCLICGFVGCGRYKEQHAIRHW-Q--DTQ--HCYSLDLRTQQI
    cassava4.1_033258m_M -----------------------------------------------VCRYC-QQ--QPE---KSICFVCQTSENLWLCVICGFVGYGR-------------------------------
    CMK309C_CYAME        -----------------------------------------------VCRFV-SETLNPQ---KTSCQVCNAQTQLWICLVCGHVGCGRYVQHHALAHF-R--DTN--HVFAMELQSGRV
    MDP0000335450_MALDO  ---------------------------------------------------------------DTACNRCQHPNENWLCLCCKDVLCSRFVNKHMLQHY-Q--QSN--HCLALSYSDLSV
    Phvul.003G167400.1_P -----------------------------------------------VCQFC-QQ--QDE---KPTCFICGTIDDLWVCMICGFVGCGRYKEGHAIQHW-K--DTQ--HCYSLDFKTQQI
    AK251438.1_HORVU     -----------------------------------------------VCQFC-QK--LSEAPTNPTCSVCQTSENLWICVICGFVGCGRYKEGHSIRHW-K--GTQ--HCYSLDLETQRV
    Phvul.005G181500.1_P -----------------------------------------------VCRYC-QQ--QAE---KSICFVCQTTENLWICVICGYVGCGRYKGGHAIIHW-K--ETQ--HCYSLEVETKRV
    orange1.1g011525m_CI -----------------------------------------------VCRFC-HQ--QDE---RPTCSVCGTVENLWVCLICGFVGCGRYKEGHAVRHW-K--DTQ--HWYSLDLRTQQI
    GSMUA_Achr3P13360_00 -----------------------------------------------VCRYC-QQ--QPE---KSTCSVCGTSENVWICLICGFVGCGSYKEGHAINHW-K--ETQ--HCYSLELETQRV
    evm_27.model.AmTr_v1 -----------------------------------------------VCRFC-QQ--QPE---KSSCSICETLENLWICIICGFVGCGRYKEGHAIRHW-K--ETQ--HCYSLDLENQRV
    Pp1s40_296V6.1_PHYPA -----------------------------------------------VCRYC-QQ--QAE---NSTCFVCGTTEHLWICVICGFIGCGRYKEGHAVNHW-K--ESQ--HCYSLDLETQRV
    Ca_02909_CICAR       -----------------------------------------------VCRYC-QQ--QAE---KSICFVCQTTENLWICVICGFVGCGRYKGGHAIIHW-K--ETQ--HCYSLEVETKRV
    Tc00_g032110_THECC   -----------------------------------------------VCRYC-QQ--QPE---TSTCFICQTSENLWICVLCGFVGCGRYKRGHAIIHW-K--ETQ--HCYSLELETQRV
    Cc02_g19690_COFCA    ---------------------------------------------------------------DTPCYRCEHPQENWLCLSCEDVLCSRFVNKHMLEHYRQ--QNN--HCLALSYSDLSV
    MDP0000266286_MALDO  -----------------------------------------------LCRLC-QQ--QDE---KPACSVCGISVNPWICIICGFVGCGRYTEGHAVKHW-K--DTQ--HCYSLELDRQQI
    EG4P66601_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Solyc07g008050.2.1_S -----------------------------------------------VCRLC-QQ--QDE---KPACSECGTMKNLCVCLICGFVGCGRYEKKHAIKHW-M--DAA--HHYSLELETQQI
    Cucsa.132280.1_CUCSA -----------------------------------------------VCRFC-QQ--QDE---KQACFICGTVENLWVCVICGFLGCGRYKEGHAIRHW-K--NMH--HCYSLDLRTQQI
    Pp1s14_283V6.1_PHYPA ---------------------------------------------------------------DALCSVCKNPNENWLCLCCHEVFCSRFINGHMLAHF-K--DAN--HPLAAGFRDLSV
    EG4P15130_ELAGV      -------------------------------------------------------------------------------------LCRRYVLDNADVES-SSDSSE--------------
    orange1.1g018432m_CI -----------------------------------------------VCRFC-HQ--QDE---RPTCSVCGTVENLWVCLICGFVGCGRYKEGHAVRHW-K--DTQ--HWYSLDLRTQQI
    Ostta4_35565_OSTTA   ---------------------------------------------------------------SRACETCGTTSELWACGACGKSFCGRYQNACAKKHA-S--ESA--HDVCVSWDDMSC
    Os02g09060.1_ORYSA   -----------------------------------------------VCRYC-QQ--EPE---KSSCSVCGTSENLWICVICGHVGCGRYKGGHAIEHW-K--ETQ--HCYSLELETQKV
    PGSC0003DMP400053855 -----------------------------------------------VCRLC-QQ--QDE---KPACSECGTMKNLCVCLICGFVGCGRYEKKHAIKHW-T--DAA--HHYSLELETQQI
    27446.m000481_RICCO  -----------------------------------------------VCRYC-QQ--QPE---KSTCFVCQTSENLWLCVICGFVGCGRYKEEHAIRHW-K--ETQ--HCYSLELETQRV
    Potri.009G090100.1_P ---------------------------------------------------------------DTPCNRCQHPSENWLCLSCKDVLCSRFVNKHMLQHF-H--QTS--HCLALSYSDLSI
    PDK_30s766901g002_PH -----------------------------------------------VCRYC-QQ--QPE---KSTCSVCGTSENLWMCVLCGFIGCGRYKDGHAVRHW-K--ETQ--HCYSLELETQRV
    29927.m000605_RICCO  -----------------------------------------------VCRLC-QQ--QDE---KPACAVCGTVENLWVCLICGFIGCGRYKEGHAMRHW-Q--DTQ--HCYILDLRTQQI
    AT2G42160.1_ARATH    -----------------------------------------------VCRLC-QQ--QDE---ILNCSICGKTENVWACLVCGFVGCGRYKEGHSIRHW-K--ETH--HCYSLDLRTQQI
    evm_27.model.AmTr_v1 ---------------------------------------------------------------DTPCSR-------------------------FLLHFLNTPLFS--------------
    MA_494524g0010_PICAB ----------------------------------------------------------------------------------------------MLDHY-E--NTG--HFLATIYSDLSV
    MA_79946g0010_PICAB  --------------------------------------------------------------------RCDHPVENWICLSCREVLCSHFINGHMLEHY-E--NTG--NCLAINYK----
    Millet_GLEAN_1001547 ---------------------------------------------------------------DSPCSRCHHPAENWLCLICKDVLCSRFINKHMLCHY-Q--ETG--HCLALSFSDLSV
    ITC1587_BchrUn_rando -----------------------------------------------VCQFC-QK--HSE---KPTCSICGTPQNLWICVICGFVGCGRYKEGHAIRHW-K--DAQ--HCYSLDLETQRV
    GSMUA_Achr3P30140_00 ---------------------------------------------------------------DSPCSRCHHPAENWLCLSCKDVFCSRFINKHMLKHY-E--ESG--HCLALSFSDLSV
    orange1.1g019425m_CI ----------------------------------------------------------------------------------------RYKEGHAVRHW-K--DTQ--HWYSLDLRTQQI
    Glyma15g00770.2_GLYM -----------------------------------------------VCRYC-QQ--QAE---KSICFVCQTTENLWICVICGYVGCGRYKGGHAIIHW-K--ETQ--HCYSLEVETKRV
    orange1.1g014500m_CI -----------------------------------------------VCRFC-HQ--QDE---RPTCSVCGTVENLWVCLICGFVGCGRYKEGHAVRHW-K--DTQ--HWYSLDLRTQQI
    Sb06g030620.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    PDK_30s709101g009_PH ------------------------------------------------------E--HSE---KPTCSICGTSENLWICVICGFVGCGRYKEGHAVRHW-K--DTQ--HCYSLDLETQRV
    GRMZM5G896756_P02_ZE ---------------------------------------------------------------RPTLRAPGSGHLLPARILCRFFGIPR-----------SSIFRNNTEMISLTCRRTKF
    Os12g32374.1_ORYSA   ---------------------------------------------------------------DSPCSRCHHPAENWLCLICKDVLCSRFINKHMLYHY-Q--DTG--HCLALSFSDLSI
    cassava4.1_018065m_M ---------------------------------------------------------------NTPCNRCHHPSENWLCLSCKDVLCSRFVNKHMLQHY-H--HTN--HCVALSYSDLSV
    Bradi3g06180.1_BRADI -----------------------------------------------VCRYC-QQ--QPE---KSMCSICGTSENLWICVICGNVGCGRYKGGHAIEHW-K--ETE--HCYSLELETQKV
    PGSC0003DMP400009626 ---------------------------------------------------------------DTPCNRCQHPAENWLCLCCKEVLCSRFVNKHMLEHY-K--LTD--HSLALSFSDLSV
    Solyc10g049650.1.1_S ---------------------------------------------------------------DTPCNRCQHPAENWLCLCCKEVLCSRFVNKHMLEHH-K--LTD--HSLALSFSDLSV
    Glyma07g14551.1_GLYM ------------------------------------------------------------------------------------------------------------------MEIKRV
    orange1.1g014488m_CI -----------------------------------------------VCRFC-HQ--QDE---RPTCSVCGTVENLWVCLICGFVGCGRYKEGHAVRHW-K--DTQ--HWYSLDLRTQQI
    Bradi4g06630.1_BRADI ---------------------------------------------------------------DSQCSRCHHPSENWLCLICKDVLCSRFINKHMLCHY-Q--EMG--HCIALSFSDLSV
    C.cajan_01900_CAJCA  -----------------------------------------------VCRFC-QQ--QDE---KPNCFICGTLDDLWVCMICGFVGCGRYKEGHAIRHW-K--DTQ--HCYSLDFKTQQI
    GSVIVT01037858001_VI ---------------------------------------------------------------ETPCNRCHNPSENWLCLCCKEVLCSRFVNKHMLEHY-Q--KVN--HCLALSYSDLSI
    PGSC0003DMP400009872 -----------------------------------------------VCRYC-QQ--QPG---NSTCSICQSPENLWMCVICGFVGCGRYKEAHATRHW-K--ETQ--HCYALELETRRV
    C.cajan_21844_CAJCA  --------------------------------------------------------------------------------------------YHLLALY-F--ILI--SPLTSSNSDLSV
    ITC1587_Bchr3_P06352 RIEDPDPLPMESHLFFVVEPDDNSSSFLADCLSPRENEEEIVLLKGEVCRYC-QQ--QPE---KSTCSVCGTSENVWICVICGFVGCGSYKEGHAINHW-K--ETQ--HCYSLELETQRV
    Glyma01g45400.1_GLYM ---------------------------------------------------------------DTPCQTCQHPTENWLCLSCKQVLCSRFVNKHMLHHS-R--DTNLTHCVALSFSDLSV
    Bradi5g23970.1_BRADI -----------------------------------------------VCQFC-QK--LSETPTDPTCSVCQTSENLWICVICGFVGCGRYKEGHAIRHW-K--GTQ--HCYSLDLETQRV
    chr1.CM0088.530.r2.d ---------------------------------------------------------------NTPCNRCQHPTENWLCLSCKDVLCSRFVNKHMLHHF-Q--DTN--HSVALSFSDLSV
    Sb08g016307.1_SORBI  ---------------------------------------------------------------DSPCSRCHHPAENWLCLICKDVLCSRFINKHMLCHH-Q--ETG--HCLALSFSDLSV
    Os04g55480.1_ORYSA   -----------------------------------------------VCQFC-QK--QSK---NPTCSVCQTSGNLWICIICGFVGCGRYEEGHAIRHW-K--ETQ--HCYSLDLETQRV
    EG4P66602_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1002888 ------------------------------------------------------------------------------------------------------------------------
    supercontig_106.73_C ---------------------------------------------------------------DTPCNRCQNPRENWLCLSCKDVLCSRFMNQHMLQHY-Q--QTT--HCVALSFSDLSV
    cassava4.1_006523m_M -----------------------------------------------VCRLC-QQ--QDE---IPSCSVCGTSENLWVCLICGFVGCGRYKEQHAIRHW-Q--DTQ--HCYSLDLRTQQI
    Medtr4g114970.1_MEDT -----------------------------------------------VCRLC-QQ--QDE---KPTCFICGTLDDVWVCMICGFVGCGRYKEGHAIRHW-K--DTQ--HCYSLDFRTQQI
    orange1.1g023654m_CI ---------------------------------------------------------------DTPCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHY-Q--ETN--HSVALGYSDLSV
    orange1.1g032009m_CI ---------------------------------------------------------------DTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHY-L--ETN--HSVALSYSDLSV
    GSMUA_AchrUn_randomP -----------------------------------------------VCQFC-QK--HSE---KPTCSICGTPQNLWICVICGFVGCGRYKEGHAIRHW-K--DTQ--HCYSLDLETQRV
    Cc06_g08180_COFCA    -----------------------------------------------VCRLC-QQ--QDE---KPTCAVCETLENLWVCLICGFVGCARYEKGHAVRHS-R--DTE--HNYSLKLETQQI
    MDP0000279102_MALDO  -----------------------------------------------XCRLC-QQ--QDE---KPACSVCGISVNPWICIICGFVGCGR----------------------------QQI
    selmo_227454_SELMO   -----------------------------------------------VCWY--SL--QSE---NTTCSVCPTSENLWVCVICGFVGCGRYKEGHAIRHW-K--ETR--HCCSLELESQRV
    Cucsa.105760.1_CUCSA -----------------------------------------------VCRYC-QQ--QPE---KSVCFICQTSENLWICVICGFVGCGRYKEGHAIVHW-K--DTQ--HCYSLELETQRV
    MLOC_18786.1_HORVU   ---------------------------------------------------------------IFPC-RCHHPSENWLCLICKDVLCSRFINKHMLYHY-Q--ESD--HCIALSFR----
    chr4.CM0003.800.r2.a ------------------------------------------------------------------------------------------------------------------------
    MDP0000191872_MALDO  -----------------------------------------------VCRYC-QQ--QPE---KSNCFLCQTSENLWMCVICGFVGCGRYKEGHAIRHW-K--ETE--HCYSLELETQRV
    evm_27.model.AmTr_v1 -----------------------------------------------VCRYC-QL--QPE---KSTCSVCETSENLWICVICGFVGCGRYKEGHAIRHW-R--ETQ--HCYSLELETQRV
    ITC1587_BchrUn_rando -----------------------------------------------TCLY------------KFLVIETGTSYSIWRMPNASYLKCVPVNSSNSYR-----------------------
    LjSGA_019478.1_LOTJA -----------------------------------------------VCRYC-QQ--QAE---KSICFVCQTTENLWICVICGFVGCGRYKGGHAIIHW-K--ETQ--HCYSLEVETKRV
    Ostta4_38022_OSTTA   ---------------------------------------------------------------SRACETCGTTSELWACGACGKSFCGRYQNACAKKHA-S--ESA--HDVCVSWDDMSC
    Cc11_g03280_COFCA    -----------------------------------------------VCRFC-QQ--QPE---KSSCFVCQTSENLWMCVICGYIGCGRYREGHAIRHW-K--ETE--HCYSLELETRRV
    AT2G14830.2_ARATH    ---------------------------------------------------------------DTPCSRCQNPVENWLCLCCKEVLCSRFVNRHMLMHH-Q--QTG--HCLALSYSDLSV
    Glyma17g12120.1_GLYM -----------------------------------------------VCRFC-QQ--QDE---KPTCFICGTLDDLWVCMICGFVGCGRYKEGHAIQHW-K--DTQ--HCYSLDFKTQQI
    Potri.018G128100.1_P -----------------------------------------------VCRLC-QQ--QDE---KPACSVCGTSENLWVCLICGFVGCGRYKEGHAKRHW-Q--DTQ--HCYSLDLRTQQI
    MDP0000335452_MALDO  --------------------------------------------------------------------RCQHPNENWLCLCCKDVLCSRFVNKHMLQHY-Q--QSN--HCLALSYSDLSV
    Medtr6g012470.1_MEDT --------------------------------------------------------------------------------VEGVVGGRWYKSKSGMIKTKKGESNFLSHLKQLGHVTLSS
    Millet_GLEAN_1003072 -----------------------------------------------VCRFC-QQ--QPE---KSMCSICGTLENLWICVICGHVGCGRYKGGHAIEHW-K--ETQ--HCYSLELETQKV
    Cre10.g454400.t1.3_C -----------------------------------------------VCRYCVQG--AAS---TSRCGVCATCVDLWICLICGHVGCGRYRAGHAADHW-R--TSG--HCYALELDSQRV
    AT2G26000.2_ARATH    -----------------------------------------------VCRYC-QQ--QPE---NSVCCVCQTTENLWMCVICGVVGCGRYKEGHARRHW-E--ETE--HCYSLELETQRV
    MDP0000255931_MALDO  -----------------------------------------------LCRLC-QQ--QDE---KPACSVCGISVNPWICIICGFVGCGR----------------------------QQI

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                               1450      1460      1470      1480      1490      1500      1510      1520      1530      1540      1550      1560
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    Glyma13g22710.1_GLYM W---------DYVGDSYVHRLNQDQSKIDGKLEE-MNFRCMSLE-----------------------------------------------------------------------GDCGM
    MA_10428609g0020_PIC L---------GISWLSTTNSQV--------------------------------------------------------------------------------------------------
    supercontig_46.26_CA W---------DYVGDNYVHRLN--QSKADDKSVE-MNSHCMSLE-----------------------------------------------------------------------GDCGT
    Glyma09g17743.1_GLYM W---------DYVGDNYVHRLI--QSKTDGKLVE-LNTQCAHAD-----------------------------------------------------------------------NGCGS
    orange1.1g015431m_CI W---------DYAGDNYVHRLI--QSKTDGKLVE-LNSHCLHGK-----------------------------------------------------------------------DNCGS
    MDP0000210436_MALDO  W---------CFSCDAYLDAQL--------------------------------------------------------------------------------------------------
    MA_508435g0010_PICAB W---------DYVGDNYVHRLI--QSKTDGKLVE-LNAHCRDIG-----------------------------------------------------------------------DDCGR
    Medtr2g104600.1_MEDT W---------DYVGDNYVHRLI--QSKTDGKLVE-LNSHCVHAD-----------------------------------------------------------------------SG---
    Potri.005G110500.1_P W---------DYVGDNYVHRLI--QSKTDGKLVE-LNSHCVHAY-----------------------------------------------------------------------DGCGG
    Millet_GLEAN_1001828 W---------DYVGDSFVHRLN--HSKSDAKNAK-FKSKCKYSG-----------------------------------------------------------------------DDCVN
    C.cajan_29736_CAJCA  W---------CFSCDAYLDAQL--------------------------------------------------------------------------------------------------
    MA_2413g0010_PICAB   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006182m_M W---------DYVGDNYVHRLI--QSKTDGKLVE-LNSHCVHAN-----------------------------------------------------------------------DGCGS
    Ostta4_34845_OSTTA   W---------DYVSDGFVHRLI--QSKS--GLVE-LTPPERRRA--------------------------------------------------------------STSRGGGGYDETSS
    Tc02_g010060_THECC   W---------CFACDTYLDAQV--------------------------------------------------------------------------------------------------
    chr4.CM0003.790.r2.a W---------DYVGDNYVHRLNQNQSKIDGKLEE-MNSRCVSLE-----------------------------------------------------------------------GDCDS
    MDP0000313787_MALDO  W---------DYVGDAYVHRLN--QSKVDGKIINDTXSLCMSLE-----------------------------------------------------------------------EACDG
    MA_28767g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    supercontig_10.127_C W---------DYVGDNYVHRLI--QSKTDGKLVE-LNGHCMHAN-----------------------------------------------------------------------DSCGS
    28152.m000902_RICCO  W---------CFACDAYLDAQV--------------------------------------------------------------------------------------------------
    C.cajan_02948_CAJCA  W---------DYVGDNYVHRLI--QSKTDGKLVE-LNAQCAHAD-----------------------------------------------------------------------KGCGS
    GRMZM2G066169_P03_ZE W---------DYVGDSFVHRLN--QSKSDAKHAK-FKSKSKYSG-----------------------------------------------------------------------DECVN
    MA_85047g0010_PICAB  W-----------------------------------------------------------------------------------------------------------------------
    Gorai.009G125800.1_G W---------DYAGDNYVHRLI--QSKTDGKLVE-LNSHCLHAS-----------------------------------------------------------------------DGCGS
    MDP0000304270_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Phvul.002G052300.1_P W---------CFSCDAYLDAQL--------------------------------------------------------------------------------------------------
    selmo_89370_SELMO    W---------CFACDSYLDAQV--------------------------------------------------------------------------------------------------
    Sb04g005670.1_SORBI  W---------DYAGDNYVHRLI--QSKTDGKLVE-YNCHDDHTA-----------------------------------------------------------------------ESTCS
    GSVIVT01015569001_VI W---------DYVGDSFVHRLN--QSKADGKLAM-MDSRCMSTE-----------------------------------------------------------------------GDCGT
    orange1.1g015426m_CI W---------DYAGDNYVHRLI--QSKTDGKLVE-LNSHCLHGK-----------------------------------------------------------------------DNCGS
    selmo_403400_SELMO   W---------DYVGDNYVHRLI--QSKTDGKLVE-LNAPCQDAN--------------------------------------------------------------------------AS
    Ca_06690_CICAR       W---------DYVGDNYVHRLNQDQSKTDSKSEE-MRFRCMSQE-----------------------------------------------------------------------GDCGT
    Gorai.001G043700.1_G W---------DYVGDGYVHRLT--HSKVDGKPVE-INSRCTSIE-----------------------------------------------------------------------GTCHS
    GSVIVT01029385001_VI W---------CFSCDAYLDA----------------------------------------------------------------------------------------------------
    GSVIVT01013625001_VI W---------DYVGDNYVHRLI--QSKTDGKLVE-LNAHCAHAD-----------------------------------------------------------------------HGCGS
    orange1.1g016340m_CI W---------DYVGDNYVHRLN--QSKADGKLVE-MNSPCMSHE-----------------------------------------------------------------------AHCGT
    Solyc03g120000.2.1_S W---------DYAGDNYVHRLI--QSKTDGKLVE-LNHHGHHDS-----------------------------------------------------------------------DGCCS
    Medtr5g005150.1_MEDT W---------CFSCDAYLDAQV--------------------------------------------------------------------------------------------------
    Potri.007G063900.1_P W---------DYVGDNYVHRLI--QSKTDGKLVE-LNSPNVHAY-----------------------------------------------------------------------DCCGG
    Gorai.005G232800.1_G W---------CFACDSYLDAQL--------------------------------------------------------------------------------------------------
    GRMZM2G005205_P02_ZE W---------CFSCDSYLDVQA--------------------------------------------------------------------------------------------------
    GRMZM2G041561_P01_ZE W---------DYAGDNYVHRLI--QSKTDGKLVE-YNFHGDHTA-----------------------------------------------------------------------ESTCS
    cassava4.1_008621m_M W---------DYVGDNYVHRLN--QSKADGKLVD-MNTRCMSLE-----------------------------------------------------------------------GDYGT
    cassava4.1_033258m_M -----------------------------------------------------------------------------------------------------------------------S
    CMK309C_CYAME        W---------DYGSDSYVHRVL--LNEVDGKHAV-LEMRASTGS-----------------------------------------------------------------------RAVAA
    MDP0000335450_MALDO  W---------CFSCDAYLDAQL--------------------------------------------------------------------------------------------------
    Phvul.003G167400.1_P W---------DYVGDSYVHRLNQNQSKTDGKLEE-MNFRCMSLE-----------------------------------------------------------------------GDCDA
    AK251438.1_HORVU     W---------DYVGDSYVHRLN--HSKSDVKHAK-FSSKCEYPG-----------------------------------------------------------------------DNCVN
    Phvul.005G181500.1_P W---------DYVGDNYVHRLI--QSKTDGKLVE-LNTNCAHAD-----------------------------------------------------------------------NGCGS
    orange1.1g011525m_CI W---------DYVGDNYVHRLN--QSKADGKLVE-MNSPCMSHE-----------------------------------------------------------------------AHCGT
    GSMUA_Achr3P13360_00 W---------DYIGDNYVHRLI--QSKTDGKLVE-LNFHCAYAD-----------------------------------------------------------------------DKHGS
    evm_27.model.AmTr_v1 W---------DYVGDKHVHRLI--QSKTDGKLVE-LNSHCGSVD-----------------------------------------------------------------------DECGS
    Pp1s40_296V6.1_PHYPA W---------DYVGDGYVHRLI--QSKTDGKLVE-LPAPCRDGS-----------------------------------------------------------------------DDCCN
    Ca_02909_CICAR       W---------DYVGDNYVHRLI--QSKTDGKLVE-LNAHCVHED-----------------------------------------------------------------------SGCGS
    Tc00_g032110_THECC   W---------DYVGDNYVHRLI--QSKTDGKLVE-LNSHCLHAN-----------------------------------------------------------------------DGCGS
    Cc02_g19690_COFCA    W---------CFSCDAYLDAQV--------------------------------------------------------------------------------------------------
    MDP0000266286_MALDO  W---------DYVGDAYVHRLN--QSKVDGKIINFTDSHCMSLE-----------------------------------------------------------------------EAFDG
    EG4P66601_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Solyc07g008050.2.1_S W---------DYVGDKYVHRLN--QSKGDSKLVT-VNSRCTATE-----------------------------------------------------------------------GECTT
    Cucsa.132280.1_CUCSA W---------DYVGDNYVHRLN--QWKVDCKFGE-MNPHCMSHE-----------------------------------------------------------------------GECGT
    Pp1s14_283V6.1_PHYPA W---------CFECDHYLDAQV--------------------------------------------------------------------------------------------------
    EG4P15130_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    orange1.1g018432m_CI W---------DYVGDNYVHRLN--QSKADGKLVE-MNSPCMSHE-----------------------------------------------------------------------AHCGT
    Ostta4_35565_OSTTA   W---------CYACETYVDPSS--------------------------------------------------------------------------------------------------
    Os02g09060.1_ORYSA   W---------DYAGDNYVHRLI--QSKTDGNLVE-YNFYGDHSV-----------------------------------------------------------------------DGMCS
    PGSC0003DMP400053855 W---------DYVGDKYVHRLN--QSKGDSKLVT-VNSRCTATE-----------------------------------------------------------------------GECTT
    27446.m000481_RICCO  W---------NYISDNYVHRLI--LSKTDGKLVE-LNSHCVHAN-----------------------------------------------------------------------DGCGS
    Potri.009G090100.1_P W---------CFACDSYLDARV--------------------------------------------------------------------------------------------------
    PDK_30s766901g002_PH W---------DYVGDNYVHRLI--QSKTDGKLVE-LNFHCPHGD-----------------------------------------------------------------------DMCGS
    29927.m000605_RICCO  W---------DYVGDNYVHRLN--QSKADAKLVD-MNSR----E-----------------------------------------------------------------------GDCGT
    AT2G42160.1_ARATH    W---------DYVGDSYVHRLN--HSKIDGKSVE-MSTSCLSHQ-----------------------------------------------------------------------GDCGL
    evm_27.model.AmTr_v1 ----------SFTLLPQLNRN---------------------------------------------------------------------------------------------------
    MA_494524g0010_PICAB W---------CFSCDAYLDAQV--------------------------------------------------------------------------------------------------
    MA_79946g0010_PICAB  Y---------IFNNSCVF------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1001547 W---------CFACDSYLDVQA--------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando W---------DYVGDRYVHRLN--QSRSDDKLAK-LKSNSRYVS-----------------------------------------------------------------------ENCIN
    GSMUA_Achr3P30140_00 W---------CFECDAYLDVQM--------------------------------------------------------------------------------------------------
    orange1.1g019425m_CI W---------DYVGDNYVHRLN--QSKADGKLVE-MNSPCMSHE-----------------------------------------------------------------------AHCGT
    Glyma15g00770.2_GLYM W---------DYVGDNYVHRLI--QSKTDGKLIE-LNTQCAHAD-----------------------------------------------------------------------NGCGS
    orange1.1g014500m_CI W---------DYVGDNYVHRLN--QSKADGKLVE-MNSPCMSHE-----------------------------------------------------------------------AHCGT
    Sb06g030620.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    PDK_30s709101g009_PH W---------DYVGDSYVHRLN--QSKSDDKLVK-LKSQCRSVG-----------------------------------------------------------------------DNCVS
    GRMZM5G896756_P02_ZE F-----------------------------------------------------------------------------------------------------------------------
    Os12g32374.1_ORYSA   W---------CFACDSYLDVQS--------------------------------------------------------------------------------------------------
    cassava4.1_018065m_M W---------CFTCDAYLDAQV--------------------------------------------------------------------------------------------------
    Bradi3g06180.1_BRADI W---------DYAGDNYVHRLI--QSKTDGKLVE-YNCYGDHGA-----------------------------------------------------------------------DGMCS
    PGSC0003DMP400009626 W---------CFSCNAYLDAQV--------------------------------------------------------------------------------------------------
    Solyc10g049650.1.1_S W---------CFSCNAYLDAQV--------------------------------------------------------------------------------------------------
    Glyma07g14551.1_GLYM W---------DYVGDNYVDRLI--QSKTDGMLVE-MNTQCAHAD-----------------------------------------------------------------------NGCGS
    orange1.1g014488m_CI W---------DYVGDNYVHRLN--QSKADGKLVE-MNSPCMSHE-----------------------------------------------------------------------AHCGT
    Bradi4g06630.1_BRADI W---------CFACDSYLDAQS--------------------------------------------------------------------------------------------------
    C.cajan_01900_CAJCA  W---------DYVGDSYVHRLNQNQSKTDGKLEE-MNLRCMSLE-----------------------------------------------------------------------GDCGM
    GSVIVT01037858001_VI W---------CFSCDAYLDAQA--------------------------------------------------------------------------------------------------
    PGSC0003DMP400009872 W---------DYAGDNYVHRLI--QSKTDGKLVE-LNHHGHHDS-----------------------------------------------------------------------DGCCS
    C.cajan_21844_CAJCA  W---------CFSYDAYLDAQL--------------------------------------------------------------------------------------------------
    ITC1587_Bchr3_P06352 W---------DYVGDNYVHRLI--QSKTDGKLVE-LNFHCAHAD-----------------------------------------------------------------------DKHGS
    Glyma01g45400.1_GLYM W---------CFSCDAYLDPQL--------------------------------------------------------------------------------------------------
    Bradi5g23970.1_BRADI W---------DYVGDSYVHRLN--HSKSDVKHAK-FKSKCEYSG-----------------------------------------------------------------------DNCVN
    chr1.CM0088.530.r2.d W---------CFSCDAYLDAQL--------------------------------------------------------------------------------------------------
    Sb08g016307.1_SORBI  W---------CFSCDSYLDVQA--------------------------------------------------------------------------------------------------
    Os04g55480.1_ORYSA   W---------DYVGDSYVHRLN--HSKSDVKHSK-FKSKCKYSG-----------------------------------------------------------------------DKCAN
    EG4P66602_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1002888 ------------------------------------------------------------------------------------------------------------------------
    supercontig_106.73_C W---------CFSCDAYLDTQV--------------------------------------------------------------------------------------------------
    cassava4.1_006523m_M W---------DYVGDNYVHRLN--QSKADGKLVD-MNTRCMSLE-----------------------------------------------------------------------GDYGT
    Medtr4g114970.1_MEDT W---------DYVGDNYVHRLNQDQSRIDGK-SE-MHVHCMSLE-----------------------------------------------------------------------GECDT
    orange1.1g023654m_CI W---------CFACHAYLNAQA--------------------------------------------------------------------------------------------------
    orange1.1g032009m_CI W---------CFTCDAYLNAQV--------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomP W---------DYVGDRYVHRLN--QSRSDDKLAK-LKSNSRYVG-----------------------------------------------------------------------ENCIN
    Cc06_g08180_COFCA    W---------DYVGDKYVHRLN--QSKADGKSGV-MNSHCISNE-----------------------------------------------------------------------GECGT
    MDP0000279102_MALDO  W---------DYVGDAYVHRLN--QSKVDGKIINFTDSHCMSLE-----------------------------------------------------------------------EAFDG
    selmo_227454_SELMO   W---------DYVGDNYVHRFI--LSKTDGNLME-LMAP---SS-----------------------------------------------------------------------DECSG
    Cucsa.105760.1_CUCSA W---------DYAGDNYVHRLI--QSKTDGKLVE-LNSYCAHAN-----------------------------------------------------------------------DGCMS
    MLOC_18786.1_HORVU   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.800.r2.a ------------------------------------------------------------------------------------------------------------------------
    MDP0000191872_MALDO  W---------DYAGDNYVHRLI--QSKTDGKLVE-LNSPFI---------------------------------------------------------------------------GCQS
    evm_27.model.AmTr_v1 W---------DYVGDNYVHRLI--QSKTDGKLVE-LNYHCRHGD-----------------------------------------------------------------------D----
    ITC1587_BchrUn_rando ------------------------------------------------------------------------------------------------------------------------
    LjSGA_019478.1_LOTJA W---------DYAGDNYVHRLI--LSKTDGKLVE-LNSHCAHAD-----------------------------------------------------------------------SGCGS
    Ostta4_38022_OSTTA   W---------CYACETYVDPSS--------------------------------------------------------------------------------------------------
    Cc11_g03280_COFCA    W---------DYAGDNYVHRLI--QSKTDGKLVA-LNHRCAWAN-----------------------------------------------------------------------DGCGT
    AT2G14830.2_ARATH    W---------CFCCEAYLDAQI--------------------------------------------------------------------------------------------------
    Glyma17g12120.1_GLYM W---------DYVGDNYVHRLNQDQSKIDGKLEE-MNFHCMSLE-----------------------------------------------------------------------GECGM
    Potri.018G128100.1_P W---------DYVGDNYVHRLN--QSKTDGKSID-TNSCCVSFE-----------------------------------------------------------------------GDCGT
    MDP0000335452_MALDO  W---------CFSCDAYLDAQL--------------------------------------------------------------------------------------------------
    Medtr6g012470.1_MEDT LPITLTNWPSCYSILAHIFDLN--------------------------------------------------------------------------------------------------
    Millet_GLEAN_1003072 W---------DYAGDNYVHRLI--QSKTDGKLVE-YNCHGGHTA-----------------------------------------------------------------------ENTCS
    Cre10.g454400.t1.3_C W---------DYVGDNYVHRLI--QSKTDGKLVE-LAAPAGAVTSPHAGMRGGGGHFHGGGAAAAAGGGGGLPCTPAGGAAGGGAAAHRGHGHSSDGDICGASCGAGGGGGGARGDDCGP
    AT2G26000.2_ARATH    W---------DYAGDNYVHRLI--QSKTDGKLVE-LNSHGSLSK-----------------------------------------------------------------------DGCGS
    MDP0000255931_MALDO  W---------DYVGDAYVHRLN--QSKVDGKIINFTDSHCMSLE-----------------------------------------------------------------------EAFDG

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                               1570      1580      1590      1600      1610      1620      1630      1640      1650      1660      1670      1680
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    Glyma13g22710.1_GLYM CE----------------------------------CREDLGINGALFNSKVET--------------IVDEYNRLLTSQLETQRQYYES-LLVEAKSKMESSMSE-------------A
    MA_10428609g0020_PIC --------------------------------------------------------------------------------IAQLHQAYETGHLLEFRVEPPHRFDGNGIEVHF-------
    supercontig_46.26_CA CA----------------------------------FSEESGISGALFNSKVEA--------------IVDEYNHLLASQLEAQRQHYES-LLIEAKTRRENSIAG-------------T
    Glyma09g17743.1_GLYM CS----------------------------------SE-DNAMNEAILNSKLEA--------------IY-----------------------------------L-------------A
    orange1.1g015431m_CI CD----------------------------------CV-DSGTSDALLSSKVEA--------------IVNEYNELLAAQLENQKIYYET-LLQEAKEETEKIISE-------------A
    MDP0000210436_MALDO  --------------------------------------------------------------------------------IPQLRPVYETAYILKFGEAPPFRTV---------------
    MA_508435g0010_PICAB CE----------------------------------CSNDAGFESVLLDSKIEA--------------IADEYNNLLTSQLENQRQYYDS-LLAEARQHRDAAVSE-------------A
    Medtr2g104600.1_MEDT -S----------------------------------CG-DNAMREAILNSKVQA--------------IVNEYNELLATQLENQKLYFES-LLQQVEQETEGKISV-------------A
    Potri.005G110500.1_P CE----------------------------------CA-DSGVSEALLKSKVEA--------------IVNEYNELLATQLENQKLYFDT-LLEEVKEETEREISE-------------A
    Millet_GLEAN_1001828 CT----------------------------------CDDDSDMGGAMFSSKAET--------------IVDEYNRLLASQLETQREYYEG-LLSEAKRNKERRISE-------------A
    C.cajan_29736_CAJCA  --------------------------------------------------------------------------------IPQLRPVYQLAYILKFGEPPPLLPSDQHHLPSATSV----
    MA_2413g0010_PICAB   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006182m_M CD----------------------------------CV-NSGISDALLNSKVEA--------------IVNEYNELLATQLENQKLYFEN-LLQEAREETEREISE-------------A
    Ostta4_34845_OSTTA   CS---------------------------PNRAPDVSDLDAELEEALVASKLDA--------------IASEYDLLLTSQLESQRKYFEN-LLEAATARVEGTITREDEENRNAATLARA
    Tc02_g010060_THECC   --------------------------------------------------------------------------------IRQLRPVHETAYILKFGEAPPHRLEECPQIEDKQAKDMPS
    chr4.CM0003.790.r2.a CE----------------------------------CPEDLGINGALINSKVEA--------------IVDEYNRLLASQLETQRQHYES-LLVEAKSKAESSLSE-------------A
    MDP0000313787_MALDO  CE----------------------------------CSADSGISGALYSSKVDTVCTLASAIHVVLXQIVDEYNRLVASQLENQRQYYES-LLMEAKSKKESSISE-------------A
    MA_28767g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    supercontig_10.127_C CG----------------------------------CA-DSGISEALLNSKVDA--------------IVNEYNELLATQLENQKLYFET-LLQEVKEETEREISE-------------A
    28152.m000902_RICCO  --------------------------------------------------------------------------------IMQLRPVYETAYILKFGEAPPFRAVELTQ------DTTSS
    C.cajan_02948_CAJCA  CS----------------------------------CE-DNAISEAMLNSKVEA--------------IVNEYNELLATQLENQKLYFES-LLQEVKEESERKISK-------------A
    GRMZM2G066169_P03_ZE CS----------------------------------CNDDSDMGGAMFSSKAET--------------IVDEYNRLLASQLETQREYYEG-LLSEAKRNKEHQISE-------------A
    MA_85047g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Gorai.009G125800.1_G CH----------------------------------CI-DSGVNEAMLTCETE---------------IVNEYNELLRTQLENQKVYFET-LLQQENEETERAIAD-------------A
    MDP0000304270_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Phvul.002G052300.1_P --------------------------------------------------------------------------------IPQLRPVHQLAYIMKFGEPPPLIQHQPSSSATSD------
    selmo_89370_SELMO    --------------------------------------------------------------------------------ISELRPAFDAAHAMKFGTPAPLRC----------------
    Sb04g005670.1_SORBI  L-----------------------------------CSGDAAMSEALLNSKFEA--------------IVEEYNDLVTFQLEKQRNYYES-LLLEVKEETEREISA-------------A
    GSVIVT01015569001_VI YG----------------------------------CTDDSGISAALFSSKVEA--------------IVDEYNHLLATEMETQRQYYES-LLLEAKAKRESSVLE-------------A
    orange1.1g015426m_CI CD----------------------------------CV-DSGTSDALLSSKVEA--------------IVNEYNELLAAQLENQKIYYET-LLQEAKEETEKIISE-------------A
    selmo_403400_SELMO   CE----------------------------------CSGGMDFAEAISRSKIDA--------------AKYDYEHLLSVQMESQRQHHEL-LMAQALEERAKSFKDREK----------E
    Ca_06690_CICAR       CE----------------------------------CHEDLEVSGAFFNSKVEA--------------IVDEYNRLLTSQLETQRQYYES-LLVEAKSKAESSISE-------------A
    Gorai.001G043700.1_G CG----------------------------------YGDDSGINEAIYSSKVEA--------------VFDEYSRLLATELEKQRQNYES-LLAEAKGKRDSTIAE-------------A
    GSVIVT01029385001_VI ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01013625001_VI CD----------------------------------CSDDAGISEVLLNSRVEA--------------IVNEYSDLLTTQLENQKLYFES-LLREVKEETEREISE-------------A
    orange1.1g016340m_CI CE----------------------------------CSEDSGISGALFNSKVEA--------------IVDEYNRLLATQLETQRQYYES-LLAEAKSKRESLIPE-------------T
    Solyc03g120000.2.1_S CE----------------------------------CGTDPGFSETILNSKVEA--------------IVNEYNDLLTSQLEDQKMYFES-LLQEAEEEIERETKE-------------A
    Medtr5g005150.1_MEDT --------------------------------------------------------------------------------IQQLRPVHEVAYILKFDEPPPVVAS---------------
    Potri.007G063900.1_P CD----------------------------------CA-DSGVSEALLNSKVEA--------------IVNEYNELLATQLENQNLFFGT-LLEEVEEETEREISK-------------A
    Gorai.005G232800.1_G --------------------------------------------------------------------------------IQQLRPFHETAYILKFGQAPPFRSVESSRVDDKPAMDVPS
    GRMZM2G005205_P02_ZE --------------------------------------------------------------------------------ILELRPVYEVAHLLKFGQRPPFRSLDVQDSGTGESGSVSR
    GRMZM2G041561_P01_ZE L-----------------------------------CSGDAAMDEALLNSKFEA--------------IVEEYNDLVTFQLEKQRNYYES-LLLEVKEETEKEISA-------------A
    cassava4.1_008621m_M CG----------------------------------CSEDSGISGALFSSKVET--------------IVDEYNRLLANQLEAQRQNYES-LIADLRSKRESSINE-------------V
    cassava4.1_033258m_M CD----------------------------------CV-NSGISEALLNNKVEA-----------------------------------T-LLHEVKEETEREISK-------------A
    CMK309C_CYAME        SG-----------VPYHSDGGANAPASSSQRSAPEIDEERTQLFAATIASKVDS--------------LSQEYEMLLLSQLESQRLWYEA-KATE-------------------------
    MDP0000335450_MALDO  --------------------------------------------------------------------------------IPQLRPVYETAYILKFGEAPPFRTVX--------------
    Phvul.003G167400.1_P CE----------------------------------CREDLGINGALFNSKVET--------------IVDEYNRLLTSQLETQRQYYES-LLLEARSKTESSMTE-------------A
    AK251438.1_HORVU     C-----------------------------------MHDDSDMGGVMFSSKADT--------------IVDEYNRLLASQLETQREYYEA-LLSEAKKEREHHISV-------------A
    Phvul.005G181500.1_P CS----------------------------------CE-DNAMSEAMLNSKVEA--------------IVNEYNELLATQLENQKIYFES-LLQEVKEESERKISK-------------A
    orange1.1g011525m_CI CE----------------------------------CSEDSGISGALFNSKVEA--------------IVDEYNRLLATQLETQRQYYES-LLAEAKSKRESLIPE-------------T
    GSMUA_Achr3P13360_00 CE----------------------------------CSEESGFNEALLNSKLEA--------------IIEEYNDLLTSQLDNQRKHYES-VLLEIKEETEEKISE-------------S
    evm_27.model.AmTr_v1 CE----------------------------------YSGDSGVSAALFNSKFEA--------------IVDEYNHLLANQLESQRQYYES-LLVETKEQKDRTVSA-------------A
    Pp1s40_296V6.1_PHYPA RG-----------------------------------PDDQSMEAALYHSKVDA--------------VAAEYDHLLTIQLDSQRQYYEG-RITEMEEERALAVQQ-------------A
    Ca_02909_CICAR       CS----------------------------------CG-DNVMREAMLNSKVEA--------------IVNEYNELLATQLENQKLYFES-LLQQVEQETERKISV-------------A
    Tc00_g032110_THECC   CD----------------------------------CA-DSGISEAILSCKAEV--------------IVNEYNELLRTQLENQKLYYET-LLQQVNEETEREIAD-------------A
    Cc02_g19690_COFCA    --------------------------------------------------------------------------------ILPLRPVYETAYILKFGEAPPFRALVDLHLADHKAEGSSS
    MDP0000266286_MALDO  CE----------------------------------CSADSGISGALYSSKVDTL-----TLDVVLKQIVDEYNRLVASQLENQRQYYES-LLMEAKSKKKSTISE-------------A
    EG4P66601_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Solyc07g008050.2.1_S CG----------------------------------DDEDSSFSGALFSSKVDS--------------IVDEYNNLLASQLETQRQHYES-LLAEAKSGKESSISR-------------A
    Cucsa.132280.1_CUCSA CE----------------------------------YDENSGINEALYHSKVEA--------------IVDEYNRLLATQLETQRQYYES-LLAEAKSKKEISISE-------------A
    Pp1s14_283V6.1_PHYPA --------------------------------------------------------------------------------ISQLRPIFEALHLMKFGDPAPPRAELRSGDPITLQLS---
    EG4P15130_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    orange1.1g018432m_CI CE----------------------------------CSEDSGISGALFNSKVEA--------------IVDEYNRLLATQLETQRQVSTS-F----------------------------
    Ostta4_35565_OSTTA   --------------------------------------------------------------------------------FENVAERVESMLRARAC-----------------------
    Os02g09060.1_ORYSA   T-----------------------------------CNGDAGISEALLDSKMEA--------------IVEEYNDLVTSQLEKQRNYYES-LLLEVKEDNEKEIAA-------------A
    PGSC0003DMP400053855 CG----------------------------------DDEDSSFSGALFSSKVDS--------------IVDEYNNLLASQLETQRQHYES-LLAEAKSGKESSISR-------------A
    27446.m000481_RICCO  CE----------------------------------CV-NTGISEALLNSKVEA--------------IVNEYNELLATQLETQKLYFET-LLQEVKEETEREISE-------------A
    Potri.009G090100.1_P --------------------------------------------------------------------------------IIQLKPVSETAHILKFGEAPPFRSVECSKGNQADGGASSD
    PDK_30s766901g002_PH CE----------------------------------CSADSGISEVLLNSKVEA--------------IVVEYNDLLTSQLENQRKYFES-LLLEVKEQNEKEISE-------------A
    29927.m000605_RICCO  CG----------------------------------CSEDSGISGALFSSKVET--------------IVDEYNHLLATQLKAQRQYYES-LITEVKNKRESSILE-------------A
    AT2G42160.1_ARATH    CE----------------------------------CSEDTGISGAIFNSKVDS--------------IVIEYNDLLASQLKGQRQYYES-LIVEARSKQESSIAE-------------A
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    MA_494524g0010_PICAB --------------------------------------------------------------------------------IAQLRPAYETRHLLKFRVETPHRFDGNGIELHF-------
    MA_79946g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1001547 --------------------------------------------------------------------------------ILELRPVYEVAHLLKFGERPPFRSLEVLDLSTGENRISSS
    ITC1587_BchrUn_rando CE----------------------------------CSDDLGSSGAILNSKVDV--------------IVDEYNHLLAGQLESQRQYYET-LLQKEKENREKYISD-------------A
    GSMUA_Achr3P30140_00 --------------------------------------------------------------------------------IWQLRPVYEVAHLLKFEERPSFRAIESLQLSSDQGEGS--
    orange1.1g019425m_CI CE----------------------------------CSEDSGISGALFNSKVEA--------------IVDEYNRLLATQLETQRQYYES-LLAEAKSKRESLIPE-------------T
    Glyma15g00770.2_GLYM CS----------------------------------CE-DNAMNEAILNSKVEA--------------IVNEYNELLATQLENQKLYFES-LLQEVKEESERKISK-------------A
    orange1.1g014500m_CI CE----------------------------------CSEDSGISGALFNSKVEA--------------IVDEYNRLLATQLETQRQYYES-LLAEAKSKRESLIPE-------------T
    Sb06g030620.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    PDK_30s709101g009_PH CT----------------------------------CSDDSGISGALLGSKVEA--------------IVDEYNHLLASQLENQRQYYET-LLQEAKEKREKYISE-------------A
    GRMZM5G896756_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    Os12g32374.1_ORYSA   --------------------------------------------------------------------------------ILELRPVYEVAHLMKFGQRPPFRSLDVLDLSSGQNGGSPS
    cassava4.1_018065m_M --------------------------------------------------------------------------------IMQLRPVYETAYILKFGEAPPFRTVELPQ------DSTST
    Bradi3g06180.1_BRADI I-----------------------------------CSGDAGMDEALLNSKVEA--------------IVEEYNDLLTSQLDKQRNYYEA-LLLEVKEENEKEISA-------------A
    PGSC0003DMP400009626 --------------------------------------------------------------------------------IMPLQSVHFTAYVLKFNEPPPLRAVECVHITDNRADGSST
    Solyc10g049650.1.1_S --------------------------------------------------------------------------------IMPLQSVHFTAYVLKFNEPPPLRAVECVHITDNKADGSST
    Glyma07g14551.1_GLYM CS----------------------------------CE-DNAMNEAILNSKLEA--------------VTYV------------------------------------------------
    orange1.1g014488m_CI CE----------------------------------CSEDSGISGALFNSKVEA--------------IVDEYNRLLATQLETQRQYYES-LLAEAKSKRESLIPE-------------T
    Bradi4g06630.1_BRADI --------------------------------------------------------------------------------ILELRPVYEVAHLLKFGERPPFRTLEVLDLSSGQTGSSSL
    C.cajan_01900_CAJCA  CE----------------------------------CREDLGINGALFNSKVET--------------IVDEYNRLLTSQLETQRQYYEC-LLVETKSKLESSMSE-------------A
    GSVIVT01037858001_VI --------------------------------------------------------------------------------ILQLHPVYETAYILKFGQAPPFPTTDNQA------EASTS
    PGSC0003DMP400009872 CE----------------------------------CGTDPGFSETILNSKVEA--------------IVNEYNDLLTSQLEDQKMYFES-LLQDVEEEIESETKE-------------A
    C.cajan_21844_CAJCA  --------------------------------------------------------------------------------IPQLRPVYQLAYILKFGEPPPLLPSDQHHLPSATSLQS--
    ITC1587_Bchr3_P06352 CE----------------------------------CSEESGFDEALLNSKLEA--------------IIEEYNDLLTSQLDNQRKYYES-VLLEIKEETEKKISE-------------S
    Glyma01g45400.1_GLYM --------------------------------------------------------------------------------IPQLRPLHQLAYILKFGQPPPIPSPSL-------------
    Bradi5g23970.1_BRADI CS----------------------------------CNDHSDMGGAIFSSKTET--------------IVDEYNRVLASQLETQREYYEA-LLSEAKKEREQHISV-------------A
    chr1.CM0088.530.r2.d --------------------------------------------------------------------------------IAQLRPVYQLAYLLKFGEPPPLRPTQLPSIQTSSGI----
    Sb08g016307.1_SORBI  --------------------------------------------------------------------------------ILELRPVYEVAHLLKFGERPPFRSLEVLDLTTGESGSASR
    Os04g55480.1_ORYSA   CS----------------------------------CNDEEDIGGAIFSSKAET--------------IVDEYNRLLASQLETQREYYEA-RLSEAKKEKEQHISD-------------A
    EG4P66602_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1002888 ------------------------------------------------------------------------------------------------------------------------
    supercontig_106.73_C --------------------------------------------------------------------------------IRQLRPVYETAYILKFGEAPPFRTDEHASMENEKDKDILP
    cassava4.1_006523m_M CG----------------------------------CSEDSGISGALFSSKVET--------------IVDEYNRLLANQLEAQRQNYES-LIADLRSKRESSINE-------------V
    Medtr4g114970.1_MEDT CE----------------------------------CSEDLEVNGAFFNSKVEA--------------IVDEYNRLLTSQLETQRQYYES-LLIEARSKEESSISE-------------A
    orange1.1g023654m_CI --------------------------------------------------------------------------------ILQLQPVHETAYVLKFGRALPFLMGEHPKV----------
    orange1.1g032009m_CI --------------------------------------------------------------------------------IPQLRPVYETAYILKFGEAPPIHIGEHPKVEDQ-------
    GSMUA_AchrUn_randomP CE----------------------------------CSDDLGSSGAILNSKVDV--------------IVDEYNHLLAGQLESQRQYYET-LLQKEKENREKYISD-------------A
    Cc06_g08180_COFCA    CG----------------------------------YEEDSGLDGVLFSSKVET--------------TVDEYNHLLASQLEIQRQHYES-LLAEAKNSQDSTISK-------------A
    MDP0000279102_MALDO  CE----------------------------------CSADSGISGALYSSKVDTL-----TLDVVLKQIVDEYNRLVASQLENQRQYYES-LLMEAKSKKKSTISE-------------A
    selmo_227454_SELMO   CE----------------------------------CSGGSDAFERSCDTKLDS--------------LKKEYEILQAKQLESQSKYYEG-RLVQIVEEQEHEIAS-------------A
    Cucsa.105760.1_CUCSA CG----------------------------------GL-DAATSEALLNSRVEL--------------IVNEYNELLTGQLENQKLYFES-LLLEVKEETEREISR-------------A
    MLOC_18786.1_HORVU   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.800.r2.a ------------------------------------------------------------------------------------------------------------------------
    MDP0000191872_MALDO  CD----------------------------------CV-DSEYSEALLNSK-----------------IVNEYNELLATQLENQKVYFES-LLQEVKEGTEQEISN-------------A
    evm_27.model.AmTr_v1 ------------------------------------CGADTGISEALLNSKVEA--------------IVKEYNDLLTSQLENLRKYYES-LLVEVKEETDRAISD-------------A
    ITC1587_BchrUn_rando ------------------------------------------------------------------------------------------------------------------------
    LjSGA_019478.1_LOTJA CS----------------------------------CE-DSAVSEAIHNSKVEA--------------IVNEYNELLASQLERPK-----------------------------------
    Ostta4_38022_OSTTA   --------------------------------------------------------------------------------FENVAERXX-------------------------------
    Cc11_g03280_COFCA    CE----------------------------------CGLEPGIGDALLNSKVEA--------------IVNEYNELLTTQLENQKMYFES-LLENIEQETEQGISK-------------A
    AT2G14830.2_ARATH    --------------------------------------------------------------------------------ILQLRPIHQAAYILKFGEAPPLPQ----------------
    Glyma17g12120.1_GLYM CE----------------------------------CREDLGINGALFNSKVET--------------IVDEYNRLLTSQLETQRQYYES-LLVETKSKMESSMSE-------------A
    Potri.018G128100.1_P CG----------------------------------CSEDSGISGALFSSKVEA--------------IADEYNRLLATQLEAQRQHYES-LIIEAKSKRQSSISE-------------A
    MDP0000335452_MALDO  --------------------------------------------------------------------------------IPQLRPVYETAYILKFGEAPPFRTVX--------------
    Medtr6g012470.1_MEDT --------------------------------------------------------------------PLNSYHPKLKLVIPHDDTSTTS------------------------------
    Millet_GLEAN_1003072 L-----------------------------------CSGDAAMSEALLNSKFEA--------------IVEEYNDLVTSQLEKQRNYYESRLLVEDKEETE-EISA-------------A
    Cre10.g454400.t1.3_C GGGGGGGAGGRYAGAYGGGRYDGGAGGSGGGGMPGWSSADEELKEALMASKLDA--------------IAAEYNHLLASQLDSQRQYFEG-LVAQATLTADHRCAQAGA----------A
    AT2G26000.2_ARATH    CE----------------------------------YS-DSGMTDALLNSKVDM--------------IISEYNELLQAQLENQKQYFEK-LLQNVKEETEQKISE-------------A
    MDP0000255931_MALDO  CE----------------------------------CSADSGISGALYSSKVDTL-----TLDVVLKQIVDEYNRLVASQLENQRQYYES-LLMEAKSKKKSTISE-------------A

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                               1690      1700      1710      1720      1730      1740      1750      1760      1770      1780      1790      1800
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    Glyma13g22710.1_GLYM VEKAAA------------------S--EMQDIQ-------NELEKCTEER-----------------NAIAEVNQKLIKNQEIWRKKFKEAEE-----------------REAKSIKLMN
    MA_10428609g0020_PIC ------------------------------------------------------------------------------------------------------------------------
    supercontig_46.26_CA IEKAIA------------------S--QMQDIQ-------SKLEKCEGEK-----------------DAVAEINRYLIKDQEIWRKKVKEIEE-----------------RVISTLRSKD
    Glyma09g17743.1_GLYM VQKAIS------------------L--KHQKIQ-------SKIDRCKKDK-----------------KFLDDLNKNLVKNEDIWKTKIL-------------------------------
    orange1.1g015431m_CI VKKAIA------------------Q--KLQKMQ-------AKLDRCVREK-----------------KFLDDLNENLLKNQEMWKAKISEIEE-----------------REKMALRAKD
    MDP0000210436_MALDO  ------------------------------------------------------------------------------------------------------------------------
    MA_508435g0010_PICAB TQKATN------------------V--KLQKLQ-------AKVEQCTKEN-----------------TFLSELNKNLIANQELWRKKVEEIEQ-----------------REQLAITARD
    Medtr2g104600.1_MEDT VQKAVS------------------L--KQHKIH-------AKIDRCNKEK-----------------KFLDELNDNLLKNEEIWKAKLLEIEE-----------------REKKALKLTT
    Potri.005G110500.1_P VKKAIA------------------Q--KLQKLQ-------AKLDRCIKEK-----------------KFLDDLNENLVKNQEIWKAKISEIEE-----------------REKMALKIKD
    Millet_GLEAN_1001828 VDKAVN------------------D--KLQELQ-------LKLENLMAEK-----------------KKVADKNEKLTRSQDMWRQTLRDIEE-----------------REKAQLKSKD
    C.cajan_29736_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    MA_2413g0010_PICAB   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006182m_M IKKALA------------------Q--KSQKLQ-------AKLDRCLKEK-----------------KFLDELNENLLKNQEIWTAKILEIEE-----------------REKKALKVKD
    Ostta4_34845_OSTTA   VDEAKN------------------AKRELSAAQKANARHVKTIEGLRSEI-----------------KHLQTLCDTLGENVEAFKAQGERAEK-----------------RKTVEIRLKD
    Tc02_g010060_THECC   G-----------------------S-----------------------------------------------------------------------------------------------
    chr4.CM0003.790.r2.a VEKAAT------------------S--EMQDIQ-------NELEKCTEER-----------------DAVAEVNRKLIKNQEMWRNKVKEAEQ-----------------WEATSMESFN
    MDP0000313787_MALDO  VEKAVN------------------S--KMQDLQ-------AKLGKYLEEK-----------------NDVADINRNLIKDQETWRRKLKEIDESEFFRIGILRDSNSVSFREAASLRLRE
    MA_28767g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    supercontig_10.127_C VNKAVG------------------Q--KLQRMK-------AKLDRCVKEK-----------------KFLDDLNENLLKNQDIWKAKILEMEE-----------------REKKALRVKD
    28152.m000902_RICCO  S-----------------------S-----------------------------------------------------------------------------------------------
    C.cajan_02948_CAJCA  VQKTIS------------------L--KQQKIQ-------TKIDRCKKEK-----------------KFLDDLNENLVKNEEIWKTKLLEIEE-----------------REKKVTRLMD
    GRMZM2G066169_P03_ZE ADKAVS------------------D--KLEEMQ-------LKLENLIVEK-----------------KKVADMNEKLTRSQDMWRQTLRDIEE-----------------RERAQLKSKD
    MA_85047g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Gorai.009G125800.1_G FNKTVM------------------Q--KRQKMQ-------AKLERCVKEK-----------------KFLEDLNENLLKNQEIWKAKLLEVEK-----------------REKKVLRMKG
    MDP0000304270_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Phvul.002G052300.1_P ------------------------------------------------------------------------------------------------------------------------
    selmo_89370_SELMO    ------------------------------------------------------------------------------------------------------------------------
    Sb04g005670.1_SORBI  TEKAMS------------------I--KLQKLE-------AKFEKFREEK-----------------RFLDEVNGNLVKNQEMWIETIRKAQA-----------------REQAALRLKD
    GSVIVT01015569001_VI VEKAVT------------------S--KMQDIQ-------NELEKCLEEK-----------------KAVSDINQKLIKNQDLCRKKVKEIEE-----------------REILAIRSKD
    orange1.1g015426m_CI VKKAIA------------------Q--KLQKMQ-------AKLDRCVREK-----------------KFLDDLNENLLKNQEMWKAKISEIEE-----------------REKMALRAKD
    selmo_403400_SELMO   IERGVS------------------L--KLQTMQ-------DTIRKAEEEK-----------------AFLEQMNECLRKNQEEWRTKYRQLEE-----------------NQALLIKERD
    Ca_06690_CICAR       VEKATT------------------S--GMLDIQ-------NELEKCTEER-----------------NAVAEVNRNLIKNQETWRKKVKEAEE-----------------REAASIKSTD
    Gorai.001G043700.1_G VEKAVT------------------S--EMQDIQ-------SKLDKCTEEK-----------------NALAEINRKLIKDQQVWHIKVKEIEE-----------------REASESRLMD
    GSVIVT01029385001_VI ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01013625001_VI VEKAVT------------------L--KLQKLQ-------AKLDKCVKEK-----------------KFLDDLNENLLQNQEIWEAKMKEIEE-----------------RERKVLKLKD
    orange1.1g016340m_CI VEKAVA------------------S--KMQDIQ-------NELDICEEAK-----------------KAVADVNSKLIKNQEIMRKKFKEIEE-----------------REITSLRLRD
    Solyc03g120000.2.1_S VEKVLC------------------QNPRLMKLK-------VRLDKCVEEK-----------------KFHDDINDNLTRNKEIWEAKILEIEE-----------------REKAALKMKD
    Medtr5g005150.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Potri.007G063900.1_P VKKAIA------------------Q--KLQKFQ-------AKLDRCIKEK-----------------KFLDDLNENLVKNQEIWKAKISEIEE-----------------REKMALKIKD
    Gorai.005G232800.1_G S-----------------------S-----------------------------------------------------------------------------------------------
    GRMZM2G005205_P02_ZE A-----------------------------------------------------------------------------------------------------------------------
    GRMZM2G041561_P01_ZE TEKAMS------------------T--KLQKLE-------VKFDKCMEEK-----------------KFLDEVNGNLVKNQEMWIETIRKAQA-----------------REQAALRLKD
    cassava4.1_008621m_M VDKAVT------------------S--TMQDIQ-------TKLEKCEQEK-----------------DAVAEINRSLIKNQEIWRKKVKEVEE-----------------RETAALRSRD
    cassava4.1_033258m_M VKKAVT------------------H--KLQANH-------CVLQRM--------------------------------------------------------------------------
    CMK309C_CYAME        LERAWS------------------K--RVQELE-------QRLERLSKPKCSRDAATGDGAGNEFDAKLLRELNERLLRDAAAWREQVERLK------------------RER-------
    MDP0000335450_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Phvul.003G167400.1_P VEKAAA------------------F--EMQDIQ-------NELEKWTEER-----------------NAIAEVNQKLIKNQESWRKKVKEAEE-----------------REATSTKAMN
    AK251438.1_HORVU     VDKTIN------------------D--KLQELQ-------LKFENTMLEK-----------------KKVAEMNEKLTKSQDIWRQTVKGIEE-----------------RERAQLKLKD
    Phvul.005G181500.1_P VQKAIS------------------L--KQQKIQ-------SKVDRCKKEK-----------------KFLDDLNENLVKNEDIWKAKILEIEE-----------------RERKATRVME
    orange1.1g011525m_CI VEKAVA------------------S--KMQDIQ-------NELDICEEAK-----------------KAVADVNSKLIKNQEIMRKKFKEIEE-----------------REITSLRLRD
    GSMUA_Achr3P13360_00 VEKAIG------------------L--KLHKLQ-------MKLDKCIEEK-----------------RFFEDINENLMKNQEMWKAKLQQLEE-----------------REQAAMNLRD
    evm_27.model.AmTr_v1 AREAVN------------------L--KLQEMH-------VKLDKCSAEN-----------------RGIADANDKLMKKQEIWKKKLQEIEE-----------------REKMAIKERD
    Pp1s40_296V6.1_PHYPA VDESVS------------------L--KLKKLQ-------VRLEKMEKEN-----------------QDLKELNKCLIENQKIYQQRMQEFEE-----------------RELKSVKERD
    Ca_02909_CICAR       AQKAVS------------------L--KQQKIQ-------SKIDRCNKEK-----------------KFLDELNENLLKNEEIWKAKILEIEE-----------------REKKALRLTN
    Tc00_g032110_THECC   VNKAVM------------------Q--KRQKMQ-------AKLERCVKEK-----------------KFLEDLNENLLKNQEIWKAKLLEVEE-----------------REKKALRMKN
    Cc02_g19690_COFCA    GGQ---------------------S-----------------------------------------------------------------------------------------------
    MDP0000266286_MALDO  VEKAVN------------------S--KMQDLQ-------AKLEKCLEER-----------------NAVADINRSLIKDQETWRRKLKEIDE-----------------REAASLRLRE
    EG4P66601_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Solyc07g008050.2.1_S VEKAVF------------------S--KLNDLQ-------AKIEMYTEET-----------------KSIAERNQVLLKNQELLQTKYRETAE-----------------RERLLLKSKD
    Cucsa.132280.1_CUCSA VEEALI------------------S--KTQDIQ-------DKLEKCVKET-----------------NTVSEVNQKLVKNQEMWLAKAKQIEE-----------------RELASLKSRN
    Pp1s14_283V6.1_PHYPA ------------------------------------------------------------------------------------------------------------------------
    EG4P15130_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    orange1.1g018432m_CI ----------------------------------------------------------------------PDVKTPT-------------------------------------------
    Ostta4_35565_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Os02g09060.1_ORYSA   TEKAVG------------------I--KVQKLQ-------AKLDKCMEET-----------------GFLNDIHENLVKNMEMWRERIQKVKE-----------------REQAAIRLKD
    PGSC0003DMP400053855 VEKAVF------------------S--KLNDLQ-------AKIEMYTEET-----------------KSIVERNQVLLKNQELLQTKYRETAE-----------------RERLLLKSKD
    27446.m000481_RICCO  VKKAVA------------------Q--RLQKLQ-------SKLDRCLKEK-----------------KFLDELDENLVKNQEIWKAKVLEIEE-----------------REKTALKMKD
    Potri.009G090100.1_P S-----------------------------------------------------------------------------------------------------------------------
    PDK_30s766901g002_PH VEKAAS------------------L--KLQKLL-------SKLDKCIEEK-----------------KFLDDINENLIKNQEMWKAKIVQIEE-----------------R---------
    29927.m000605_RICCO  VEKAVT------------------S--TMQDIQ-------NKLERCEMEK-----------------DAVTDVNRNLIKNQDIWRKKVKEVEE-----------------REMSSLRSRD
    AT2G42160.1_ARATH    VEQIVV------------------N--TMQELQ-------NKIEKCEEEK-----------------SGITEVNTKLIKEQDTWRKKAKEIEE-----------------REAALLGSKD
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    MA_494524g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    MA_79946g0010_PICAB  ------------------------M-----------------------------------------------------------------------------------------------
    Millet_GLEAN_1001547 G-----------------------A-----------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando VEKAVS------------------L--KLQDIQ-------LKIGNVTREK-----------------KALADINENLMKNQNIWHEKIKEVEE-----------------RERTTLKIKD
    GSMUA_Achr3P30140_00 ------------------------S-----------------------------------------------------------------------------------------------
    orange1.1g019425m_CI VEKAVA------------------S--KMQDIQ-------NELDICEEAK-----------------KAVADVNSKLIKNQEIMRKKFKEIEE-----------------REITSLRLRD
    Glyma15g00770.2_GLYM VQKAIS------------------L--KQQKIQ-------SKIDRCKKEK-----------------KFLDDLNENLVKNEDIWKTKILAIEE-----------------REKKTTRLMG
    orange1.1g014500m_CI VEKAVA------------------S--KMQDIQ-------NELDICEEAK-----------------KAVADVNPLTTHFRSVILFFF--------------------------------
    Sb06g030620.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    PDK_30s709101g009_PH VEKTVN------------------S--KLQDIQ-------LKLENVIREK-----------------KVVAETNENLMKNQNLWREKVKEIEE-----------------RERATLKLKD
    GRMZM5G896756_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    Os12g32374.1_ORYSA   Q-----------------------S-----------------------------------------------------------------------------------------------
    cassava4.1_018065m_M K-----------------------N-----------------------------------------------------------------------------------------------
    Bradi3g06180.1_BRADI TAKAVS------------------I--KLQKLQ-------AKLDKCIEEK-----------------SFLDDINTNLVKNQEMWIERIRKVQE-----------------REQAALRLKD
    PGSC0003DMP400009626 SG----------------------K-----------------------------------------------------------------------------------------------
    Solyc10g049650.1.1_S SG----------------------N-----------------------------------------------------------------------------------------------
    Glyma07g14551.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g014488m_CI VEKAVA------------------S--KMQDIQ-------NELDICEEAK-----------------KAVADVNPLTTHFRSVILFFF--------------------------------
    Bradi4g06630.1_BRADI G-----------------------S-----------------------------------------------------------------------------------------------
    C.cajan_01900_CAJCA  VEKAAA------------------S--EMQDIQ-------NELEKSTEER-----------------NAIAEVNQKLIKNQEVWRKKVKEAEE-----------------REATSIKLVN
    GSVIVT01037858001_VI G-----------------------N-----------------------------------------------------------------------------------------------
    PGSC0003DMP400009872 VEKALC------------------QNPRLMKLK-------VRLDKYVEEK-----------------KFHDDINDNLTRNKEIWEAKILEIEE-----------------REKKAQKMKD
    C.cajan_21844_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    ITC1587_Bchr3_P06352 VEKAIG------------------L--KLHKLQ-------MKLNKCIEEK-----------------RFFEDINENLMKNQEMWQAKLQHLEE-----------------REQAAMKLRD
    Glyma01g45400.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Bradi5g23970.1_BRADI VDKAVN------------------D--KLQEMQ-------LKLENLALEK-----------------KKVAEMNEKLTKSQDIWRQTVKGIEE-----------------RERAQLKLKD
    chr1.CM0088.530.r2.d ------------------------------------------------------------------------------------------------------------------------
    Sb08g016307.1_SORBI  S-----------------------------------------------------------------------------------------------------------------------
    Os04g55480.1_ORYSA   VDKAVN------------------D--KSKEIQ-------QKIENAMLEK-----------------KKLADMNEKLTKNQDIWRRTLKEIEE-----------------RERAQLKLKD
    EG4P66602_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1002888 --------------------------------------------------------------------------------------------------------------REKAALKQKD
    supercontig_106.73_C GTG---------------------R-----------------------------------------------------------------------------------------------
    cassava4.1_006523m_M VDKAVT------------------S--TMQDIQ-------TKLEKCEQEK-----------------DAVAEINRSLIKNQEIWRKKVKEVEE-----------------RETAALRSRD
    Medtr4g114970.1_MEDT VEKAAT------------------S--GMLDIQ-------NELEKCTEER-----------------NVVAEVNRKLIKNSEMWRKKIKEAEE-----------------REAASMKSMN
    orange1.1g023654m_CI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g032009m_CI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomP VEKAVS------------------L--KLQDIQ-------LKIGNVMREK-----------------KALSDINENLMKNQNIWHEKIKEVEE-----------------RERTTLKIKD
    Cc06_g08180_COFCA    VEKTLF------------------S--RMHDLQ-------YRLERYTEEK-----------------KAISERNQELMKKQELLQQKYKDIEA-----------------MSSLTLKSKD
    MDP0000279102_MALDO  VEKAVN------------------S--KMQDLQ-------AKLEKCLEER-----------------NAVADINRSLIKDQETWRRKLKEIDE-----------------REAASLRLRE
    selmo_227454_SELMO   IERQAS------------------A--RLHKLQ-------LRLDKAEKEK-----------------NFLTQLNQCLADNQKKWENKCHDLEE-----------------RGSATLKLKD
    Cucsa.105760.1_CUCSA TEKTIN------------------Q--KLQKMQ-------AKLDKCIKEK-----------------KFLDDLNENLLKNQEIWKTKIREMEE-----------------REKKSVEAKD
    MLOC_18786.1_HORVU   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.800.r2.a --------------------------------------------------------------------------------------------------------------REVTSMKSFN
    MDP0000191872_MALDO  VEKAVP------------------L----KKLQ-------AKLDRCVKEK-----------------KFLDDLNENLLKNQEIWKAKILESEE-----------------RERKTLKLRD
    evm_27.model.AmTr_v1 VEKSTS---------------------KLQKIQ-------SKIDKCAEEK-----------------KFLTDIHDNLVKNQGMWMVELQDAEQ-----------------REKAALRLRD
    ITC1587_BchrUn_rando ------------------------------------------------------------------------------------------------------------------------
    LjSGA_019478.1_LOTJA ------------------------------------------------------------------------------------------------------------------------
    Ostta4_38022_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Cc11_g03280_COFCA    VEQAIS------------------QNPKLLKLQ-------AKLDKLVEEK-----------------KFLDDINDNLLKNLEIWEGKIAEIEE-----------------RDKKDLNLKD
    AT2G14830.2_ARATH    ------------------------L-----------------------------------------------------------------------------------------------
    Glyma17g12120.1_GLYM VEKAAA------------------S--EMLDIQ-------NELEKCTEER-----------------NAIAEVNQKLIKNQEIWRKKVKEAEG-----------------REATSIKLKN
    Potri.018G128100.1_P VENAVT------------------S--TMQDIQ-------NKLEKCELEK-----------------NAVADINRGLIKNQEIWRKKVKELED-----------------RGTSSLSSRD
    MDP0000335452_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Medtr6g012470.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1003072 VEKALS------------------I--KIQKLE-------AKIEKCMEEK-----------------RFLDEVHENLVRNQEKWIETIRKAQA-----------------REQAALRLKD
    Cre10.g454400.t1.3_C ADKAAAEAEAAHAAAREEARRRGAAERKAAETT-------EALRAVRQEA-----------------EFLRSLNETLLANQRDFKSQLAEQRG-----------------RADAA----E
    AT2G26000.2_ARATH    ASKAIS------------------Q--RLQKLQ-------TRFDRCVKEK-----------------QFLEDLNENLVKNKDVWSTKITEMKE-----------------REKKAVRAKD
    MDP0000255931_MALDO  VEKAVN------------------S--KMQDLQ-------AKLEKCLEER-----------------NAVADINRSLIKDQETWRRKLKEIDE-----------------REAASLRLRE

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                               1810      1820      1830      1840      1850      1860      1870      1880      1890      1900      1910      1920
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    Glyma13g22710.1_GLYM ERIIDLEEQ------------------------------------------IRDIKIFLE-AQKTID-KM---SDSNG-IKEGTVLP-VAYEQS------------------SPGHSKR-
    MA_10428609g0020_PIC ------------------------------------------------------------------------------------------------------------------------
    supercontig_46.26_CA EQILDLEEQ------------------------------------------LRDLTVYIE-AQKTVH-KM---TDSDG-IKGGTILP-VPPKEP------------------SASATRR-
    Glyma09g17743.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g015431m_CI DKIQDSEAQ------------------------------------------LRDLMAYLE-AEKTLQ-QL---SIS-NEIKDGTVLP-MSVESS------------------TSTGTKG-
    MDP0000210436_MALDO  ------------------------------------------------------------------------------------------------------------------------
    MA_508435g0010_PICAB EKIADLEEQ------------------------------------------VRDFMVYIE-AQKTLE-NC---SDS-ADIRDGTILL-QPESTS--------------------KTSRR-
    Medtr2g104600.1_MEDT DRVTDLEKQ------------------------------------------LSNLMVCLE-GGKTEE-HP---PL--SNANDGTVSV-ISKVSS--------------------VKL---
    Potri.005G110500.1_P DKIQDLEEQ------------------------------------------LRDLMMSLE-AGKKVEQQL---SIP-NELKDGTVLP-ISVESS------------------SGKGPKG-
    Millet_GLEAN_1001828 ETIRDLEEQ------------------------------------------IKDFKFSIK-LQKSIE-KN-------DGVKGGTLVP-LHMESD------------------SGGKGKR-
    C.cajan_29736_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    MA_2413g0010_PICAB   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006182m_M DKIHELEEQ------------------------------------------LRDLMVYLE-AGRTME-QV---SIS-NEIKDGTVLP-ISVESS------------------SGAKTKG-
    Ostta4_34845_OSTTA   ARIKELEDE------------------------------------------NRDLMLFLD-TSRKLH-----VGGEVDEIAGGTIVG-VDPDAP------------------AKSSTPAR
    Tc02_g010060_THECC   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.790.r2.a ERKLDLEEQ------------------------------------------IRDIKIFLE-AQKTID-KM---SDSNG-IKDGTVLP-VAYEQS------------------SSGNSKK-
    MDP0000313787_MALDO  EKIVDLEEQ------------------------------------------IRDFTVYIQ-AQKTLN-DM---RDSDS-IKGGTVLP-VPSKQS------------------SPANSRR-
    MA_28767g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    supercontig_10.127_C EKIQDLEEK------------------------------------------LRELMLHLE-DTETVE-QI---PVV-NEIEDDTHLQ--GIGSS------------------STTMQRE-
    28152.m000902_RICCO  ------------------------------------------------------------------------------------------------------------------------
    C.cajan_02948_CAJCA  DRVVDLEKQ------------------------------------------LRDLMVCLE-GGKMEE-QL---PVT-DEIKEGTVFD-KPKESS------------------STTN----
    GRMZM2G066169_P03_ZE EMILDLEEQ------------------------------------------IKDFKFSIK-LQKSIE-KN-------DGVKGGTLVP-LPTVSD------------------SGGKGKR-
    MA_85047g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Gorai.009G125800.1_G DKIQALEDQ------------------------------------------LRELMAQLEAAGKAVE-QS---SVS-NENER--------------------------------------
    MDP0000304270_MALDO  ----------------------------------------------------------------------------------------------------------------------P-
    Phvul.002G052300.1_P ------------------------------------------------------------------------------------------------------------------------
    selmo_89370_SELMO    ------------------------------------------------------------------------------------------------------------------------
    Sb04g005670.1_SORBI  EKIEKLQEE------------------------------------------LRGLIAHFE-CQSAIA-QAQD-SFS-SDIPGDMILP-VASESS------------------SSGGD---
    GSVIVT01015569001_VI EKILDLEEQ------------------------------------------IRDLTVYIE-AQKTLH-HM---TDSND-IKGGTLLP-VPSNQS------------------SSTNTKR-
    orange1.1g015426m_CI DKIQDSEAQ------------------------------------------LRDLMAYLE-AEKTLQ-QL---SIS-NEIKDGTVLP-MSVESS------------------TSTGTKG-
    selmo_403400_SELMO   NKIQDLEEQ------------------------------------------VRDFMVFIE-AQRTIS-KH-------SEMQQGNVLV-----------------------GDSSSEKRK-
    Ca_06690_CICAR       ERILDLEEQ------------------------------------------IRDIRIFLE-AQKTIE-KM---SDSNG-IKEGTVLPMMAHEQS------------------SPAKSKR-
    Gorai.001G043700.1_G EKILDLEEQ------------------------------------------VRDLKVYIE-AQKTLT-DM---TDSDS-IKGGTVLP-VPSTQS------------------SSTNTRR-
    GSVIVT01029385001_VI ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01013625001_VI DKIQELEEQ------------------------------------------LGDLMMLIE-TGKA-------------------------------------------------------
    orange1.1g016340m_CI ATILDLEEQ------------------------------------------IRDLTVYIE-AQKTLT-NM---TDSDG-IKGGTVLP-VSYQQS------------------SPTNTRR-
    Solyc03g120000.2.1_S EEISELEEQ------------------------------------------IATLMESID-T----------------------------------------------------------
    Medtr5g005150.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Potri.007G063900.1_P DKIQDLEEQ------------------------------------------LRDLMVSLE-AGNTVE-QL---CIS-NELKDEAFLP-ILVESS------------------SGKSPKG-
    Gorai.005G232800.1_G ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G005205_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G041561_P01_ZE EKIEKLQEE------------------------------------------LRGLIAHFD-CQSDTA-QASN-AIS-SDIPGGMILP-VASESS------------------SSGG----
    cassava4.1_008621m_M ERIIDLEEQ------------------------------------------IRDLTVYIE-AQKTLN-NM---TDTSD-IQGGTLLP-VPSKGS------------------SPANNKR-
    cassava4.1_033258m_M -------------------------------------------------------------QAKVLS-----------------------------------------------------
    CMK309C_CYAME        ---DELAEQ------------------------------------------VNDLLQHIE-ASAKLS-AR---GNNSTSIRLEALRN-RRITKP--------------------------
    MDP0000335450_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Phvul.003G167400.1_P ERVIDLEEQ------------------------------------------IRDIKIFLQ-AQKTID-KM---SDSNG-IKDGTVLP-VAYEQS------------------SPSPSKR-
    AK251438.1_HORVU     DMILDLEEQ------------------------------------------IKDFRYSIK-LQKSMA-KS---SHADD-LKGGMLVP-LAMESD------------------S-GKGKR-
    Phvul.005G181500.1_P DRVADLEKQ------------------------------------------LGDLMVCLE-GGKMEG-EL---PVSDDEIKEGTVFQ-KSKESS------------------SVSTSQA-
    orange1.1g011525m_CI ATILDLEEQ------------------------------------------IRDLTVYIE-AQKTLT-NM---TDSDG-IKGGTVLP-VSYQQS------------------SPTNTRR-
    GSMUA_Achr3P13360_00 EKIQGLEEQ------------------------------------------LGYLIRHIE-TQKVID-EPPDGSVA-SEIKGGTIIP-VQSASS------------------SSGSNKQ-
    evm_27.model.AmTr_v1 EKIMDLEEQ------------------------------------------VRDFMVYIE-AQKTLD-NL---PNTDD-VKGGTLLP-VSVQSP-------------------STNTKH-
    Pp1s40_296V6.1_PHYPA DKIADLEEQ------------------------------------------VRDFMLFIE-AQKLLE-----TSGNGGELRDGSVLA-LPVNLG------------------PSKSSSR-
    Ca_02909_CICAR       GKIMALEKQ------------------------------------------LSDLMVCLE-GGETVE-QL---PTLSNNTNGGTIPN-ISKGSS------------------STCSS---
    Tc00_g032110_THECC   DKIQALDEQ------------------------------------------LRDLMAHLE-AGKAVE-QL---SIS-DEINDTTVLP-KALESS------------------SRKEEKD-
    Cc02_g19690_COFCA    ------------------------------------------------------------------------------------------------------------------------
    MDP0000266286_MALDO  EKIVDLEEQ------------------------------------------IRDLTVYIR-AQKTLD-DM---KGSDS-IKGGTVLP-VPSKQS------------------SPANSRR-
    EG4P66601_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Solyc07g008050.2.1_S ENKLDLKEQ------------------------------------------IRDLKVYVE-AQKKLS-NM---GISDG--KGGTVLS-VEPNKQ------------------SSSNSRR-
    Cucsa.132280.1_CUCSA EKIHDLEEQ------------------------------------------IRDLTVYIE-AQKTLN-NI---TDSDD-IKGGTLLP-VPAKES------------------SPGNGRK-
    Pp1s14_283V6.1_PHYPA ------------------------------------------------------------------------------------------------------------------------
    EG4P15130_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    orange1.1g018432m_CI ------------------------------------------------------------------------------------------------------------------------
    Ostta4_35565_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Os02g09060.1_ORYSA   EKIEKLEEE------------------------------------------LRDLIAHFE-RQNTVA-EASE-SMS-SDINGSTILS-VPSESS------------------ASSNSS--
    PGSC0003DMP400053855 ENKLDLKEQ------------------------------------------IRDLKVYVE-AQRKLS-NM---GISDG--KGGTVLS-VEPNKQ------------------SSSNSRR-
    27446.m000481_RICCO  DKIQDLEEQ------------------------------------------LKDLMVYLE-AGKPME-QV---SVS-DEIKDGTVLP-LLVESS------------------SRTNSPR-
    Potri.009G090100.1_P ------------------------------------------------------------------------------------------------------------------------
    PDK_30s766901g002_PH ------------------------------------------------------------------------------------------------------------------------
    29927.m000605_RICCO  ERILDLEEQ------------------------------------------IRDLTIYIE-AQKTLN-KM---TDTND-IQGGTLLP-VPSKQS------------------SPANNRR-
    AT2G42160.1_ARATH    EMITDLQEQ------------------------------------------IRDITVFIE-AKKTLK-KM--SSDTDG-IREGTVLP-VPISPE------------------PVSSVRR-
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    MA_494524g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    MA_79946g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1001547 ------------------------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando DKIRDLEDE------------------------------------------IRDFMVFIE-AQKTLN------AVDTDNIQGVSEKK-NAIEEK-------------NYKDLMPARDGN-
    GSMUA_Achr3P30140_00 ------------------------------------------------------------------------------------------------------------------------
    orange1.1g019425m_CI ATILDLEEQ------------------------------------------IRDLTVYIE-AQKTLT-NM---TDSDG-IKGGTVLP-VSYQQS------------------SPTNTRR-
    Glyma15g00770.2_GLYM DRVADLEMQ------------------------------------------LGDLMVCLE-GGRTVE-QL---AAS-DEIKEGIILD-KSIESS------------------TTSGSDL-
    orange1.1g014500m_CI -----------------------------------------------------------------------------G-GVGGCYLM-LLIE----------------------------
    Sb06g030620.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    PDK_30s709101g009_PH ERIRDLVEE------------------------------------------IRDFTVSIE-AQKALD-DM---VGADD-IRGGTVLP-VSSPQP------------------SSTRNKR-
    GRMZM5G896756_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    Os12g32374.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_018065m_M ------------------------------------------------------------------------------------------------------------------------
    Bradi3g06180.1_BRADI EKIEKLEAE------------------------------------------LTDLIAHIE-CHNAVA-AAPE-SIA-SEIQGGSVLP-GPSAAS------------------SSSISGG-
    PGSC0003DMP400009626 ------------------------------------------------------------------------------------------------------------------------
    Solyc10g049650.1.1_S ------------------------------------------------------------------------------------------------------------------------
    Glyma07g14551.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g014488m_CI -----------------------------------------------------------------------------G-GVGGCYLM-LLIE----------------------------
    Bradi4g06630.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    C.cajan_01900_CAJCA  EKIIDLEEQ------------------------------------------IRDIKIFLQ-AQKTID-KM---SDSNG-IKEGKVLP-VAYEQS------------------SPGHSKR-
    GSVIVT01037858001_VI ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400009872 EEISELEEQ------------------------------------------IATLMESIE-T----------------------------------------------------------
    C.cajan_21844_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    ITC1587_Bchr3_P06352 EKIQGLEEQGTQEQLFRVKLKENPLRKKKRGGGGQRARDDEVWRLVGRSERLGYLIRHIE-TQKVID-DPPDGSVA-SEIKGGTIIP-VQSASS------------------SSGSNKQ-
    Glyma01g45400.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Bradi5g23970.1_BRADI DTIIDLEEQ------------------------------------------IKDFKYNIK-LQKSIQ-KN---AHADD-LQGGMLVP-LAMESD------------------S-GKGKR-
    chr1.CM0088.530.r2.d ------------------------------------------------------------------------------------------------------------------------
    Sb08g016307.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    Os04g55480.1_ORYSA   DTIRDLEEQ------------------------------------------IKDFKFSIK-LQKSIE-KN---KNADD-LKGGLLVP-LPMVPD------------------SGTKDRPY
    EG4P66602_ELAGV      --------------------------------------------------------VCIE-AQKALD-NM---DGADD-IRGGTVLP-VPSTQP------------------SSTRNKR-
    Millet_GLEAN_1002888 AEIVLLEEH------------------------------------------VRDMKAALAAKAEGKI-----------------------------------------------------
    supercontig_106.73_C ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006523m_M ERIIDLEEQ------------------------------------------IRDLTVYIE-AQKTLN-NM---TDTSD-IQGGTLLP-VPSKGS------------------SPANNKR-
    Medtr4g114970.1_MEDT EKILDLEEQ------------------------------------------IRDITIFLQ-AQKTID-KM---SDSNG-IKEGTVLP-VAHEQP------------------SPGNSKK-
    orange1.1g023654m_CI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g032009m_CI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomP DKIRDLEDE------------------------------------------IRDFMVFIE-AQKTLN-AV---D-TDN-IQGGTLLP-VPLPQS------------------TSAKTKK-
    Cc06_g08180_COFCA    EMVLDLKEQ------------------------------------------IRDLKVYLE-AQKKIA-KM---TDREG-VKGGTLLP-VEATCP------------------SSGNPKR-
    MDP0000279102_MALDO  EKIVDLEEQ------------------------------------------IRDLTVYIR-AQKTLD-DM---KGSDS-IKGGTVLP-VPSKQS------------------SPANSRR-
    selmo_227454_SELMO   QRIAELEEQ------------------------------------------MQSLIKQL-------------------------------------------------------------
    Cucsa.105760.1_CUCSA YKIQDLEAQ------------------------------------------LGELMALLE-TGQQME-QL---SVT-GEAREASILP-ISPEPS------------------SKNNGKG-
    MLOC_18786.1_HORVU   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.800.r2.a ERTLDLEEQ------------------------------------------IRDIKIFLE-AQNTID-KM---SDSNG-NQGWNSFTFTSGL----------------------------
    MDP0000191872_MALDO  DKISDLEEQ------------------------------------------LGNLMMYLE-AGKTVE-QL---STS-DEIKDGTALP-VSVEPPQPSVRNEIGDATVTSPEVSNECIEE-
    evm_27.model.AmTr_v1 EKIKNLEEQ------------------------------------------LRDLMVYIE-SQKTLD-QLPD-----SNVQEGTVSP-VAESSS--------------------RNTKT-
    ITC1587_BchrUn_rando ------------------------------------------------------------------------------------------------------------------------
    LjSGA_019478.1_LOTJA ---------------------------------------------------IGNCISFVIC-----------------------------------------------------------
    Ostta4_38022_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Cc11_g03280_COFCA    KRIKDLQEE------------------------------------------LSSLITSLE-IGNAAE-PS---PTS-NHV----------------------------------------
    AT2G14830.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    Glyma17g12120.1_GLYM ERINDLEEQ------------------------------------------IRDIKIFLE-AQKTID-KM---SDSNG-IKEGTVLP-VAYEQS------------------SPGHSKR-
    Potri.018G128100.1_P ERIHDLEEQ------------------------------------------IRDLTVYIE-AQKTLH-TM---TDTDDGIKGGTLLP-VPPKQS------------------SPANSRK-
    MDP0000335452_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Medtr6g012470.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1003072 EKIEKLNEE------------------------------------------TRDLIAHLE-CQYAIA-QAPD-SIS-GDIQGGTILP-VASSTS------------------SSNSDSS-
    Cre10.g454400.t1.3_C AAVKELQEQ------------------------------------------VRDLAFFIE-AQRTINEAA---GAGASELREGTVLP-LPEKQG------------------GRSSGRG-
    AT2G26000.2_ARATH    EKIQGLEEQ------------------------------------------LGNLMAQMD-GESEVS-ET-------KEVQDATVST-TNTSSS------------------GAGNVIH-
    MDP0000255931_MALDO  EKIVDLEEQ------------------------------------------IRDLTVYIR-AQKTLD-DM---KGSDS-IKGGTVLP-VPSKQS------------------SPANSRR-

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                               1930      1940      1950      1960      1970      1980      1990      2000      2010      2020      2030      2040
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    Glyma13g22710.1_GLYM --------NKKSGRRR---------------------------------------------------------N----------------------------------------------
    MA_10428609g0020_PIC ------------------------------------------------------------------------------------------------------------------------
    supercontig_46.26_CA --------QKKSGRRR---------------------------------------------------------N----------------------------------------------
    Glyma09g17743.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g015431m_CI --------KGK----------------------------------------------------------------------KI--Q----------------------------------
    MDP0000210436_MALDO  ------------------------------------------------------------------------------------------------------------------------
    MA_508435g0010_PICAB --------PGKSSRKK---------------------------------------------------------R----------------------------------------------
    Medtr2g104600.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Potri.005G110500.1_P --------RKKAN------------------------------------------------------------------NPRE--S----------------------------------
    Millet_GLEAN_1001828 --------SSRTSKRR---------------------------------------------------------N----------------------------------------------
    C.cajan_29736_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    MA_2413g0010_PICAB   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006182m_M --------ARKAN------------------------------------------------------------------NRRK--S----------------------------------
    Ostta4_34845_OSTTA   NPTHERLRSKLEDRKR--------------------------------------------------------------------------------------------------------
    Tc02_g010060_THECC   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.790.r2.a --------NRKSGRRR---------------------------------------------------------N----------------------------------------------
    MDP0000313787_MALDO  --------QSKSGRRR---------------------------------------------------------N----------------------------------------------
    MA_28767g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    supercontig_10.127_C --------EKKQNWQL---------------------------------------------------------LIIFGKSRLQLSA----------------------------------
    28152.m000902_RICCO  ------------------------------------------------------------------------------------------------------------------------
    C.cajan_02948_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G066169_P03_ZE --------SSRTSKRR---------------------------------------------------------N----------------------------------------------
    MA_85047g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Gorai.009G125800.1_G ------------------------------------------------------------------------------------------------------------------------
    MDP0000304270_MALDO  --------SSTLL-----------------------------------------------------------------------------------------------------------
    Phvul.002G052300.1_P ------------------------------------------------------------------------------------------------------------------------
    selmo_89370_SELMO    ------------------------------------------------------------------------------------------------------------------------
    Sb04g005670.1_SORBI  ---------PVGG------------------------------------------------------------------TRNGKQN----------------------------------
    GSVIVT01015569001_VI --------HSKSNRRR---------------------------------------------------------H----------------------------------------------
    orange1.1g015426m_CI --------KGK----------------------------------------------------------------------KI--Q----------------------------------
    selmo_403400_SELMO   --------VARNRRKR--------------------------------------------------------------------------------------------------------
    Ca_06690_CICAR       --------NKKSGRRR---------------------------------------------------------P----------------------------------------------
    Gorai.001G043700.1_G --------HKKAGRRR---------------------------------------------------------N----------------------------------------------
    GSVIVT01029385001_VI ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01013625001_VI ---------GA--------------------------------------------------------------------ATSH--Q----------------------------------
    orange1.1g016340m_CI --------HKKSSRRK---------------------------------------------------------N----------------------------------------------
    Solyc03g120000.2.1_S ------------------------------------------------------------------------------------------------------------------------
    Medtr5g005150.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Potri.007G063900.1_P --------GKKAN------------------------------------------------------------------NQRK--S----------------------------------
    Gorai.005G232800.1_G ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G005205_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G041561_P01_ZE ---------VVGG------------------------------------------------------------------TGNGEQN----------------------------------
    cassava4.1_008621m_M --------HTKPGRRR---------------------------------------------------------T----------------------------------------------
    cassava4.1_033258m_M ------------------------------------------------------------------------------------------------------------------------
    CMK309C_CYAME        ------------------------------------------------------------------------------------------------------------------------
    MDP0000335450_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Phvul.003G167400.1_P --------NRKSGRRR---------------------------------------------------------N----------------------------------------------
    AK251438.1_HORVU     --------SSRTSKRR---------------------------------------------------------N----------------------------------------------
    Phvul.005G181500.1_P --------CITE-------------------------------------------------------------------------E----------------------------------
    orange1.1g011525m_CI --------HKKSSRRK---------------------------------------------------------N----------------------------------------------
    GSMUA_Achr3P13360_00 --------GRR--------------------------------------------------------------------NRRR--N----------------------------------
    evm_27.model.AmTr_v1 --------TTKTNRRR---------------------------------------------------------R----------------------------------------------
    Pp1s40_296V6.1_PHYPA --------ISRQGKKK---------------------------------------------------------R----------------------------------------------
    Ca_02909_CICAR       ------------------------------------------------------------------------------------------------------------------------
    Tc00_g032110_THECC   --------SKNETSS---------------------------------------------------------------------------------------------------------
    Cc02_g19690_COFCA    ------------------------------------------------------------------------------------------------------------------------
    MDP0000266286_MALDO  --------QTKSGRRR---------------------------------------------------------N----------------------------------------------
    EG4P66601_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Solyc07g008050.2.1_S --------RGKLGRRR---------------------------------------------------------N----------------------------------------------
    Cucsa.132280.1_CUCSA ---------KKGNRRR---------------------------------------------------------S----------------------------------------------
    Pp1s14_283V6.1_PHYPA ------------------------------------------------------------------------------------------------------------------------
    EG4P15130_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    orange1.1g018432m_CI ------------------------------------------------------------------------------------------------------------------------
    Ostta4_35565_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Os02g09060.1_ORYSA   -----------------------------------------------------------------------------------IRN----------------------------------
    PGSC0003DMP400053855 --------RGKLGRRR---------------------------------------------------------N----------------------------------------------
    27446.m000481_RICCO  --------SKKAN------------------------------------------------------------------NRRKIRG----------------------------------
    Potri.009G090100.1_P ------------------------------------------------------------------------------------------------------------------------
    PDK_30s766901g002_PH ------------------------------------------------------------------------------------------------------------------------
    29927.m000605_RICCO  --------HSKPGRRR---------------------------------------------------------N----------------------------------------------
    AT2G42160.1_ARATH    --------QKKSNRRK--------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    MA_494524g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    MA_79946g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1001547 ------------------------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando --------EEKERRDR---------------------------------------------------------RVVPEASKHGDQKMEQEVLVVEQFVADEPLKPRIPRQRLAVVEYRRH
    GSMUA_Achr3P30140_00 ------------------------------------------------------------------------------------------------------------------------
    orange1.1g019425m_CI --------HKKSSRRK---------------------------------------------------------N----------------------------------------------
    Glyma15g00770.2_GLYM --------VGRD-------------------------------------------------------------------------A----------------------------------
    orange1.1g014500m_CI ---------------T---------------------------------------------------------F----------------------------------------------
    Sb06g030620.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    PDK_30s709101g009_PH --------SSKLNRRR---------------------------------------------------------N----------------------------------------------
    GRMZM5G896756_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    Os12g32374.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_018065m_M ------------------------------------------------------------------------------------------------------------------------
    Bradi3g06180.1_BRADI --------SPIRA------------------------------------------------------------------TRSRKRN----------------------------------
    PGSC0003DMP400009626 ------------------------------------------------------------------------------------------------------------------------
    Solyc10g049650.1.1_S ------------------------------------------------------------------------------------------------------------------------
    Glyma07g14551.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g014488m_CI ---------------T---------------------------------------------------------F----------------------------------------------
    Bradi4g06630.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    C.cajan_01900_CAJCA  --------NRKSGRRR---------------------------------------------------------N----------------------------------------------
    GSVIVT01037858001_VI ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400009872 ------------------------------------------------------------------------------------------------------------------------
    C.cajan_21844_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    ITC1587_Bchr3_P06352 --------GRR--------------------------------------------------------------------NRRR--N----------------------------------
    Glyma01g45400.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Bradi5g23970.1_BRADI --------SSRTSRRR---------------------------------------------------------N----------------------------------------------
    chr1.CM0088.530.r2.d ------------------------------------------------------------------------------------------------------------------------
    Sb08g016307.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    Os04g55480.1_ORYSA   EWQNENATLAQNANTN---------------------------------------------------------EAALTM-----------------------------------------
    EG4P66602_ELAGV      --------SSKLSRRR---------------------------------------------------------N----------------------------------------------
    Millet_GLEAN_1002888 ------------------------------------------------------------------------------------------------------------------------
    supercontig_106.73_C ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006523m_M --------HTKPGRRR---------------------------------------------------------T----------------------------------------------
    Medtr4g114970.1_MEDT --------NRKSGRKRRRCRRHGVRSNRVDDGEDDGGCYDEGEDDGGGERMAEGGRKREGAQREDEVEGVVGGR----------------------------------------------
    orange1.1g023654m_CI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g032009m_CI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomP --------SSKINRKR---------------------------------------------------------N----------------------------------------------
    Cc06_g08180_COFCA    --------RAKSGRRRG-------------------------------------------------------------------------------------------------------
    MDP0000279102_MALDO  --------QTKSGRRR---------------------------------------------------------N----------------------------------------------
    selmo_227454_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Cucsa.105760.1_CUCSA --------SSKSN------------------------------------------------------------------NKKK--S----------------------------------
    MLOC_18786.1_HORVU   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.800.r2.a ------------------------------------------------------------------------------------------------------------------------
    MDP0000191872_MALDO  --------GSKTN------------------------------------------------------------------NRRRRRQETVFEEPSLLVSVLFEWLPCQSGCLDELLAFSFQ
    evm_27.model.AmTr_v1 --------TPRKNKKRN-------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando ---------------R---------------------------------------------------------A----------------------------------------------
    LjSGA_019478.1_LOTJA ------------------------------------------------------------------------------------------------------------------------
    Ostta4_38022_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Cc11_g03280_COFCA    ------------------------------------------------------------------------------------------------------------------------
    AT2G14830.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    Glyma17g12120.1_GLYM --------NKKSGRRR---------------------------------------------------------N----------------------------------------------
    Potri.018G128100.1_P --------HTKLGRKR---------------------------------------------------------N----------------------------------------------
    MDP0000335452_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Medtr6g012470.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1003072 --------SPIPG------------------------------------------------------------------TMK-MGS----------------------------------
    Cre10.g454400.t1.3_C --------GGGGGSSR---------------------------------------------------------SGKPGGGGGGGGSGSGASASRGGGTSK--------------------
    AT2G26000.2_ARATH    ------ANKKKSNRRK---------------------------------------------------------G----------------------------------------------
    MDP0000255931_MALDO  --------QTKSGRRR---------------------------------------------------------N----------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                               2050      2060      2070      2080      2090      2100      2110      2120      2130      2140      2150      2160
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    Glyma13g22710.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    MA_10428609g0020_PIC ------------------------------------------------------------------------------------------------------------------------
    supercontig_46.26_CA ------------------------------------------------------------------------------------------------------------------------
    Glyma09g17743.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g015431m_CI ------------------------------------------------------------------------------------------------------------------------
    MDP0000210436_MALDO  ------------------------------------------------------------------------------------------------------------------------
    MA_508435g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    Medtr2g104600.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Potri.005G110500.1_P ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1001828 ------------------------------------------------------------------------------------------------------------------------
    C.cajan_29736_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    MA_2413g0010_PICAB   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006182m_M ------------------------------------------------------------------------------------------------------------------------
    Ostta4_34845_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Tc02_g010060_THECC   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.790.r2.a ------------------------------------------------------------------------------------------------------------------------
    MDP0000313787_MALDO  ------------------------------------------------------------------------------------------------------------------------
    MA_28767g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    supercontig_10.127_C ------------------------------------------------------------------------------------------------------------------------
    28152.m000902_RICCO  ------------------------------------------------------------------------------------------------------------------------
    C.cajan_02948_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G066169_P03_ZE ------------------------------------------------------------------------------------------------------------------------
    MA_85047g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Gorai.009G125800.1_G ------------------------------------------------------------------------------------------------------------------------
    MDP0000304270_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Phvul.002G052300.1_P ------------------------------------------------------------------------------------------------------------------------
    selmo_89370_SELMO    ------------------------------------------------------------------------------------------------------------------------
    Sb04g005670.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01015569001_VI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g015426m_CI ------------------------------------------------------------------------------------------------------------------------
    selmo_403400_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Ca_06690_CICAR       ------------------------------------------------------------------------------------------------------------------------
    Gorai.001G043700.1_G ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01029385001_VI ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01013625001_VI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g016340m_CI ------------------------------------------------------------------------------------------------------------------------
    Solyc03g120000.2.1_S ------------------------------------------------------------------------------------------------------------------------
    Medtr5g005150.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Potri.007G063900.1_P ------------------------------------------------------------------------------------------------------------------------
    Gorai.005G232800.1_G ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G005205_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G041561_P01_ZE ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_008621m_M ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_033258m_M ------------------------------------------------------------------------------------------------------------------------
    CMK309C_CYAME        ------------------------------------------------------------------------------------------------------------------------
    MDP0000335450_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Phvul.003G167400.1_P ------------------------------------------------------------------------------------------------------------------------
    AK251438.1_HORVU     ------------------------------------------------------------------------------------------------------------------------
    Phvul.005G181500.1_P ------------------------------------------------------------------------------------------------------------------------
    orange1.1g011525m_CI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P13360_00 ------------------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    Pp1s40_296V6.1_PHYPA ------------------------------------------------------------------------------------------------------------------------
    Ca_02909_CICAR       ------------------------------------------------------------------------------------------------------------------------
    Tc00_g032110_THECC   ------------------------------------------------------------------------------------------------------------------------
    Cc02_g19690_COFCA    ------------------------------------------------------------------------------------------------------------------------
    MDP0000266286_MALDO  ------------------------------------------------------------------------------------------------------------------------
    EG4P66601_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Solyc07g008050.2.1_S ------------------------------------------------------------------------------------------------------------------------
    Cucsa.132280.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    Pp1s14_283V6.1_PHYPA ------------------------------------------------------------------------------------------------------------------------
    EG4P15130_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    orange1.1g018432m_CI ------------------------------------------------------------------------------------------------------------------------
    Ostta4_35565_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Os02g09060.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400053855 ------------------------------------------------------------------------------------------------------------------------
    27446.m000481_RICCO  ------------------------------------------------------------------------------------------------------------------------
    Potri.009G090100.1_P ------------------------------------------------------------------------------------------------------------------------
    PDK_30s766901g002_PH ------------------------------------------------------------------------------------------------------------------------
    29927.m000605_RICCO  ------------------------------------------------------------------------------------------------------------------------
    AT2G42160.1_ARATH    ------------------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    MA_494524g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    MA_79946g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1001547 ------------------------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando RLRRTANKQPQQPHQRLHKKRCQKLHAPNHTT----------------------------------------------------------------------------------------
    GSMUA_Achr3P30140_00 ------------------------------------------------------------------------------------------------------------------------
    orange1.1g019425m_CI ------------------------------------------------------------------------------------------------------------------------
    Glyma15g00770.2_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g014500m_CI ------------------------------------------------------------------------------------------------------------------------
    Sb06g030620.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    PDK_30s709101g009_PH ------------------------------------------------------------------------------------------------------------------------
    GRMZM5G896756_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    Os12g32374.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_018065m_M ------------------------------------------------------------------------------------------------------------------------
    Bradi3g06180.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400009626 ------------------------------------------------------------------------------------------------------------------------
    Solyc10g049650.1.1_S ------------------------------------------------------------------------------------------------------------------------
    Glyma07g14551.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g014488m_CI ------------------------------------------------------------------------------------------------------------------------
    Bradi4g06630.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    C.cajan_01900_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01037858001_VI ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400009872 ------------------------------------------------------------------------------------------------------------------------
    C.cajan_21844_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    ITC1587_Bchr3_P06352 ------------------------------------------------------------------------------------------------------------------------
    Glyma01g45400.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Bradi5g23970.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    chr1.CM0088.530.r2.d ------------------------------------------------------------------------------------------------------------------------
    Sb08g016307.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    Os04g55480.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    EG4P66602_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1002888 ------------------------------------------------------------------------------------------------------------------------
    supercontig_106.73_C ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006523m_M ------------------------------------------------------------------------------------------------------------------------
    Medtr4g114970.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    orange1.1g023654m_CI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g032009m_CI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomP ------------------------------------------------------------------------------------------------------------------------
    Cc06_g08180_COFCA    ------------------------------------------------------------------------------------------------------------------------
    MDP0000279102_MALDO  ------------------------------------------------------------------------------------------------------------------------
    selmo_227454_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Cucsa.105760.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    MLOC_18786.1_HORVU   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.800.r2.a ------------------------------------------------------------------------------------------------------------------------
    MDP0000191872_MALDO  FIKKRESAHLLWEILSRIKKTTDRNSVSLACKRLHGLDNEQRQSLRVGCGLDPANEALTSLCSRFANLTRVEITYAGWMSKLGKQLDDQGLLILSNYCPSLVDLTLSYCTFITDVGIRHL
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando ------------------------------------------------------------------------------------------------------------------------
    LjSGA_019478.1_LOTJA ------------------------------------------------------------------------------------------------------------------------
    Ostta4_38022_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Cc11_g03280_COFCA    ------------------------------------------------------------------------------------------------------------------------
    AT2G14830.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    Glyma17g12120.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Potri.018G128100.1_P ------------------------------------------------------------------------------------------------------------------------
    MDP0000335452_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Medtr6g012470.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1003072 ------------------------------------------------------------------------------------------------------------------------
    Cre10.g454400.t1.3_C ------------------------------------------------------------------------------------------------------------------------
    AT2G26000.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    MDP0000255931_MALDO  ------------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                               2170      2180      2190      2200      2210      2220      2230      2240      2250      2260      2270      2280
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    Glyma13g22710.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    MA_10428609g0020_PIC ------------------------------------------------------------------------------------------------------------------------
    supercontig_46.26_CA ------------------------------------------------------------------------------------------------------------------------
    Glyma09g17743.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g015431m_CI ------------------------------------------------------------------------------------------------------------------------
    MDP0000210436_MALDO  ------------------------------------------------------------------------------------------------------------------------
    MA_508435g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    Medtr2g104600.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Potri.005G110500.1_P ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1001828 ------------------------------------------------------------------------------------------------------------------------
    C.cajan_29736_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    MA_2413g0010_PICAB   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006182m_M ------------------------------------------------------------------------------------------------------------------------
    Ostta4_34845_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Tc02_g010060_THECC   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.790.r2.a ------------------------------------------------------------------------------------------------------------------------
    MDP0000313787_MALDO  ------------------------------------------------------------------------------------------------------------------------
    MA_28767g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    supercontig_10.127_C ------------------------------------------------------------------------------------------------------------------------
    28152.m000902_RICCO  ------------------------------------------------------------------------------------------------------------------------
    C.cajan_02948_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G066169_P03_ZE ------------------------------------------------------------------------------------------------------------------------
    MA_85047g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Gorai.009G125800.1_G ------------------------------------------------------------------------------------------------------------------------
    MDP0000304270_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Phvul.002G052300.1_P ------------------------------------------------------------------------------------------------------------------------
    selmo_89370_SELMO    ------------------------------------------------------------------------------------------------------------------------
    Sb04g005670.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01015569001_VI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g015426m_CI ------------------------------------------------------------------------------------------------------------------------
    selmo_403400_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Ca_06690_CICAR       ------------------------------------------------------------------------------------------------------------------------
    Gorai.001G043700.1_G ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01029385001_VI ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01013625001_VI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g016340m_CI ------------------------------------------------------------------------------------------------------------------------
    Solyc03g120000.2.1_S ------------------------------------------------------------------------------------------------------------------------
    Medtr5g005150.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Potri.007G063900.1_P ------------------------------------------------------------------------------------------------------------------------
    Gorai.005G232800.1_G ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G005205_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G041561_P01_ZE ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_008621m_M ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_033258m_M ------------------------------------------------------------------------------------------------------------------------
    CMK309C_CYAME        ------------------------------------------------------------------------------------------------------------------------
    MDP0000335450_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Phvul.003G167400.1_P ------------------------------------------------------------------------------------------------------------------------
    AK251438.1_HORVU     ------------------------------------------------------------------------------------------------------------------------
    Phvul.005G181500.1_P ------------------------------------------------------------------------------------------------------------------------
    orange1.1g011525m_CI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P13360_00 ------------------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    Pp1s40_296V6.1_PHYPA ------------------------------------------------------------------------------------------------------------------------
    Ca_02909_CICAR       ------------------------------------------------------------------------------------------------------------------------
    Tc00_g032110_THECC   ------------------------------------------------------------------------------------------------------------------------
    Cc02_g19690_COFCA    ------------------------------------------------------------------------------------------------------------------------
    MDP0000266286_MALDO  ------------------------------------------------------------------------------------------------------------------------
    EG4P66601_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Solyc07g008050.2.1_S ------------------------------------------------------------------------------------------------------------------------
    Cucsa.132280.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    Pp1s14_283V6.1_PHYPA ------------------------------------------------------------------------------------------------------------------------
    EG4P15130_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    orange1.1g018432m_CI ------------------------------------------------------------------------------------------------------------------------
    Ostta4_35565_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Os02g09060.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400053855 ------------------------------------------------------------------------------------------------------------------------
    27446.m000481_RICCO  ------------------------------------------------------------------------------------------------------------------------
    Potri.009G090100.1_P ------------------------------------------------------------------------------------------------------------------------
    PDK_30s766901g002_PH ------------------------------------------------------------------------------------------------------------------------
    29927.m000605_RICCO  ------------------------------------------------------------------------------------------------------------------------
    AT2G42160.1_ARATH    ------------------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    MA_494524g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    MA_79946g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1001547 ------------------------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P30140_00 ------------------------------------------------------------------------------------------------------------------------
    orange1.1g019425m_CI ------------------------------------------------------------------------------------------------------------------------
    Glyma15g00770.2_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g014500m_CI ------------------------------------------------------------------------------------------------------------------------
    Sb06g030620.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    PDK_30s709101g009_PH ------------------------------------------------------------------------------------------------------------------------
    GRMZM5G896756_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    Os12g32374.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_018065m_M ------------------------------------------------------------------------------------------------------------------------
    Bradi3g06180.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400009626 ------------------------------------------------------------------------------------------------------------------------
    Solyc10g049650.1.1_S ------------------------------------------------------------------------------------------------------------------------
    Glyma07g14551.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g014488m_CI ------------------------------------------------------------------------------------------------------------------------
    Bradi4g06630.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    C.cajan_01900_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01037858001_VI ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400009872 ------------------------------------------------------------------------------------------------------------------------
    C.cajan_21844_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    ITC1587_Bchr3_P06352 ------------------------------------------------------------------------------------------------------------------------
    Glyma01g45400.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Bradi5g23970.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    chr1.CM0088.530.r2.d ------------------------------------------------------------------------------------------------------------------------
    Sb08g016307.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    Os04g55480.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    EG4P66602_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1002888 ------------------------------------------------------------------------------------------------------------------------
    supercontig_106.73_C ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006523m_M ------------------------------------------------------------------------------------------------------------------------
    Medtr4g114970.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    orange1.1g023654m_CI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g032009m_CI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomP ------------------------------------------------------------------------------------------------------------------------
    Cc06_g08180_COFCA    ------------------------------------------------------------------------------------------------------------------------
    MDP0000279102_MALDO  ------------------------------------------------------------------------------------------------------------------------
    selmo_227454_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Cucsa.105760.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    MLOC_18786.1_HORVU   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.800.r2.a ------------------------------------------------------------------------------------------------------------------------
    MDP0000191872_MALDO  SSCSKLSALKLNFNARITGCGILSVVVGCKNLTTLHLIRCLNISSFEWLEYLGKLETLEDLSIKNCRAIGEGDLIKLGSSWKKLKCLQFEVDVNYRYMKVYDRLAVDRWQKQWVPCDNMV
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando ------------------------------------------------------------------------------------------------------------------------
    LjSGA_019478.1_LOTJA ------------------------------------------------------------------------------------------------------------------------
    Ostta4_38022_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Cc11_g03280_COFCA    ------------------------------------------------------------------------------------------------------------------------
    AT2G14830.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    Glyma17g12120.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Potri.018G128100.1_P ------------------------------------------------------------------------------------------------------------------------
    MDP0000335452_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Medtr6g012470.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1003072 ------------------------------------------------------------------------------------------------------------------------
    Cre10.g454400.t1.3_C ------------------------------------------------------------------------------------------------------------------------
    AT2G26000.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    MDP0000255931_MALDO  ------------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                               2290      2300      2310      2320      2330      2340      2350      2360      2370      2380      2390      2400
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    Glyma13g22710.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    MA_10428609g0020_PIC ------------------------------------------------------------------------------------------------------------------------
    supercontig_46.26_CA ------------------------------------------------------------------------------------------------------------------------
    Glyma09g17743.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g015431m_CI ------------------------------------------------------------------------------------------------------------------------
    MDP0000210436_MALDO  ------------------------------------------------------------------------------------------------------------------------
    MA_508435g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    Medtr2g104600.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Potri.005G110500.1_P ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1001828 ------------------------------------------------------------------------------------------------------------------------
    C.cajan_29736_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    MA_2413g0010_PICAB   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006182m_M ------------------------------------------------------------------------------------------------------------------------
    Ostta4_34845_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Tc02_g010060_THECC   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.790.r2.a ------------------------------------------------------------------------------------------------------------------------
    MDP0000313787_MALDO  ------------------------------------------------------------------------------------------------------------------------
    MA_28767g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    supercontig_10.127_C ------------------------------------------------------------------------------------------------------------------------
    28152.m000902_RICCO  ------------------------------------------------------------------------------------------------------------------------
    C.cajan_02948_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G066169_P03_ZE ------------------------------------------------------------------------------------------------------------------------
    MA_85047g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Gorai.009G125800.1_G ------------------------------------------------------------------------------------------------------------------------
    MDP0000304270_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Phvul.002G052300.1_P ------------------------------------------------------------------------------------------------------------------------
    selmo_89370_SELMO    ------------------------------------------------------------------------------------------------------------------------
    Sb04g005670.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01015569001_VI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g015426m_CI ------------------------------------------------------------------------------------------------------------------------
    selmo_403400_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Ca_06690_CICAR       ------------------------------------------------------------------------------------------------------------------------
    Gorai.001G043700.1_G ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01029385001_VI ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01013625001_VI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g016340m_CI ------------------------------------------------------------------------------------------------------------------------
    Solyc03g120000.2.1_S ------------------------------------------------------------------------------------------------------------------------
    Medtr5g005150.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Potri.007G063900.1_P ------------------------------------------------------------------------------------------------------------------------
    Gorai.005G232800.1_G ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G005205_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G041561_P01_ZE ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_008621m_M ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_033258m_M ------------------------------------------------------------------------------------------------------------------------
    CMK309C_CYAME        ------------------------------------------------------------------------------------------------------------------------
    MDP0000335450_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Phvul.003G167400.1_P ------------------------------------------------------------------------------------------------------------------------
    AK251438.1_HORVU     ------------------------------------------------------------------------------------------------------------------------
    Phvul.005G181500.1_P ------------------------------------------------------------------------------------------------------------------------
    orange1.1g011525m_CI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P13360_00 ------------------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    Pp1s40_296V6.1_PHYPA ------------------------------------------------------------------------------------------------------------------------
    Ca_02909_CICAR       ------------------------------------------------------------------------------------------------------------------------
    Tc00_g032110_THECC   ------------------------------------------------------------------------------------------------------------------------
    Cc02_g19690_COFCA    ------------------------------------------------------------------------------------------------------------------------
    MDP0000266286_MALDO  ------------------------------------------------------------------------------------------------------------------------
    EG4P66601_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Solyc07g008050.2.1_S ------------------------------------------------------------------------------------------------------------------------
    Cucsa.132280.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    Pp1s14_283V6.1_PHYPA ------------------------------------------------------------------------------------------------------------------------
    EG4P15130_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    orange1.1g018432m_CI ------------------------------------------------------------------------------------------------------------------------
    Ostta4_35565_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Os02g09060.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400053855 ------------------------------------------------------------------------------------------------------------------------
    27446.m000481_RICCO  ------------------------------------------------------------------------------------------------------------------------
    Potri.009G090100.1_P ------------------------------------------------------------------------------------------------------------------------
    PDK_30s766901g002_PH ------------------------------------------------------------------------------------------------------------------------
    29927.m000605_RICCO  ------------------------------------------------------------------------------------------------------------------------
    AT2G42160.1_ARATH    ------------------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    MA_494524g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    MA_79946g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1001547 ------------------------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P30140_00 ------------------------------------------------------------------------------------------------------------------------
    orange1.1g019425m_CI ------------------------------------------------------------------------------------------------------------------------
    Glyma15g00770.2_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g014500m_CI ------------------------------------------------------------------------------------------------------------------------
    Sb06g030620.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    PDK_30s709101g009_PH ------------------------------------------------------------------------------------------------------------------------
    GRMZM5G896756_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    Os12g32374.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_018065m_M ------------------------------------------------------------------------------------------------------------------------
    Bradi3g06180.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400009626 ------------------------------------------------------------------------------------------------------------------------
    Solyc10g049650.1.1_S ------------------------------------------------------------------------------------------------------------------------
    Glyma07g14551.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    orange1.1g014488m_CI ------------------------------------------------------------------------------------------------------------------------
    Bradi4g06630.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    C.cajan_01900_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01037858001_VI ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400009872 ------------------------------------------------------------------------------------------------------------------------
    C.cajan_21844_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    ITC1587_Bchr3_P06352 ------------------------------------------------------------------------------------------------------------------------
    Glyma01g45400.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Bradi5g23970.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    chr1.CM0088.530.r2.d ------------------------------------------------------------------------------------------------------------------------
    Sb08g016307.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    Os04g55480.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    EG4P66602_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1002888 ------------------------------------------------------------------------------------------------------------------------
    supercontig_106.73_C ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_006523m_M ------------------------------------------------------------------------------------------------------------------------
    Medtr4g114970.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    orange1.1g023654m_CI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g032009m_CI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomP ------------------------------------------------------------------------------------------------------------------------
    Cc06_g08180_COFCA    ------------------------------------------------------------------------------------------------------------------------
    MDP0000279102_MALDO  ------------------------------------------------------------------------------------------------------------------------
    selmo_227454_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Cucsa.105760.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    MLOC_18786.1_HORVU   ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0003.800.r2.a ------------------------------------------------------------------------------------------------------------------------
    MDP0000191872_MALDO  ELSLVNCIISPGRGLACVLGKCKNLEKIHLDMCVGVRDCDIIGLAQKSKNLRSIFLRVPSDFSLPLLMNNPLRLTDECLKAVAQNCSMLESVRISYSDGEFPSFSSFTLDGILNLIQKCP
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando ------------------------------------------------------------------------------------------------------------------------
    LjSGA_019478.1_LOTJA ------------------------------------------------------------------------------------------------------------------------
    Ostta4_38022_OSTTA   ------------------------------------------------------------------------------------------------------------------------
    Cc11_g03280_COFCA    ------------------------------------------------------------------------------------------------------------------------
    AT2G14830.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    Glyma17g12120.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Potri.018G128100.1_P ------------------------------------------------------------------------------------------------------------------------
    MDP0000335452_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Medtr6g012470.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1003072 ------------------------------------------------------------------------------------------------------------------------
    Cre10.g454400.t1.3_C ------------------------------------------------------------------------------------------------------------------------
    AT2G26000.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    MDP0000255931_MALDO  ------------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                               2410      2420      2430      2440      2450      2460      2470      2480      2490      2500
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========
    Glyma13g22710.1_GLYM -------------------------------------------------------------------------------------------------------------
    MA_10428609g0020_PIC -------------------------------------------------------------------------------------------------------------
    supercontig_46.26_CA -------------------------------------------------------------------------------------------------------------
    Glyma09g17743.1_GLYM -------------------------------------------------------------------------------------------------------------
    orange1.1g015431m_CI -------------------------------------------------------------------------------------------------------------
    MDP0000210436_MALDO  -------------------------------------------------------------------------------------------------------------
    MA_508435g0010_PICAB -------------------------------------------------------------------------------------------------------------
    Medtr2g104600.1_MEDT -------------------------------------------------------------------------------------------------------------
    Potri.005G110500.1_P -------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1001828 -------------------------------------------------------------------------------------------------------------
    C.cajan_29736_CAJCA  -------------------------------------------------------------------------------------------------------------
    MA_2413g0010_PICAB   -------------------------------------------------------------------------------------------------------------
    cassava4.1_006182m_M -------------------------------------------------------------------------------------------------------------
    Ostta4_34845_OSTTA   -------------------------------------------------------------------------------------------------------------
    Tc02_g010060_THECC   -------------------------------------------------------------------------------------------------------------
    chr4.CM0003.790.r2.a -------------------------------------------------------------------------------------------------------------
    MDP0000313787_MALDO  -------------------------------------------------------------------------------------------------------------
    MA_28767g0010_PICAB  -------------------------------------------------------------------------------------------------------------
    supercontig_10.127_C -------------------------------------------------------------------------------------------------------------
    28152.m000902_RICCO  -------------------------------------------------------------------------------------------------------------
    C.cajan_02948_CAJCA  -------------------------------------------------------------------------------------------------------------
    GRMZM2G066169_P03_ZE -------------------------------------------------------------------------------------------------------------
    MA_85047g0010_PICAB  -------------------------------------------------------------------------------------------------------------
    Gorai.009G125800.1_G -------------------------------------------------------------------------------------------------------------
    MDP0000304270_MALDO  -------------------------------------------------------------------------------------------------------------
    Phvul.002G052300.1_P -------------------------------------------------------------------------------------------------------------
    selmo_89370_SELMO    -------------------------------------------------------------------------------------------------------------
    Sb04g005670.1_SORBI  -------------------------------------------------------------------------------------------------------------
    GSVIVT01015569001_VI -------------------------------------------------------------------------------------------------------------
    orange1.1g015426m_CI -------------------------------------------------------------------------------------------------------------
    selmo_403400_SELMO   -------------------------------------------------------------------------------------------------------------
    Ca_06690_CICAR       -------------------------------------------------------------------------------------------------------------
    Gorai.001G043700.1_G -------------------------------------------------------------------------------------------------------------
    GSVIVT01029385001_VI -------------------------------------------------------------------------------------------------------------
    GSVIVT01013625001_VI -------------------------------------------------------------------------------------------------------------
    orange1.1g016340m_CI -------------------------------------------------------------------------------------------------------------
    Solyc03g120000.2.1_S -------------------------------------------------------------------------------------------------------------
    Medtr5g005150.1_MEDT -------------------------------------------------------------------------------------------------------------
    Potri.007G063900.1_P -------------------------------------------------------------------------------------------------------------
    Gorai.005G232800.1_G -------------------------------------------------------------------------------------------------------------
    GRMZM2G005205_P02_ZE -------------------------------------------------------------------------------------------------------------
    GRMZM2G041561_P01_ZE -------------------------------------------------------------------------------------------------------------
    cassava4.1_008621m_M -------------------------------------------------------------------------------------------------------------
    cassava4.1_033258m_M -------------------------------------------------------------------------------------------------------------
    CMK309C_CYAME        -------------------------------------------------------------------------------------------------------------
    MDP0000335450_MALDO  -------------------------------------------------------------------------------------------------------------
    Phvul.003G167400.1_P -------------------------------------------------------------------------------------------------------------
    AK251438.1_HORVU     -------------------------------------------------------------------------------------------------------------
    Phvul.005G181500.1_P -------------------------------------------------------------------------------------------------------------
    orange1.1g011525m_CI -------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P13360_00 -------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 -------------------------------------------------------------------------------------------------------------
    Pp1s40_296V6.1_PHYPA -------------------------------------------------------------------------------------------------------------
    Ca_02909_CICAR       -------------------------------------------------------------------------------------------------------------
    Tc00_g032110_THECC   -------------------------------------------------------------------------------------------------------------
    Cc02_g19690_COFCA    -------------------------------------------------------------------------------------------------------------
    MDP0000266286_MALDO  -------------------------------------------------------------------------------------------------------------
    EG4P66601_ELAGV      -------------------------------------------------------------------------------------------------------------
    Solyc07g008050.2.1_S -------------------------------------------------------------------------------------------------------------
    Cucsa.132280.1_CUCSA -------------------------------------------------------------------------------------------------------------
    Pp1s14_283V6.1_PHYPA -------------------------------------------------------------------------------------------------------------
    EG4P15130_ELAGV      -------------------------------------------------------------------------------------------------------------
    orange1.1g018432m_CI -------------------------------------------------------------------------------------------------------------
    Ostta4_35565_OSTTA   -------------------------------------------------------------------------------------------------------------
    Os02g09060.1_ORYSA   -------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400053855 -------------------------------------------------------------------------------------------------------------
    27446.m000481_RICCO  -------------------------------------------------------------------------------------------------------------
    Potri.009G090100.1_P -------------------------------------------------------------------------------------------------------------
    PDK_30s766901g002_PH -------------------------------------------------------------------------------------------------------------
    29927.m000605_RICCO  -------------------------------------------------------------------------------------------------------------
    AT2G42160.1_ARATH    -------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 -------------------------------------------------------------------------------------------------------------
    MA_494524g0010_PICAB -------------------------------------------------------------------------------------------------------------
    MA_79946g0010_PICAB  -------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1001547 -------------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando -------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P30140_00 -------------------------------------------------------------------------------------------------------------
    orange1.1g019425m_CI -------------------------------------------------------------------------------------------------------------
    Glyma15g00770.2_GLYM -------------------------------------------------------------------------------------------------------------
    orange1.1g014500m_CI -------------------------------------------------------------------------------------------------------------
    Sb06g030620.1_SORBI  -------------------------------------------------------------------------------------------------------------
    PDK_30s709101g009_PH -------------------------------------------------------------------------------------------------------------
    GRMZM5G896756_P02_ZE -------------------------------------------------------------------------------------------------------------
    Os12g32374.1_ORYSA   -------------------------------------------------------------------------------------------------------------
    cassava4.1_018065m_M -------------------------------------------------------------------------------------------------------------
    Bradi3g06180.1_BRADI -------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400009626 -------------------------------------------------------------------------------------------------------------
    Solyc10g049650.1.1_S -------------------------------------------------------------------------------------------------------------
    Glyma07g14551.1_GLYM -------------------------------------------------------------------------------------------------------------
    orange1.1g014488m_CI -------------------------------------------------------------------------------------------------------------
    Bradi4g06630.1_BRADI -------------------------------------------------------------------------------------------------------------
    C.cajan_01900_CAJCA  -------------------------------------------------------------------------------------------------------------
    GSVIVT01037858001_VI -------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400009872 -------------------------------------------------------------------------------------------------------------
    C.cajan_21844_CAJCA  -------------------------------------------------------------------------------------------------------------
    ITC1587_Bchr3_P06352 -------------------------------------------------------------------------------------------------------------
    Glyma01g45400.1_GLYM -------------------------------------------------------------------------------------------------------------
    Bradi5g23970.1_BRADI -------------------------------------------------------------------------------------------------------------
    chr1.CM0088.530.r2.d -------------------------------------------------------------------------------------------------------------
    Sb08g016307.1_SORBI  -------------------------------------------------------------------------------------------------------------
    Os04g55480.1_ORYSA   -------------------------------------------------------------------------------------------------------------
    EG4P66602_ELAGV      -------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1002888 -------------------------------------------------------------------------------------------------------------
    supercontig_106.73_C -------------------------------------------------------------------------------------------------------------
    cassava4.1_006523m_M -------------------------------------------------------------------------------------------------------------
    Medtr4g114970.1_MEDT -------------------------------------------------------------------------------------------------------------
    orange1.1g023654m_CI -------------------------------------------------------------------------------------------------------------
    orange1.1g032009m_CI -------------------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomP -------------------------------------------------------------------------------------------------------------
    Cc06_g08180_COFCA    -------------------------------------------------------------------------------------------------------------
    MDP0000279102_MALDO  -------------------------------------------------------------------------------------------------------------
    selmo_227454_SELMO   -------------------------------------------------------------------------------------------------------------
    Cucsa.105760.1_CUCSA -------------------------------------------------------------------------------------------------------------
    MLOC_18786.1_HORVU   -------------------------------------------------------------------------------------------------------------
    chr4.CM0003.800.r2.a -------------------------------------------------------------------------------------------------------------
    MDP0000191872_MALDO  VRELAFDQVYSFNDVGMEALCLALHLETLELIRCQEISDEGLQLVGQFPRLSILRLIKCLGVSDDGLKPLAGSYKLELLAVEDCPQISERGVLGAAKSVSFRQDLSWMY
    evm_27.model.AmTr_v1 -------------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando -------------------------------------------------------------------------------------------------------------
    LjSGA_019478.1_LOTJA -------------------------------------------------------------------------------------------------------------
    Ostta4_38022_OSTTA   -------------------------------------------------------------------------------------------------------------
    Cc11_g03280_COFCA    -------------------------------------------------------------------------------------------------------------
    AT2G14830.2_ARATH    -------------------------------------------------------------------------------------------------------------
    Glyma17g12120.1_GLYM -------------------------------------------------------------------------------------------------------------
    Potri.018G128100.1_P -------------------------------------------------------------------------------------------------------------
    MDP0000335452_MALDO  -------------------------------------------------------------------------------------------------------------
    Medtr6g012470.1_MEDT -------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1003072 -------------------------------------------------------------------------------------------------------------
    Cre10.g454400.t1.3_C -------------------------------------------------------------------------------------------------------------
    AT2G26000.2_ARATH    -------------------------------------------------------------------------------------------------------------
    MDP0000255931_MALDO  -------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                    

    Gaps Scores: