Selected Sequences:    47 /Selected Residues:     240
    Deleted Sequences:      0 /Deleted Residues:     1133

    Gaps Scores:           =0=   <.001  <.050  <.100  <.150  <.200  <.250  <.350  <.500  <.750  <1.00   =1=  

                                 10        20        30        40        50        60        70        80        90       100       110       120
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    g14930.t1_CHLRE      ------------------------------------------------------------------------------------------------------------------------
    Glyma17g04750.2_GLYM ------------------------------------------------------------------------------------------------------------------------
    MDP0000256671_MALDO  SGYRWLQIRSIEARDHRMPVVRSISXTLWKCIWQLAVPPQIRHFLWVSLHLGLXTGKALFNRRLSSSPSCPLCLSXDETVEXVFLRCPWVAXVWFGGALNYKVXAXGFVSWSRWLQDVFS
    evm.TU.contig_44700. ------------------------------------------------------------------------------------------------------------------------
    Solyc11g013410.1.1_S ------------------------------------------------------------------------------------------------------------------------
    Medtr4g124260.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    orange1.1g026518m_CI ------------------------------------------------------------------------------------------------------------------------
    Os02g49190.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    supercontig_146.8_CA ------------------------------------------------------------------------------------------------------------------------
    orange1.1g031052m_CI ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01017710001_VI ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1003226 ------------------------------------------------------------------------------------------------------------------------
    Solyc11g013430.1.1_S ------------------------------------------------------------------------------------------------------------------------
    C.cajan_03949_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    PDK_30s65509644g002_ ------------------------------------------------------------------------------------------------------------------------
    orange1.1g025626m_CI ------------------------------------------------------------------------------------------------------------------------
    AT3G17590.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    CMT559C_CYAME        ------------------------------------------------------------------------------------------------------------------------
    29889.m003419_RICCO  ------------------------------------------------------------------------------------------------------------------------
    orange1.1g026309m_CI ------------------------------------------------------------------------------------------------------------------------
    Cc07_g19930_COFCA    ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400048312 ------------------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    Gorai.009G000800.1_G ------------------------------------------------------------------------------------------------------------------------
    Phvul.003G124500.1_P ------------------------------------------------------------------------------------------------------------------------
    Solyc11g013400.1.1_S ------------------------------------------------------------------------------------------------------------------------
    Potri.010G004100.2_P ------------------------------------------------------------------------------------------------------------------------
    chr2.CM0262.290.r2.m ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0432.850.r2.m ------------------------------------------------------------------------------------------------------------------------
    MA_6707682g0010_PICA ------------------------------------------------------------------------------------------------------------------------
    AK248953.1_HORVU     ------------------------------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomP ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_015014m_M ------------------------------------------------------------------------------------------------------------------------
    Bradi2g36760.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    chr2.CM0262.260.r2.m ------------------------------------------------------------------------------------------------------------------------
    selmo_79509_SELMO    ------------------------------------------------------------------------------------------------------------------------
    Gorai.006G157900.1_G ------------------------------------------------------------------------------------------------------------------------
    Glyma13g17760.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomP ------------------------------------------------------------------------------------------------------------------------
    Glyma09g28814.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Ca_03092_CICAR       ------------------------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando ------------------------------------------------------------------------------------------------------------------------
    Cucsa.252100.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    EG4P94492_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Sb09g003070.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    Tc03_g025640_THECC   ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G121510_P01_ZE ------------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                130       140       150       160       170       180       190       200       210       220       230       240
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    g14930.t1_CHLRE      ------------------------------------------------------------------------------------------------------------------------
    Glyma17g04750.2_GLYM ------------------------------------------------------------------------------------------------------------------------
    MDP0000256671_MALDO  LSWGSSADRQWLQAYVSFSCWFIWKXRCDFVFNQVPVNPSKVIFSLXSAFGNFLLAVSSVGCARPVLDSREEVXGRSSRMGFAGVVARQVGGRFRAAVRSSVMAXSSLVAEXFXILXGCE
    evm.TU.contig_44700. ------------------------------------------------------------------------------------------------------------------------
    Solyc11g013410.1.1_S ------------------------------------------------------------------------------------------------------------------------
    Medtr4g124260.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    orange1.1g026518m_CI ------------------------------------------------------------------------------------------------------------------------
    Os02g49190.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    supercontig_146.8_CA ------------------------------------------------------------------------------------------------------------------------
    orange1.1g031052m_CI ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01017710001_VI ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1003226 ------------------------------------------------------------------------------------------------------------------------
    Solyc11g013430.1.1_S ------------------------------------------------------------------------------------------------------------------------
    C.cajan_03949_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    PDK_30s65509644g002_ ------------------------------------------------------------------------------------------------------------------------
    orange1.1g025626m_CI ------------------------------------------------------------------------------------------------------------------------
    AT3G17590.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    CMT559C_CYAME        ------------------------------------------------------------------------------------------------------------------------
    29889.m003419_RICCO  ------------------------------------------------------------------------------------------------------------------------
    orange1.1g026309m_CI ------------------------------------------------------------------------------------------------------------------------
    Cc07_g19930_COFCA    ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400048312 ------------------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    Gorai.009G000800.1_G ------------------------------------------------------------------------------------------------------------------------
    Phvul.003G124500.1_P ------------------------------------------------------------------------------------------------------------------------
    Solyc11g013400.1.1_S ------------------------------------------------------------------------------------------------------------------------
    Potri.010G004100.2_P ------------------------------------------------------------------------------------------------------------------------
    chr2.CM0262.290.r2.m ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0432.850.r2.m ------------------------------------------------------------------------------------------------------------------------
    MA_6707682g0010_PICA ------------------------------------------------------------------------------------------------------------------------
    AK248953.1_HORVU     ------------------------------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomP ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_015014m_M ------------------------------------------------------------------------------------------------------------------------
    Bradi2g36760.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    chr2.CM0262.260.r2.m ------------------------------------------------------------------------------------------------------------------------
    selmo_79509_SELMO    ------------------------------------------------------------------------------------------------------------------------
    Gorai.006G157900.1_G ------------------------------------------------------------------------------------------------------------------------
    Glyma13g17760.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomP ------------------------------------------------------------------------------------------------------------------------
    Glyma09g28814.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Ca_03092_CICAR       ------------------------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando ------------------------------------------------------------------------------------------------------------------------
    Cucsa.252100.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    EG4P94492_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Sb09g003070.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    Tc03_g025640_THECC   ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G121510_P01_ZE ------------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                250       260       270       280       290       300       310       320       330       340       350       360
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    g14930.t1_CHLRE      -------------------------------------------------------------------------------------------------------------MTTDDPAPKKG
    Glyma17g04750.2_GLYM -------------------------------------------------------------------------------------------------------------MK---------
    MDP0000256671_MALDO  LGASLGFSSVIIESDSLQAISCLNGSLXNGSWEAFPILARAQRRRRVQTYPQLESPSIKYGRRHLEGYFRQVKTSRRNLRDSSQREESEESGRACQPLRNPEGEREEKAMK---------
    evm.TU.contig_44700. ------------------------------------------------------------------------------------------------------------------------
    Solyc11g013410.1.1_S -------------------------------------------------------------------------------------------------------------MK---------
    Medtr4g124260.1_MEDT -------------------------------------------------------------------------------------------------------------MK---------
    orange1.1g026518m_CI -------------------------------------------------------------------------------------------------------------MK---------
    Os02g49190.1_ORYSA   -------------------------------------------------------------------------------------------------------------MK---------
    supercontig_146.8_CA -------------------------------------------------------------------------------------------------------------MI---------
    orange1.1g031052m_CI -------------------------------------------------------------------------------------------------------------MK---------
    GSVIVT01017710001_VI -------------------------------------------------------------------------------------------------------------MK---------
    Millet_GLEAN_1003226 -------------------------------------------------------------------------------------------------------------MK---------
    Solyc11g013430.1.1_S -------------------------------------------------------------------------------------------------------------MG---------
    C.cajan_03949_CAJCA  -------------------------------------------------------------------------------------------------------------MK---------
    PDK_30s65509644g002_ -------------------------------------------------------------------------------------------------------------MQ---------
    orange1.1g025626m_CI -------------------------------------------------------------------------------------------------------------MK---------
    AT3G17590.2_ARATH    -------------------------------------------------------------------------------------------------------------MK---------
    CMT559C_CYAME        -------------------------------------------------------------------------------------------------------------MVQS-------
    29889.m003419_RICCO  -------------------------------------------------------------------------------------------------------------MK---------
    orange1.1g026309m_CI -------------------------------------------------------------------------------------------------------------MK---------
    Cc07_g19930_COFCA    -------------------------------------------------------------------------------------------------------------MK---------
    PGSC0003DMP400048312 ------------------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 -------------------------------------------------------------------------------------------------------------MR---------
    Gorai.009G000800.1_G -------------------------------------------------------------------------------------------------------------MK---------
    Phvul.003G124500.1_P -------------------------------------------------------------------------------------------------------------MK---------
    Solyc11g013400.1.1_S ------------------------------------------------------------------------------------------------------------------------
    Potri.010G004100.2_P -------------------------------------------------------------------------------------------------------------MK---------
    chr2.CM0262.290.r2.m -------------------------------------------------------------------------------------------------------------MK---------
    chr4.CM0432.850.r2.m ------------------------------------------------------------------------------------------------------------------------
    MA_6707682g0010_PICA ------------------------------------------------------------------------------------------------------------------------
    AK248953.1_HORVU     -------------------------------------------------------------------------------------------------------------MK---------
    GSMUA_AchrUn_randomP ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_015014m_M -------------------------------------------------------------------------------------------------------------MK---------
    Bradi2g36760.1_BRADI -------------------------------------------------------------------------------------------------------------MK---------
    chr2.CM0262.260.r2.m -------------------------------------------------------------------------------------------------------------MK---------
    selmo_79509_SELMO    ------------------------------------------------------------------------------------------------------------------------
    Gorai.006G157900.1_G -------------------------------------------------------------------------------------------------------------MK---------
    Glyma13g17760.1_GLYM -------------------------------------------------------------------------------------------------------------MK---------
    GSMUA_AchrUn_randomP -------------------------------------------------------------------------------------------------------------MC---------
    Glyma09g28814.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Ca_03092_CICAR       -------------------------------------------------------------------------------------------------------------MK---------
    ITC1587_BchrUn_rando -------------------------------------------------------------------------------------------------------------MGANLQDIEDE
    Cucsa.252100.1_CUCSA -------------------------------------------------------------------------------------------------------------MK---------
    EG4P94492_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Sb09g003070.1_SORBI  -------------------------------------------------------------------------------------------------------------MK---------
    Tc03_g025640_THECC   -------------------------------------------------------------------------------------------------------------MK---------
    GRMZM2G121510_P01_ZE -------------------------------------------------------------------------------------------------------------MK---------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                370       380       390       400       410       420       430       440       450       460       470       480
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    g14930.t1_CHLRE      AVGQGPACRDVGQLRQEVLEAIGAGDHPEKRQKGSLLVPIRVNVDREDGEDVREHFLWRLG------EPGYEVRPIAVRLAADLQLPQNY------------------------------
    Glyma17g04750.2_GLYM ------------T-TISCF-YRNPVKFRM--PTAENLVPIRLDIEI-EGQRYKDALTWNPS------DPDSEVVVFAKRTAKDLKLPPVF------------------------------
    MDP0000256671_MALDO  ------------G-QLSAS-SRGPVKFRM--PTAQNLVPIRLDLDI-DGQRFKDCFTWNPS------DPDSEIVVFAKRTAKDLKLPPGF------------------------------
    evm.TU.contig_44700. ------------------------------------------------------------------------------------------------------------------------
    Solyc11g013410.1.1_S ------------PPSTSGS-PKNPVKFRL--PTAENLVPIRLDIEI-DGKKFKDAFTWNAS------DPDSEVFAFARRTVKDLKLPTAF------------------------------
    Medtr4g124260.1_MEDT ------------T-PVSAF-YRNPVKFRM--PTSENLVPIRLDIEI-DGHRYKDAFTWNPS------DPDSEVVVFAKRTVRDLKLPPPF------------------------------
    orange1.1g026518m_CI ------------L-PATSS-SKAPVK-----PTADNLVPIRLDIET-EGQRYKDAFTWNPS------DPDSEVVVFAKRTVRDLKLPPQF------------------------------
    Os02g49190.1_ORYSA   ------------TVSLGAA-RPSSVKFRM--PTRDNLVPIRVDVEV-DGQRYRDAFTWNPC------DPDSEIISFAKRTAKDLKLPANF------------------------------
    supercontig_146.8_CA ------------CIFNRG---QYLYEDNR--PTADNLVPIRLDIEI-DGQRFKDAFTWNPS------DPDSEVVVFAKRTVKDLKLPPAF------------------------------
    orange1.1g031052m_CI ------------L-PATSS-SKAPVKFRM--PTADNLVPIRLDIET-EGQRYKDAFTWNPS------DPDSEVVVFAKRTVRDLKLPPQF------------------------------
    GSVIVT01017710001_VI ------------P-LPSTS-SKNPVKFRM--PTADNLVPIRLDIEI-DGHRFKDAFTWNPS------DPDSEVVVFAKRTVKDLKLPPAF------------------------------
    Millet_GLEAN_1003226 ------------TVSLGAS-RPSTVNFRM--PTRDNLVPIRVDIEV-DGQRYRDAFTWNPR------DPDSEIISFAKRTAKDLKLPANF------------------------------
    Solyc11g013430.1.1_S ---------------------------------------KLLDVSF--------------------------------------------------------------------------
    C.cajan_03949_CAJCA  ------------T-PISGL-YRNPVKFRM--PTAENLVPIRLDIEI-EGQRYKDAFTWNPS------DPDSEVVVFAKRTVKDLKLPPAF------------------------------
    PDK_30s65509644g002_ ------------T------------------------------SNL-EGTYYPLFLSLFIS-----IDPDSEVVSFAKRTVKDLKLPPTF------------------------------
    orange1.1g025626m_CI ------------L-PATSS-SKAPVKFRM--PTADNLVPIRLDIET-EGQRYKDAFTWNPS------DPDSEVVVFAKRTVRDLKLPPQF------------------------------
    AT3G17590.2_ARATH    ------------G-LVSTG-WKGPVKFRIYRPTAENLVPIRLDIQF-EGQRYKDAFTWNPS------DPDNEVVIFAKRTVKDLKLPYAF------------------------------
    CMT559C_CYAME        ------------VNLDTGQAEEFELKQGQCGAAQEPLIPIRIDVQW-NDARVVDAFLWNQY------EERLTPETFAPHLLRDLQQPMEL------------------------------
    29889.m003419_RICCO  ------------GLPSTSS-SKLPVKFRM--PTAQNLVPIRLDIEI-DGHRFKDAFTWNPS------DPDSEVVVFAKRTAKDLKLPPAF------------------------------
    orange1.1g026309m_CI ------------L-PATSS-SKAPVKFRM--PTADNLVPIRLDIET-EGQRYKDAFTWNPS------DPDSEVVVFAKRTVRDLKLPPQF------------------------------
    Cc07_g19930_COFCA    ------------PLSTWGS-SRNPVKFRI--PTSDNLLPIRLDIEI-DGQRFRDAFTWNPS------DPDSEVVVFAKRTVKDLKLPPAF------------------------------
    PGSC0003DMP400048312 ------------------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 ------------S--VPTG-AKVPTKFRL--PTSENLIPIRIDIEI-DGQRYKDAFTWNPS------DPDPEVLVFAKRTAREMKLPPTF------------------------------
    Gorai.009G000800.1_G ------------S-PASAS-WKAPLKFRM--PTAENLIPIRLDIEV-DGQRYKDAFTWNPY------DPDSEVVMFAKRTVKDLKLAPGF------------------------------
    Phvul.003G124500.1_P ------------T-PISGF-YRNPVKFRM--PTAENLVPIRLDIEI-EGQRYKDAFTWNPS------DPDSEVVVFAKRTVRDLKLPPAF------------------------------
    Solyc11g013400.1.1_S --------------------------------MAKDLKMLLLGTPM--------------A------NPDSEVVVFAKRTVKDLKLPPAF------------------------------
    Potri.010G004100.2_P ------------A-LPSSS-SKGPVKFRV--PTRENLVPIRLDIEL-EEQRYKDAFTWNPT------DPDSEITIFAKRTVKDLKLPPPF------------------------------
    chr2.CM0262.290.r2.m ------------T-PASVF-YRNPVKFRM--PTAENLVPIRLDIEI-DAKRYKDAFTWNPS------DPDHEVGVFARRTVKDLKLPPPF------------------------------
    chr4.CM0432.850.r2.m ------------------------------------------------------------------------------------------------------------------------
    MA_6707682g0010_PICA -------------------------------------IPIRIDIEI-DRLRLKDTFTWNVN------DPNSEIHLFARRIVKELKYLGTF------------------------------
    AK248953.1_HORVU     ------------TVSLGAP-RSSTVKFRM--PTRDNLVPIRVDIEV-DGQRYRDAFTWNPR------DPDSEVITFAKRTAKELKLPATF------------------------------
    GSMUA_AchrUn_randomP ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_015014m_M ------------F-LPPTS-SKAPVKFRM--PTAENLVPIRLDIEL-DGHRFKDAFTWNPS------DPDSEVVVFAKRTAKDLKLPPAF------------------------------
    Bradi2g36760.1_BRADI ------------TVSLSAPTRSSTVKFRM--PTRDNLVPIRVDVEV-DGQRYRDAFTWNPRGAASVSHPDSEIISFAKRTAKDLKLPASF------------------------------
    chr2.CM0262.260.r2.m ------------T-PASVF-YRNPVKFRM--PTAENLVPIRLDIEI-DAKRYKDAFTWNPS------DPDHEVGVFARRTVKDLKLPPPF------------------------------
    selmo_79509_SELMO    -------------------------------PTAENLIPMRLDIEL-DSHRFKDSFSWNAH------GEDSEIMPFARRLVAEMNLPPVF------------------------------
    Gorai.006G157900.1_G ------------S-PASAS-WKAPLKFRM--PTAENLIPIRLDIEV-DGQSYKDAFTWNPY------DPDSEVVMFAKRTVKDLKLSPGF------------------------------
    Glyma13g17760.1_GLYM ------------T-PISGF-YRNPVKFRM--PTAENLVPIRLDIEI-EGQRYKDAFTWNPS------DPDSEVVVFAKRTVKDLKLPPAF------------------------------
    GSMUA_AchrUn_randomP ---------------------LFLIAVGR--PTAENFVPIRLDLDI-DGQRFKDAFTWNPN------DPDSEVNNFAKRTVKDLKLPPTF------------------------------
    Glyma09g28814.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Ca_03092_CICAR       ------------T-PVSGF-YKNPVKFRM--PTSENLVPLRLDIEI-DGHRYKDAFTWNPS------DPDSEVVVFAKRTVKDLKLPPPF------------------------------
    ITC1587_BchrUn_rando LVFEDDRLIWGDV------------------ARASRYVISKDGIMM-DQSKVEVILNWPTP------ASLHDVRSFHGLTFFYIRFIKGFSSIVAPITKCLKCDKFKWTSEADDVFELLK
    Cucsa.252100.1_CUCSA ------------A-SASPH-SKAPFKFRI--PTAENLVPIRLDIEI-DGQRFKDAFTWNPS------DPDSEVVVFAKRTVKDLKLPPAF------------------------------
    EG4P94492_ELAGV      -----------------------------------MVMASREVVEGWKSGRGALGGVKEMY------NPDSEVVSFAKRTVKDLKLPPTF------------------------------
    Sb09g003070.1_SORBI  ------------TVSLGAS-RPSTVNFRM--PTRDNLVPIRVDVEV-DGQRYRDAFTWNPR------DPDSEIISFAKRTAKDLKLPANF------------------------------
    Tc03_g025640_THECC   ------------A-PASAS-WKAPLKFRM--PTAENLVPIRLDIEV-DGQRYKDAFTWNPN------DPDSEVVMFARRTVKDLKLAPGF------------------------------
    GRMZM2G121510_P01_ZE ------------TVSLGAS-RPSTVNFRM--PTRDNLVPIRVDVEV-DGQRYRDAFTWNPR------DPDSEIISFAKRTAKDLKLPANF------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                490       500       510       520       530       540       550       560       570       580       590       600
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    g14930.t1_CHLRE      ------------------------------------------------------------------------------------------------------------------------
    Glyma17g04750.2_GLYM ------------------------------------------------------------------------------------------------------------------------
    MDP0000256671_MALDO  ------------------------------------------------------------------------------------------------------------------------
    evm.TU.contig_44700. ------------------------------------------------------------------------------------------------------------------------
    Solyc11g013410.1.1_S ------------------------------------------------------------------------------------------------------------------------
    Medtr4g124260.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    orange1.1g026518m_CI ------------------------------------------------------------------------------------------------------------------------
    Os02g49190.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    supercontig_146.8_CA ------------------------------------------------------------------------------------------------------------------------
    orange1.1g031052m_CI ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01017710001_VI ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1003226 ------------------------------------------------------------------------------------------------------------------------
    Solyc11g013430.1.1_S ------------------------------------------------------------------------------------------------------------------------
    C.cajan_03949_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    PDK_30s65509644g002_ ------------------------------------------------------------------------------------------------------------------------
    orange1.1g025626m_CI ------------------------------------------------------------------------------------------------------------------------
    AT3G17590.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    CMT559C_CYAME        ------------------------------------------------------------------------------------------------------------------------
    29889.m003419_RICCO  ------------------------------------------------------------------------------------------------------------------------
    orange1.1g026309m_CI ------------------------------------------------------------------------------------------------------------------------
    Cc07_g19930_COFCA    ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400048312 ------------------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------------------------
    Gorai.009G000800.1_G ------------------------------------------------------------------------------------------------------------------------
    Phvul.003G124500.1_P ------------------------------------------------------------------------------------------------------------------------
    Solyc11g013400.1.1_S ------------------------------------------------------------------------------------------------------------------------
    Potri.010G004100.2_P ------------------------------------------------------------------------------------------------------------------------
    chr2.CM0262.290.r2.m ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0432.850.r2.m ------------------------------------------------------------------------------------------------------------------------
    MA_6707682g0010_PICA ------------------------------------------------------------------------------------------------------------------------
    AK248953.1_HORVU     ------------------------------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomP ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_015014m_M ------------------------------------------------------------------------------------------------------------------------
    Bradi2g36760.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    chr2.CM0262.260.r2.m ------------------------------------------------------------------------------------------------------------------------
    selmo_79509_SELMO    ------------------------------------------------------------------------------------------------------------------------
    Gorai.006G157900.1_G ------------------------------------------------------------------------------------------------------------------------
    Glyma13g17760.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomP ------------------------------------------------------------------------------------------------------------------------
    Glyma09g28814.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Ca_03092_CICAR       ------------------------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando RKVTEAPILVLPNFDKMFEVECDAFNVGIGVVLSQERKPIAFFSEKLNDTRRRYSTYDKEFYAIYRALSHWSQYLFAKPFVLYSDYEALSIGKIPFEVVYGANPTGPLDLVPHSTTKQFS
    Cucsa.252100.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    EG4P94492_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Sb09g003070.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    Tc03_g025640_THECC   ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G121510_P01_ZE ------------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                610       620       630       640       650       660       670       680       690       700       710       720
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    g14930.t1_CHLRE      ------------------------------------------------------------------------------------------------------IRNVEEEMQRSLRPFATF
    Glyma17g04750.2_GLYM ------------------------------------------------------------------------------------------------------VTQIAQSIQ---------
    MDP0000256671_MALDO  ------------------------------------------------------------------------------------------------------ITVIASAIQSQIVEFRSL
    evm.TU.contig_44700. ------------------------------------------------------------------------------------------------------------------------
    Solyc11g013410.1.1_S ------------------------------------------------------------------------------------------------------AFQIAQSIQVIYKKFLEH
    Medtr4g124260.1_MEDT ------------------------------------------------------------------------------------------------------VTQIAQSIQSQLAEFRSY
    orange1.1g026518m_CI ------------------------------------------------------------------------------------------------------ITQIAQSIQTQLTEFRSY
    Os02g49190.1_ORYSA   ------------------------------------------------------------------------------------------------------VPQMLHSIQGQLTEFRSY
    supercontig_146.8_CA ------------------------------------------------------------------------------------------------------VTQIAQSIQV--KDFYS-
    orange1.1g031052m_CI ------------------------------------------------------------------------------------------------------ITQIAQSIQTQLTEFRSY
    GSVIVT01017710001_VI ------------------------------------------------------------------------------------------------------ITQIAQSIQSQLAEFRSF
    Millet_GLEAN_1003226 ------------------------------------------------------------------------------------------------------VPQMLQSIQGQLAEFRSY
    Solyc11g013430.1.1_S -----------------------------------------------------------------------------------------------------------------FSLYLSC
    C.cajan_03949_CAJCA  ------------------------------------------------------------------------------------------------------VTQIAQSIQSQLAEFRSY
    PDK_30s65509644g002_ ------------------------------------------------------------------------------------------------------MTQIAQSIQTQLAEFRSY
    orange1.1g025626m_CI ------------------------------------------------------------------------------------------------------ITQIAQSIQTQLTEFRSY
    AT3G17590.2_ARATH    ------------------------------------------------------------------------------------------------------VTQIAQSIQSQLSDFRAY
    CMT559C_CYAME        ------------------------------------------------------------------------------------------------------ANGVASAIREQIEQYSPF
    29889.m003419_RICCO  ------------------------------------------------------------------------------------------------------VMQIAQSIQTQLSEFRSY
    orange1.1g026309m_CI ------------------------------------------------------------------------------------------------------ITQIAQSIQTQLTEFRSY
    Cc07_g19930_COFCA    ------------------------------------------------------------------------------------------------------ITQIAQSIQSQLTEFRSY
    PGSC0003DMP400048312 ------------------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 ------------------------------------------------------------------------------------------------------ITQIAQSMQSQITEFRSY
    Gorai.009G000800.1_G ------------------------------------------------------------------------------------------------------LPQIVQSIQSQLATFRSY
    Phvul.003G124500.1_P ------------------------------------------------------------------------------------------------------VTQIAQSIQSQLVEFKSY
    Solyc11g013400.1.1_S ------------------------------------------------------------------------------------------------------VTQIAQSIQSQLTEFRSY
    Potri.010G004100.2_P ------------------------------------------------------------------------------------------------------IMHIVQSIQTQLAEFRSY
    chr2.CM0262.290.r2.m ------------------------------------------------------------------------------------------------------VTQIAQSIESQLAEFRSY
    chr4.CM0432.850.r2.m ------------------------------------------------------------------------------------------------------------------------
    MA_6707682g0010_PICA ------------------------------------------------------------------------------------------------------ITLIVQSIQAQLAEFQSF
    AK248953.1_HORVU     ------------------------------------------------------------------------------------------------------VPQMLHSIQGQLAEFRSY
    GSMUA_AchrUn_randomP ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_015014m_M ------------------------------------------------------------------------------------------------------VMQIAQSIQTQLTEFRSY
    Bradi2g36760.1_BRADI ------------------------------------------------------------------------------------------------------VPQMLQSIQGQLAEFRSY
    chr2.CM0262.260.r2.m ------------------------------------------------------------------------------------------------------VTQIAQSIESQLAEFRSY
    selmo_79509_SELMO    ------------------------------------------------------------------------------------------------------TQHIVQSMQAQLNEFRSL
    Gorai.006G157900.1_G ------------------------------------------------------------------------------------------------------LPQIVQSIQSQLATFRSY
    Glyma13g17760.1_GLYM ------------------------------------------------------------------------------------------------------VTQIAQSIQSQLSEFRSY
    GSMUA_AchrUn_randomP ------------------------------------------------------------------------------------------------------VTQIAQSIQV--SNFIVN
    Glyma09g28814.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Ca_03092_CICAR       ------------------------------------------------------------------------------------------------------VTQIAQSIQSQLAEFRSY
    ITC1587_BchrUn_rando EDADERAKQIKKLHESIKATIEKQNERKERFPLGKFGKLKPKADVHSKCLRDMARMFMRSSYFGDYGVSSTFNVVDLSPYHVDGTNEDLRTSLFQSGEIDTGAPNLLQSARVNLADPMIL
    Cucsa.252100.1_CUCSA ------------------------------------------------------------------------------------------------------ITQIAQSIQSQLTEFRSF
    EG4P94492_ELAGV      ------------------------------------------------------------------------------------------------------MTQIAQSIQ---------
    Sb09g003070.1_SORBI  ------------------------------------------------------------------------------------------------------VPQMLQSIQGQLAEFRSY
    Tc03_g025640_THECC   ------------------------------------------------------------------------------------------------------IPQIVQSI--QLADFRSY
    GRMZM2G121510_P01_ZE ------------------------------------------------------------------------------------------------------VPQMLQSIQGQLAEFRSY

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                730       740       750       760       770       780       790       800       810       820       830       840
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    g14930.t1_CHLRE      KD----LGGPRLVRL-QLYVRREGRV-FRDEVEWDVGGGGGMAGGCGAGGGRAGGGLSPLGYAVECCAQLGLHDPAWA--------------------------------TAIAGQLEEL
    Glyma17g04750.2_GLYM -----------------LDLRVNHTL-VKDQFLWDSNNFES----------------DPKEFARLFCKDTGIEDPEVG--------------------------------PAIAFAIREQ
    MDP0000256671_MALDO  EGQDM-YTGERIVPI-KLDLRVNRTV-IRDQFLWDLNNFES----------------DPEEFAKTFCADLGIQDPEVG------------------------------------------
    evm.TU.contig_44700. ----M-FVGEKIVPI-KLDLRVNHTL-IKDQFLWDLNNFES----------------DPEDFARTFCKDLAIEDPEVG--------------------------------TK-EISMRAT
    Solyc11g013410.1.1_S VGLGV------------------------------------------------------------------------G------------------------------------------
    Medtr4g124260.1_MEDT DGQDM-YAGEKIVPI-KLDLRVNHTL-VKDQFLWDLNNFDS----------------DPEEFARTFCRDMGIEDPEVG--------------------------------PAIAFAIREQ
    orange1.1g026518m_CI EGQDM-YTAEKIVPI-KLDLRVNHTL-IKDHFLWDLNNYES----------------DPEEFARTFCNDMGIEDPEVG--------------------------------PAVAFAIREQ
    Os02g49190.1_ORYSA   EGEEM-QIREKIVPL-KIDLRINNTV-IRDQFLWDIGNLDS----------------DPEEFARTLCDDLNITDPEVG--------------------------------PAIAVSIREQ
    supercontig_146.8_CA ------------------------------------------------------------------------------------------------------------------------
    orange1.1g031052m_CI EGQDM-YTAEKIVPI-KLDLRVNHTL-IKDHFLWDLNNYES----------------DPEEFARTFCNDMGIEDPEVG--------------------------------PAVAFAIREQ
    GSVIVT01017710001_VI EGQDM-QTGEKIVPI-KLDLRVNHTL-IKDQFLWDLNNFES----------------DPEEFARTFCKDLGVEDPEVG--------------------------------PAIAVAIREQ
    Millet_GLEAN_1003226 EGQEM-QIKEKIVPL-KIDLRVNNTV-IRDQFLWDIGNLDS----------------DPEEFARTLCDDLNITDPEVG--------------------------------PAIAVSIREQ
    Solyc11g013430.1.1_S FGKNC----------------------DQISNYFDMNNFEG----------------DPEEFARTFCEDMKIEDPEVG--------------------------------PAIAIAIREQ
    C.cajan_03949_CAJCA  EGQDM-YAGEKIVPI-KLDLRVNHTL-VKDQFLWDLNNFES----------------DPEEFARIFCKDMGIEDPEVGVISL----------------------------PLSLLNMPKH
    PDK_30s65509644g002_ EGQDM-HIKEKIVPL-KIDLRVNNIV-IRDQFLWDVSNFEN----------------DPEEFARTLCEDLNIGDPEVG------------------------------------------
    orange1.1g025626m_CI EGQDM-YTAEKIVPI-KLDLRVNHTL-IKDHFLWDLNNYES----------------DPEEFARTFCNDMGIEDPEVG--------------------------------PAVAFAIREQ
    AT3G17590.2_ARATH    EGQDM-YTGEKIIPI-KLDLRVNHTL-IKDQFLWDLNNFES----------------DPEEFARTLCKDLGVEDPEVG--------------------------------PAVAFAIREQ
    CMT559C_CYAME        EHELFADRSELRLLF-TLDVRIGNIQ-LQDTFEWDALSFES----------------DPEQFSRMLCRELGL-GTEFS--------------------------------TAIAHAIREQ
    29889.m003419_RICCO  EGQDM-FTGEKFVPI-KLDLRVNRTL-IKDQFLWDLNNFDS----------------DPEDFATTFCKDLGIQDPEVA--------------------------------PAVAFAIREQ
    orange1.1g026309m_CI EGQDM-YTAEKIVPI-KLDLRVNHTL-IKDHFLWDLNNYES----------------DPEEFARTFCNDMGIEDPEVG--------------------------------PAVAFAIREQ
    Cc07_g19930_COFCA    EGQDM-YTGERVVPI-KLDLRVNHTL-IKDQFLWDLNNFES----------------DPEEFARTFCKDMGIEDPEVG--------------------------------PAIAIAIREQ
    PGSC0003DMP400048312 -----------------------------------MNNFEG----------------DPEEFARTFCEDMKIEEPEVG--------------------------------PAIAIAIREQ
    evm_27.model.AmTr_v1 EGQEM-NTVEKLLPI-KLDLRVNKTI-IRDQFLWDVSNFES----------------DPEEFARNLCRDLDIEDPEVG--------------------------------PAIAVAIREQ
    Gorai.009G000800.1_G EGQDM-YVGDKIIPI-KLDLQVNHTV-IRDQFLWDLNNFDS----------------DPEEFARTLCKDLGIEDPEVG--------------------------------PAVAFAIREQ
    Phvul.003G124500.1_P EGQDM-YAGEKIVPI-KLDLRVNHTL-VKDQFLWDLNNFES----------------DPEEFARVFCKDMGIEDPEVG--------------------------------PAIAFAIREQ
    Solyc11g013400.1.1_S EGQDM-HTGEKVVPI-KLDLRVNHTV-IKDHFFWDMNNFES----------------DPEEFARTFCEDMKIEDPEVG--------------------------------PAIAIAIREQ
    Potri.010G004100.2_P EGQDMLYTGDKIVPI-KLDLRVNNTL-IKDQFLWDMNNFES----------------DPEDFAKTFCDDLGIQDPEVGVSKATTLLSVLPLYLIRLNVDSSRPTLPYSLQPAVAFAIREQ
    chr2.CM0262.290.r2.m EGQDM-YAGEKIIPI-KLDLCVNHML-VKDQFLWDLNNFES----------------DLEELARIFCKDMGIEDPEVG--------------------------------VSISNYEAVW
    chr4.CM0432.850.r2.m -----------------LDLRVNHMRGSTSSYGLDLNNFES----------------DPEEFARIFCKDMGIEDPEVG--------------------------------LACLFSHLD-
    MA_6707682g0010_PICA EGQEM-NTGEKVLSL-KLDLMVNNSI-IKDQFLWD-------------------------------------------------------------------------------------
    AK248953.1_HORVU     EGQEM-QVKEKIMPL-KIDLRVNNTI-VRDQFLWDIGNLES----------------DPEEFARTLCDDLNITDPEVG--------------------------------PAIAVCIREQ
    GSMUA_AchrUn_randomP ----M-HIKEKIVPL-KIDLRVNNTV-IRDQFLWDISNLES----------------DPEEFARTFCKDLDIGDPEVG--------------------------------PAIAVSIREQ
    cassava4.1_015014m_M EGQDM-YTGEKIVPI-KLDLRVNHTL-IKDQFLWDLNNFDS----------------DPEEFARTFCKDLGIEDPEAG--------------------------------PAIALAIREQ
    Bradi2g36760.1_BRADI EGQEM-QIKEKIMPL-KIDLRVNNTL-VRDQFLWDIGNLDS----------------DPEEFARTLCDDLNITDPEVG--------------------------------PAIAVSIREQ
    chr2.CM0262.260.r2.m EGQDM-YAGEKIIPI-KLDLCVNHML-VKDQFLWDLNNFES----------------DPEELARIFCKDMGIEDPEVG--------------------------------VSISNYITNN
    selmo_79509_SELMO    EAQQL-STEEKVLML-KLDLRINNIV-IRDQFLWDVGDFES----------------DPEGFARGLCKDLEIEDPEVA--------------------------------PGIAFAIREQ
    Gorai.006G157900.1_G EGQDM-YVGDKIIPI-KLDLQVNHTV-IRDRFLWDLNNFDS----------------DPEEFARTLCKDLGIEDPEVE--------------------------------PAIAFAIREQ
    Glyma13g17760.1_GLYM EGQDM-YAGEKIVPI-KLDLRVNHTL-VKDQFLWDLNNFES----------------DPEEFARIFCKDTGIEDPEVG--------------------------------PAIAFAIREQ
    GSMUA_AchrUn_randomP YLLGF-------------DLVFNC---IRNRW----------------------------------------------------------------------------------------
    Glyma09g28814.1_GLYM ----M-YVGEKIVPI-KLDLCVNHTL-VKDQFLWDLDNFES----------------DHEEFAKISTRTRALNIPRL-----------------------------------------EK
    Ca_03092_CICAR       DGQDM-YAGEKIVPI-KLDLRVNHTL-VKDQFLWDLNNFDS----------------DPEEFARTFCKDMGIEDPEVG--------------------------------PAIAFAIREQ
    ITC1587_BchrUn_rando TLKIG-YLGITTAMISQIDLRVNNTV-IRDQFLWDISNLES----------------DPEEFARTFCKDLDIGDPEVG--------------------------------PAIAVSIREQ
    Cucsa.252100.1_CUCSA EGQDM-YTGEKIIPI-KLDLRVNNTL-IKDQFLWDLNNYES----------------DPEEFSRTLCKDLGIDDPEVG--------------------------------PAIAVAIREQ
    EG4P94492_ELAGV      ----------------------------------DVSNFET----------------DPEEFARTLCEDLNIEDPEVG--------------------------------AQINIAIQMS
    Sb09g003070.1_SORBI  EGQEM-QIKEKIVPL-KIDLRVNNTV-IRDQFLWDIGNLDS----------------DPEEFARTLCDDLNITDPEVG--------------------------------PAIAVSIREQ
    Tc03_g025640_THECC   EGQDM-YAGDKIVPI-KLDLRVNHTV-IRDQFLWDLNNFES----------------DPEEFSRTLCKDLGIEDPEVG--------------------------------PAIAYAIREQ
    GRMZM2G121510_P01_ZE EGQEM-QIKEKIVPL-KIDLRVNNTV-IRDQFLWDIGNLDS----------------DPEEFARTLCDDLNITDPEVG--------------------------------PAIAVSIREQ

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                850       860       870       880       890       900       910       920       930       940       950       960
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    g14930.t1_CHLRE      ARE--------------AAEDLLHHSPEVAVLPPAPSVWRPQPAT------------------------ATATATADDPVATACWQPLPPGQLPPPPPPLPAPPLEVCDADDAAGWVPVS
    Glyma17g04750.2_GLYM LNE--------------IAIQSVVSARE-SRMSKKGR-----------------------------------------------------------------------------------
    MDP0000256671_MALDO  -----------------IVVQSVASVRE-TRINKKGR--RGAEYTP-----------------------VSKVGSTGLDLVKLFGHRSSVVRK----------------RKEWDVY----
    evm.TU.contig_44700. LMR---------------------------------------------------------------------------------------------------------------------
    Solyc11g013410.1.1_S ------------------------------------------------------------------------------------------------------------------------
    Medtr4g124260.1_MEDT LYE--------------IVVQSVVSARE-SRLSKKGR--RGADFFP-----------------------VSKGGAVAVDLVKLFGIKSSVVRK----------------RKEWDVY----
    orange1.1g026518m_CI LYE--------------IAIQSVASARE-IKISKKGR--RGAEHAI-----------------------SSKGGGNALDLMKLFRYNSSVVRK----------------RKEWYVY----
    Os02g49190.1_ORYSA   LYE--------------IASQSVSAMREAARVSKKGR--RAPEFAS-----------------------NSKAMNNSLDLFKYFGSKGSVVRK----------------RKEWYLY----
    supercontig_146.8_CA ------------------------------------------------------------------------------------------------------------------------
    orange1.1g031052m_CI LYE--------------VMII---------------------------------------------------------------------------------------------------
    GSVIVT01017710001_VI LYE--------------IAIQSVTSARE-TRISKKGR--RGAEHIP-----------------------ASKASGTALDLMKLFGNKSSIIRK----------------RREWDVY----
    Millet_GLEAN_1003226 LYE--------------IASQSVSVMRE-KQLSKKGR--RAPEFSS-----------------------NSKAVNNAVDLFKYFGSKGSVIRK----------------RKEWYLY----
    Solyc11g013430.1.1_S LYE--------------IAKQGVAFMRE-SRTNKKGR--KGMEHLS-----------------------ASKVGSPALDLGKLFDPEGSIQRK----------------MSERDAY----
    C.cajan_03949_CAJCA  KHTDMLEKSNRLNCKMLIAIQSVVSARE-SRMSKKGR--RGAEYTP-----------------------VSKGGAVAVDLVKLFSPKSSVVRK----------------RKEWDVY----
    PDK_30s65509644g002_ -----------------VSKSNIS------------------------------------------------------------------------------------------------
    orange1.1g025626m_CI LYE--------------IAIQSVASARE-IKISKKGR--RGAEHAI-----------------------SSKGGGNALDLMKLFRYNSSVVRY------------------VWSFHTEFS
    AT3G17590.2_ARATH    LYE--------------IAIQSVASARE-SRLSKKGR--RGSDHGS-----------------------ASKASGLSMDLMKLFSFKSSVVRK----------------RKDLDVY----
    CMT559C_CYAME        LQD--------------VWAGVAYSQKS-ILESVHPR---------------------------------------------------ITIRD----------------GEDWELP----
    29889.m003419_RICCO  LYE--------------IATQSVATARE-SRLTKKGR--RGFEYIP-----------------------ASKAGGTASDLMKLFSNRYSMIRK----------------RKEWDVY----
    orange1.1g026309m_CI LYE--------------IAIQSVASARE-IKISKKGR--RGAEHAI-----------------------SSKGGGNALDLMKLFRYNSSVVRK----------------RKEWYVY----
    Cc07_g19930_COFCA    LYE--------------IAVQSVASAKE-SRMIKKGR--KGFEHIP-----------------------ISKAGGIAVDLVKSFGNKSSVIRK----------------RKEWDVF----
    PGSC0003DMP400048312 LYE--------------IAKQGVASVRE-SRTNKKGR--RGMEHLS-----------------------ASKVGSPALDLGKLFDPDGSIQRG----------------KSECDAF----
    evm_27.model.AmTr_v1 LYE--------------IAVQNVASARE-TRISKKGRRERGTEHAL-----------------------ASKMGGTALDLMKLLGSKTSVVRR----------------RREWDLY----
    Gorai.009G000800.1_G LYE--------------IAIQNVTSARE-NRISKKGR--RAAEHFT-----------------------PSKASGAALDLMKLFSFRSSVVRK----------------RKEWDYY----
    Phvul.003G124500.1_P LFE--------------IAIQSVVSARE-SRMSKKGR--RGAEYTQ-----------------------ISKGGAVAVDLVKLFGPKSSVVRK----------------RKEWDVY----
    Solyc11g013400.1.1_S LYE--------------IAKQSVASARE-SRANKKGR--RGMEHPS-----------------------ASKVGLPALDLGKLFSIKSSVVRK----------------KRDADAY----
    Potri.010G004100.2_P LYE--------------TAVQSVAAARE-IRMSKKGR--RGAEYVP-----------------------ASKAGGTSLDLMKLFNNKYSVVRK----------------RKDWDVY----
    chr2.CM0262.290.r2.m IP----------------------------------------------------------------------------------------------------------------------
    chr4.CM0432.850.r2.m -----------------CYSKCGFCKRKKIKQEGSSRGQSGFQYSMRCCGSGLGQVIWSEIY----------------------------------------------------------
    MA_6707682g0010_PICA ------------------------------------------------------------------------------------------------------------------------
    AK248953.1_HORVU     LYE--------------IASQTVSAMRE-AKMSKK-R--RAPEFAS-----------------------NSKAMNNAVDMFKYFGSKGSVIRK----------------RKEWYLY----
    GSMUA_AchrUn_randomP LYE--------------IATQSISSARE-TRVGKKGR--RGADIVA-----------------------NSKAGN-TVDLGKLFGSKGSVIRK----------------RKEWYLY----
    cassava4.1_015014m_M LYE--------------IAIQSVATARE-SRLSKKGR--RGFEYIP-----------------------AHKAGGTALDLMKLFSNKYSVVRK----------------RKEWDVY----
    Bradi2g36760.1_BRADI LYE--------------IASQSVSAMRE-AKVSKK-R--RAPEFAS-----------------------NSKAMNNAVDMFKYFGSKGSVIRK----------------RKEWYLY----
    chr2.CM0262.260.r2.m KL----------------------------------------------------------------------------------------------------------------------
    selmo_79509_SELMO    LYE--------------IAKQNVTSARE-TRITKKARRERGIEFNH-----------------------ATTSGTTALNLMRRPNNKISIIRK----------------KTEWELF----
    Gorai.006G157900.1_G LYE--------------IAIQNVTTARE-NRISKKGR--RAAEHFTPRFLCCFLLIWSEIGGIFFLIRMVCKASGAALDLMKLFSFGSSVVRK----------------LQKKKILMVCL
    Glyma13g17760.1_GLYM LYE--------------IAIQSVVSARE-SRMSKKGR--RGAEYTP-----------------------VSKGGAAAVDLVKLFGPKSSVVRK----------------RKEWDVY----
    GSMUA_AchrUn_randomP ------------------------------------------------------------------------------------------------------------------------
    Glyma09g28814.1_GLYM VYN--------------LLSLVIS------------------------------------------------------------------------------------------------
    Ca_03092_CICAR       LYE--------------IAIQSVVSARE-SRLSKKGR--RGADFTP-----------------------VSKGGAVAVDLVKLFGIKSSVVRK----------------RKEWDVY----
    ITC1587_BchrUn_rando LYE--------------IATQSISSARE-TRVGKKGR--RGADIVA-----------------------NSKAGN-TVDLGKLFGSKGSVIRK----------------RKEWYLY----
    Cucsa.252100.1_CUCSA LYE--------------IAVQNVASARE-SRMSKKGR--RGFEHVP-----------------------VSKTGGASVDLVKLFGHRSSVVRK----------------RKDWDIY----
    EG4P94492_ELAGV      LDDQWQLKE--------VARHRAQFGLSAYEGGSRSRSTAAESES---------------------------------------------------------------------------
    Sb09g003070.1_SORBI  LYE--------------IASQSVSVMRE-KQMSKKGR--RAPEFSS-----------------------NSKAVNNAVDLFKYFGSKGSVIRK----------------RKEWYLY----
    Tc03_g025640_THECC   LYE--------------IAIQNVTSARE-NRISKKGR--RGAEHFP-----------------------PSKAGGAALDLIKLFSFRSSVVRK----------------RKEWGYY----
    GRMZM2G121510_P01_ZE LYE--------------IASQSVSVMRE-KQMSKKGR--RAPEFSS-----------------------NSKAVNNAVDLFKYFGSKGSVIRK----------------RKEWYLY----

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                970       980       990      1000      1010      1020      1030      1040      1050      1060      1070      1080
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    g14930.t1_CHLRE      RYGAVPLPPKPPPPPATAAVDAVGISNGGGRSSSGGGRVGLPRMEPYDPAQDLEAERRARREAKLRHRSGGGGGAAGEHGHGHGHRHHHHHHHHGTASPPGGAQQHHHQHHSRASHGGSQ
    Glyma17g04750.2_GLYM ------------------------------------------------------------------------------------------------------------------------
    MDP0000256671_MALDO  ----------------------------------------EPIVDLLSTEEVEALQAKEERIAR--------APGTYRRLERSQKS----------------------------------
    evm.TU.contig_44700. -----------------------------------------------------NCQDQEKCVAG--------------------------------------------------------
    Solyc11g013410.1.1_S ------------------------------------------------------------------------------------------------------------------------
    Medtr4g124260.1_MEDT ----------------------------------------EPIVDLLSNEEVDILEAKEERNFR--------------------------------------------------------
    orange1.1g026518m_CI ----------------------------------------EPIVDILSNEEVDALEAREDRNTR--------------------------------------------------------
    Os02g49190.1_ORYSA   ----------------------------------------EPVVDVITNEEVGVTDATEEINSRNA------------------------------------------------------
    supercontig_146.8_CA ------------------------------------------------------------------------------------------------------------------------
    orange1.1g031052m_CI ----------------------------------------PPL-----------------------------------------------------------------------------
    GSVIVT01017710001_VI ----------------------------------------EPIVDILSNEEVDVLEAREDRNARRID-----------------------------------------------------
    Millet_GLEAN_1003226 ----------------------------------------EPVVDVVANEE----DGKEEPNNSSRPKKRAEEEKVASLQSL--------------------------------------
    Solyc11g013430.1.1_S ----------------------------------------GPVVDHLSKEEVDALEAREERLPR--------------------------------------------------------
    C.cajan_03949_CAJCA  ----------------------------------------EPIVDLLSNEEVDALEAKEERNFR--------------------------------------------------------
    PDK_30s65509644g002_ ------------------------------------------------------------------------------------------------------------------------
    orange1.1g025626m_CI ----------------------------------------WKITSLLKHEYFINYNLILVGSGKFHDCFTSM------------------------------------------------
    AT3G17590.2_ARATH    ----------------------------------------EPVVDLLTSEEVDALEAREERHAR--------------------------------------------------------
    CMT559C_CYAME        ----------------------------------------GPAVRVLSKEELEEVERREDRSARAMRRSQRKSGLSWGLAPAPTLR----------------------------------
    29889.m003419_RICCO  ----------------------------------------EPIVDLLSNEEVEALEAREDRNVR--------------------------------------------------------
    orange1.1g026309m_CI ----------------------------------------EPIVDILSNEEVDALEAREDRNTR--------------------------------------------------------
    Cc07_g19930_COFCA    ----------------------------------------EPIVDLLSNEEVDALEATEERNAR--------------------------------------------------------
    PGSC0003DMP400048312 ----------------------------------------EPIVSHLSNEEVDALEAREERLPR--------------------------------------------------------
    evm_27.model.AmTr_v1 ----------------------------------------EPVVDILSNEEVEALEVREERNAR--------MKKMLDEKDDGYMI----------------------------------
    Gorai.009G000800.1_G ----------------------------------------KPVLDLLSNEEVDALEAKEERSGR--------------------------------------------------------
    Phvul.003G124500.1_P ----------------------------------------EPIVDLLSNEEVDALEAKEERNFR--------------------------------------------------------
    Solyc11g013400.1.1_S ----------------------------------------EPIVDHLSNEEVDALEAKEERSAR--------------------------------------------------------
    Potri.010G004100.2_P ----------------------------------------GPMVDLLSNEEVDALEAREERNARSMI-----------------------------------------------------
    chr2.CM0262.290.r2.m ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0432.850.r2.m ------------------------------------------------------------------------------------------------------------------------
    MA_6707682g0010_PICA ------------------------------------------------------------------------------------------------------------------------
    AK248953.1_HORVU     ----------------------------------------EPVVDVVPKEEAVVVDAKEQLK----------------------------------------------------------
    GSMUA_AchrUn_randomP ----------------------------------------EPIVDILSNEEVGALDAREELNAR--------LKRKLDEKEESFQT----------------------------------
    cassava4.1_015014m_M ----------------------------------------EPIVDLLSTEEVDALEAREERNAR--------------------------------------------------------
    Bradi2g36760.1_BRADI ----------------------------------------APVVDVVPNEEVVVVDTTEGA-----------------------------------------------------------
    chr2.CM0262.260.r2.m ------------------------------------------------------------------------------------------------------------------------
    selmo_79509_SELMO    ----------------------------------------EPFVEVLTEEESNTLDAKE--NAR--------------------------------------------------------
    Gorai.006G157900.1_G LLSVASGKERSGIIINPFLTFYLMRTYMLSKPKKKGVADPDSEVVMFAKKDCKRLEACQRTTILYINLLWYSLPLLGSVGFFVHFI----------------------------------
    Glyma13g17760.1_GLYM ----------------------------------------EPIVDLLSNEEVDALEAKEERNFR--------------------------------------------------------
    GSMUA_AchrUn_randomP ------------------------------------------------------------------------------------------------------------------------
    Glyma09g28814.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Ca_03092_CICAR       ----------------------------------------EPIVDLLSNEEVDVLEAKEEKNFR--------------------------------------------------------
    ITC1587_BchrUn_rando ----------------------------------------EPIVDILSNEEVGALDAREELNARFFDLLHASLKRKLDEKEESFQT----------------------------------
    Cucsa.252100.1_CUCSA ----------------------------------------EPIVDLLSNEEVDALEAKEERTAR--------------------------------------------------------
    EG4P94492_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Sb09g003070.1_SORBI  ----------------------------------------EPVVDVVASEE----DGKEEVNNSSRPKKRAEEEKVASLQSL--------------------------------------
    Tc03_g025640_THECC   ----------------------------------------KPTLDLLSNEDVDALEAKEERSGR--------------------------------------------------------
    GRMZM2G121510_P01_ZE ----------------------------------------EPVVDVVANDE----DGKEEANNSSRPKKRADEEKAASLQSL--------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                               1090      1100      1110      1120      1130      1140      1150      1160      1170      1180      1190      1200
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    g14930.t1_CHLRE      PPPSMPNSPAGHAPPHPPHPSHPPHPSQQHPQQQQHPPGQQHPQGQQHPQGQQQHPQGQQQHPPGQQHPQGQQQHPQGQPQTPGQVKREEEGQVKREAHAMSPGAVGPVVKSEQLGAQQQ
    Glyma17g04750.2_GLYM ------------------------------------------------------------------------------------------------------------------------
    MDP0000256671_MALDO  -----------------------------------------------------------------------V------------------------------------------------
    evm.TU.contig_44700. ------------------------------------------------------------------------------------------------------------------------
    Solyc11g013410.1.1_S ------------------------------------------------------------------------------------------------------------------------
    Medtr4g124260.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    orange1.1g026518m_CI ------------------------------------------------------------------------------------------------------------------------
    Os02g49190.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    supercontig_146.8_CA ------------------------------------------------------------------------------------------------------------------------
    orange1.1g031052m_CI ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01017710001_VI ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1003226 ------------------------------------------------------------------------------------------------------------------------
    Solyc11g013430.1.1_S ------------------------------------------------------------------------------------------------------------------------
    C.cajan_03949_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    PDK_30s65509644g002_ ------------------------------------------------------------------------------------------------------------------------
    orange1.1g025626m_CI ------------------------------------------------------------------------------------------------------------------------
    AT3G17590.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    CMT559C_CYAME        -----------------------------------------------------------------------ERSVDSTVFFGPRQAVAEERPKRRRNQNPVDSEGRPVVACSHCGRHPSK
    29889.m003419_RICCO  ------------------------------------------------------------------------------------------------------------------------
    orange1.1g026309m_CI ------------------------------------------------------------------------------------------------------------------------
    Cc07_g19930_COFCA    ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400048312 ------------------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 -----------------------------------------------------------------------R------------------------------------------------
    Gorai.009G000800.1_G ------------------------------------------------------------------------------------------------------------------------
    Phvul.003G124500.1_P ------------------------------------------------------------------------------------------------------------------------
    Solyc11g013400.1.1_S ------------------------------------------------------------------------------------------------------------------------
    Potri.010G004100.2_P ------------------------------------------------------------------------------------------------------------------------
    chr2.CM0262.290.r2.m ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0432.850.r2.m ------------------------------------------------------------------------------------------------------------------------
    MA_6707682g0010_PICA ------------------------------------------------------------------------------------------------------------------------
    AK248953.1_HORVU     ------------------------------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomP -----------------------------------------------------------------------RYSHG--------------------------------------------
    cassava4.1_015014m_M ------------------------------------------------------------------------------------------------------------------------
    Bradi2g36760.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    chr2.CM0262.260.r2.m ------------------------------------------------------------------------------------------------------------------------
    selmo_79509_SELMO    ------------------------------------------------------------------------------------------------------------------------
    Gorai.006G157900.1_G ------------------------------------------------------------------------------------------------------------------------
    Glyma13g17760.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomP ------------------------------------------------------------------------------------------------------------------------
    Glyma09g28814.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Ca_03092_CICAR       ------------------------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando -----------------------------------------------------------------------RYSHG--------------------------------------------
    Cucsa.252100.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    EG4P94492_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Sb09g003070.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    Tc03_g025640_THECC   ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G121510_P01_ZE ------------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                               1210      1220      1230      1240      1250      1260      1270      1280      1290      1300      1310      1320
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    g14930.t1_CHLRE      HPHQHPHQHPGAAAPQQPHHHYQQPAQQPQQHASFMQPGPAHPPQPQQQQHPHQQQQQHTAAAAAVAVTAPQQFGQVPPQQQPQYQQPQQQQYQPPQQPQQQYQQYVQPPQQPQYQQPQQ
    Glyma17g04750.2_GLYM ------------------------------------------------------------------------------------------------------------------------
    MDP0000256671_MALDO  ----------------------------------------------TDVL----------------------------------------------------------------------
    evm.TU.contig_44700. ------------------------------------------------------------------------------------------------------------------------
    Solyc11g013410.1.1_S ------------------------------------------------------------------------------------------------------------------------
    Medtr4g124260.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    orange1.1g026518m_CI ------------------------------------------------------------------------------------------------------------------------
    Os02g49190.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    supercontig_146.8_CA ------------------------------------------------------------------------------------------------------------------------
    orange1.1g031052m_CI ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01017710001_VI ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1003226 ------------------------------------------------------------------------------------------------------------------------
    Solyc11g013430.1.1_S ------------------------------------------------------------------------------------------------------------------------
    C.cajan_03949_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    PDK_30s65509644g002_ ------------------------------------------------------------------------------------------------------------------------
    orange1.1g025626m_CI ------------------------------------------------------------------------------------------------------------------------
    AT3G17590.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    CMT559C_CYAME        TPLMRVGPRGLKNEICNSCGLYYRKYGELPTHYKGYPIGPGYPPPPGSQEH---------------------------------------------------------------------
    29889.m003419_RICCO  ------------------------------------------------------------------------------------------------------------------------
    orange1.1g026309m_CI ------------------------------------------------------------------------------------------------------------------------
    Cc07_g19930_COFCA    ------------------------------------------------------------------------------------------------------------------------
    PGSC0003DMP400048312 ------------------------------------------------------------------------------------------------------------------------
    evm_27.model.AmTr_v1 ----------------------------------------------YTRM----------------------------------------------------------------------
    Gorai.009G000800.1_G ------------------------------------------------------------------------------------------------------------------------
    Phvul.003G124500.1_P ------------------------------------------------------------------------------------------------------------------------
    Solyc11g013400.1.1_S ------------------------------------------------------------------------------------------------------------------------
    Potri.010G004100.2_P ------------------------------------------------------------------------------------------------------------------------
    chr2.CM0262.290.r2.m ------------------------------------------------------------------------------------------------------------------------
    chr4.CM0432.850.r2.m ------------------------------------------------------------------------------------------------------------------------
    MA_6707682g0010_PICA ------------------------------------------------------------------------------------------------------------------------
    AK248953.1_HORVU     ------------------------------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomP ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_015014m_M ------------------------------------------------------------------------------------------------------------------------
    Bradi2g36760.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    chr2.CM0262.260.r2.m ------------------------------------------------------------------------------------------------------------------------
    selmo_79509_SELMO    ------------------------------------------------------------------------------------------------------------------------
    Gorai.006G157900.1_G ------------------------------------------------------------------------------------------------------------------------
    Glyma13g17760.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomP ------------------------------------------------------------------------------------------------------------------------
    Glyma09g28814.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Ca_03092_CICAR       ------------------------------------------------------------------------------------------------------------------------
    ITC1587_BchrUn_rando ------------------------------------------------------------------------------------------------------------------------
    Cucsa.252100.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    EG4P94492_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Sb09g003070.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    Tc03_g025640_THECC   ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G121510_P01_ZE ------------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                               1330      1340      1350      1360      1370
                         =========+=========+=========+=========+=========+===
    g14930.t1_CHLRE      QQQQYQPPPQLQQPQQYALPPPQQMQQPMGMQPGPPRPTQQQQQPHPQFPYGQ
    Glyma17g04750.2_GLYM -----------------------------------------------------
    MDP0000256671_MALDO  -----------------------------------------------------
    evm.TU.contig_44700. -----------------------------------------------------
    Solyc11g013410.1.1_S -----------------------------------------------------
    Medtr4g124260.1_MEDT -----------------------------------------------------
    orange1.1g026518m_CI -----------------------------------------------------
    Os02g49190.1_ORYSA   -----------------------------------------------------
    supercontig_146.8_CA -----------------------------------------------------
    orange1.1g031052m_CI -----------------------------------------------------
    GSVIVT01017710001_VI -----------------------------------------------------
    Millet_GLEAN_1003226 -----------------------------------------------------
    Solyc11g013430.1.1_S -----------------------------------------------------
    C.cajan_03949_CAJCA  -----------------------------------------------------
    PDK_30s65509644g002_ -----------------------------------------------------
    orange1.1g025626m_CI -----------------------------------------------------
    AT3G17590.2_ARATH    -----------------------------------------------------
    CMT559C_CYAME        ---------------------------------------------------DA
    29889.m003419_RICCO  -----------------------------------------------------
    orange1.1g026309m_CI -----------------------------------------------------
    Cc07_g19930_COFCA    -----------------------------------------------------
    PGSC0003DMP400048312 -----------------------------------------------------
    evm_27.model.AmTr_v1 -----------------------------------------------------
    Gorai.009G000800.1_G -----------------------------------------------------
    Phvul.003G124500.1_P -----------------------------------------------------
    Solyc11g013400.1.1_S -----------------------------------------------------
    Potri.010G004100.2_P -----------------------------------------------------
    chr2.CM0262.290.r2.m -----------------------------------------------------
    chr4.CM0432.850.r2.m -----------------------------------------------------
    MA_6707682g0010_PICA -----------------------------------------------------
    AK248953.1_HORVU     -----------------------------------------------------
    GSMUA_AchrUn_randomP -----------------------------------------------------
    cassava4.1_015014m_M -----------------------------------------------------
    Bradi2g36760.1_BRADI -----------------------------------------------------
    chr2.CM0262.260.r2.m -----------------------------------------------------
    selmo_79509_SELMO    -----------------------------------------------------
    Gorai.006G157900.1_G -----------------------------------------------------
    Glyma13g17760.1_GLYM -----------------------------------------------------
    GSMUA_AchrUn_randomP -----------------------------------------------------
    Glyma09g28814.1_GLYM -----------------------------------------------------
    Ca_03092_CICAR       -----------------------------------------------------
    ITC1587_BchrUn_rando -----------------------------------------------------
    Cucsa.252100.1_CUCSA -----------------------------------------------------
    EG4P94492_ELAGV      -----------------------------------------------------
    Sb09g003070.1_SORBI  -----------------------------------------------------
    Tc03_g025640_THECC   -----------------------------------------------------
    GRMZM2G121510_P01_ZE -----------------------------------------------------

    Selected Cols:                                                            

    Gaps Scores: