GreenPhyl V3 Families

Number of clusters: 15044

  Family Id Family Name Number of sequences Access Owner
DNA-3-methyladenine glycosylase II family [OBSOLETE]
GP002599_V3
DNA-3-methyladenine glycosylase II family 46 public - read only greenphyl_v3
DNA-binding bromodomain-containing family (plant-specificity: 19%) [OBSOLETE]
GP000126_V3
DNA-binding bromodomain-containing family 696 public - read only greenphyl_v3
DNA-binding family family (plant-specificity: 100%) [OBSOLETE]
GP000284_V3
DNA-binding family family 380 public - read only greenphyl_v3
DNA-binding protein BIN4 homologs family (plant-specificity: 100%) [OBSOLETE]
GP003320_V3
DNA-binding protein BIN4 homologs family 36 public - read only greenphyl_v3
DNA-binding protein phosphatase family [OBSOLETE]
GP000042_V3
DNA-binding protein phosphatase family 1373 public - read only greenphyl_v3
DNA-binding WRKY group (plant-specificity: 100%) [OBSOLETE]
GP000248_V3
DNA-binding WRKY group 425 public - read only greenphyl_v3
Dna-directed rna polymerase ii, rpb10/rpon subunit type family [OBSOLETE]
GP002704_V3
Dna-directed rna polymerase ii, rpb10/rpon subunit type family 44 public - read only greenphyl_v3
DNA-directed RNA polymerase III largest subunit family [OBSOLETE]
GP007824_V3
DNA-directed RNA polymerase III largest subunit family 4 public - read only greenphyl_v3
Dna-directed rna polymerase rpb8 subunit family (plant-specificity: 9%) [OBSOLETE]
GP001984_V3
Dna-directed rna polymerase rpb8 subunit family 66 public - read only greenphyl_v3
DNA-directed RNA polymerase, alpha subunit family (plant-specificity: 40%) [OBSOLETE]
GP002182_V3
DNA-directed RNA polymerase, alpha subunit family 59 public - read only greenphyl_v3
DNA-directed RNA polymerase, subunit C11/M/9 family (plant-specificity: 9%) [OBSOLETE]
GP004118_V3
DNA-directed RNA polymerase, subunit C11/M/9 family 28 public - read only greenphyl_v3
DNA-repair protein XRCC4 family (plant-specificity: 19%) [OBSOLETE]
GP004716_V3
DNA-repair protein XRCC4 family 22 public - read only greenphyl_v3
DNA/panthothenate metabolism flavoprotein family [OBSOLETE]
GP002666_V3
DNA/panthothenate metabolism flavoprotein family 45 public - read only greenphyl_v3
DNA/RNA helicase superfamily [OBSOLETE]
GP000030_V3
DNA/RNA helicase superfamily 1600 public - read only greenphyl_v3
Dolichol kinase family [OBSOLETE]
GP003556_V3
Dolichol kinase family 33 public - read only greenphyl_v3
Dolichol phosphate-mannose biosynthesis regulatory family [OBSOLETE]
GP004766_V3
Dolichol phosphate-mannose biosynthesis regulatory family 22 public - read only greenphyl_v3
Dolichol-phosphate mannosyltransferase family [OBSOLETE]
GP002935_V3
Dolichol-phosphate mannosyltransferase family 40 public - read only greenphyl_v3
Dolichyl-diphosphooligosaccharide protein glycosyltransferase family [OBSOLETE]
GP002316_V3
Dolichyl-diphosphooligosaccharide protein glycosyltransferase family 53 public - read only greenphyl_v3
Domain in Rb-related Pathway family (plant-specificity: 30%) [OBSOLETE]
GP001645_V3
Domain in Rb-related Pathway family 82 public - read only greenphyl_v3
Dormancy/auxin associated family (plant-specificity: 100%) [OBSOLETE]
GP001239_V3
Dormancy/auxin associated family 111 public - read only greenphyl_v3
Double-strand break repair protein mre11 family (plant-specificity: 14%) [OBSOLETE]
GP003132_V3
Double-strand break repair protein mre11 family 38 public - read only greenphyl_v3
Double-stranded RNA-binding domain containing family (plant-specificity: 40%) [OBSOLETE]
GP003577_V3
Double-stranded RNA-binding domain containing family 32 public - read only greenphyl_v3
Double-stranded RNA-binding domain containing family [OBSOLETE]
GP009982_V3
Double-stranded RNA-binding domain containing family 2 public - read only greenphyl_v3
Double-stranded RNA-binding domain containing family [OBSOLETE]
GP013490_V3
Double-stranded RNA-binding domain containing family 2 public - read only greenphyl_v3
Dp transcription factor family [OBSOLETE]
GP001895_V3
Dp transcription factor family 70 public - read only greenphyl_v3
DSBA oxidoreductase family [OBSOLETE]
GP002840_V3
DSBA oxidoreductase family 42 public - read only greenphyl_v3
DTA4(downstream target of AGL15-4)homologs family (plant-specificity: 97%) [OBSOLETE]
GP003015_V3
DTA4(downstream target of AGL15-4)homologs family 38 public - read only greenphyl_v3
DTW domain-containing protein family (plant-specificity: 9%) [OBSOLETE]
GP004787_V3
DTW domain-containing protein family 21 public - read only greenphyl_v3
Dual specificity phosphatase family [OBSOLETE]
GP001572_V3
Dual specificity phosphatase family 86 public - read only greenphyl_v3
Dual specificity protein phosphatase family (plant-specificity: 19%) [OBSOLETE]
GP000480_V3
Dual specificity protein phosphatase family 272 public - read only greenphyl_v3
DVL family (plant-specificity: 100%) [OBSOLETE]
GP001465_V3
DVL family 93 public - read only greenphyl_v3
DWARF27 Homologs Family (plant-specificity: 30%) [OBSOLETE]
GP001661_V3
DWARF27 Homologs Family 81 public - read only greenphyl_v3
DYAD homolog family (plant-specificity: 100%) [OBSOLETE]
GP002144_V3
DYAD homolog family 60 public - read only greenphyl_v3
Dymeclin family (plant-specificity: 9%) [OBSOLETE]
GP003335_V3
Dymeclin family 36 public - read only greenphyl_v3
Dynamin superfamily [OBSOLETE]
GP000227_V3
Dynamin superfamily 459 public - read only greenphyl_v3
Dynein heavy chain, flagellar outer arm family [OBSOLETE]
GP002998_V3
Dynein heavy chain, flagellar outer arm family 40 public - read only greenphyl_v3
Dynein light chain type 1 and 2 family (plant-specificity: 9%) [OBSOLETE]
GP000704_V3
Dynein light chain type 1 and 2 family 202 public - read only greenphyl_v3
E1 protein and Def2/Der2 allergen family [OBSOLETE]
GP007118_V3
E1 protein and Def2/Der2 allergen family 4 public - read only greenphyl_v3
E2F transcription factor family [OBSOLETE]
GP000613_V3
E2F transcription factor family 226 public - read only greenphyl_v3
E2F-associated phosphoprotein domain containing family [OBSOLETE]
GP004561_V3
E2F-associated phosphoprotein domain containing family 24 public - read only greenphyl_v3
E3 ubiquitin-protein ligase CCNP1IP1 family (plant-specificity: 55%) [OBSOLETE]
GP002754_V3
E3 ubiquitin-protein ligase CCNP1IP1 family 42 public - read only greenphyl_v3
E3 ubiquitin-protein ligase HOS1 homologs family (plant-specificity: 95%) [OBSOLETE]
GP003260_V3
E3 ubiquitin-protein ligase HOS1 homologs family 35 public - read only greenphyl_v3
E3 ubiquitin-protein ligase UBR4 family (plant-specificity: 19%) [OBSOLETE]
GP002761_V3
E3 ubiquitin-protein ligase UBR4 family 43 public - read only greenphyl_v3
E3 ubiquitin-protein ligase, HECT family (plant-specificity: 9%) [OBSOLETE]
GP000314_V3
E3 ubiquitin-protein ligase, HECT family 362 public - read only greenphyl_v3
Early nodulin 93 family (plant-specificity: 100%) [OBSOLETE]
GP001723_V3
Early nodulin 93 family 78 public - read only greenphyl_v3
Early responsive to dehydratation 15 homologs family (plant-specificity: 100%) [OBSOLETE]
GP001355_V3
Early responsive to dehydratation 15 homologs family 102 public - read only greenphyl_v3
ECA1 gametogenesis related family (plant-specificity: 100%) [OBSOLETE]
GP002027_V3
ECA1 gametogenesis related family 64 public - read only greenphyl_v3
EF-hand domain containing group (plant-specificity: 90%) [OBSOLETE]
GP002933_V3
EF-hand domain containing group 40 public - read only greenphyl_v3
EF-hand-like domain containing group (plant-specificity: 98%) [OBSOLETE]
GP004643_V3
EF-hand-like domain containing group 23 public - read only greenphyl_v3
EIF4-gamma/eIF5/eIF2-epsilon superfamily [OBSOLETE]
GP001862_V3
EIF4-gamma/eIF5/eIF2-epsilon superfamily 71 public - read only greenphyl_v3