Family GP001011_V3


Family ID
Expressed or hypothetical protein group (plant-specificity: 99%) [OBSOLETE]
GP001011_V3 OBSOLETE  add to my list
Family name Expressed or hypothetical protein group
Creation date (last update: 2016-09-27 12:16:19)
Level 1
Type group
Owner greenphyl_v3
Evidence N/A
Access public - read only
Family description / comments
Sequences 142




Level Family ID (number of sequences)
1 GP001011_V3 (142)
2
(plant-specificity: 100%) [OBSOLETE]
GP017895_V3 (55)
(plant-specificity: 99%) [OBSOLETE]
GP018302_V3 (49)
(plant-specificity: 99%) [OBSOLETE]
GP019381_V3 (38)
3
(plant-specificity: 100%) [OBSOLETE]
GP042576_V3 (55)
(plant-specificity: 99%) [OBSOLETE]
GP042999_V3 (49)
(plant-specificity: 99%) [OBSOLETE]
GP044247_V3 (38)
4
(plant-specificity: 100%) [OBSOLETE]
GP072039_V3 (55)
(plant-specificity: 99%) [OBSOLETE]
GP072498_V3 (49)
(plant-specificity: 99%) [OBSOLETE]
GP073788_V3 (38)
Table 1: This table displays which relationship has the selected custom family with other families.






Sequence total: 142
Species Count (w/o splice) Count (w/ splice)
2 2
10 10
10 10
4 4
4 5
7 9
6 6
10 10
4 4
7 7
6 6
10 14
5 5
7 7
6 13
12 12
4 4
14 14


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[Masking step 1 details] [Masking step 2 details] [Filtration details]

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Alignment and filtration statistics:

Overall family sequences Sequences used for alignment (w/o splice) Sequences kept after filtration [min; median; max] ~average sequence length Alignment length Masked alignment length
142 128 (90%) 128 (90%) [79; 1065; 2127] ~1093 1282 1282