Family GP001248_V3
Family ID |
alternative oxidase family (plant-specificity: 9%) [OBSOLETE]
GP001248_V3 OBSOLETE
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|
---|---|
Family name | alternative oxidase family |
Creation date | (last update: 2016-09-27 12:19:47) |
Level | 1 |
Type | family |
Owner | greenphyl_v3 |
Evidence | IEA:PIRSF |
Access | public - read only |
Family description / comments | |
Sequences | 112 |
Associated GPv4 family |
alternative oxidase family
GP001248
|
Level | Family ID (number of sequences) |
---|---|
1 | GP001248_V3 (112) |
2 |
(plant-specificity: 25%) [OBSOLETE]
GP017370_V3
(66)
(plant-specificity: 11%) [OBSOLETE]
GP018495_V3
(46)
|
3 |
(plant-specificity: 25%) [OBSOLETE]
GP042036_V3
(66)
(plant-specificity: 11%) [OBSOLETE]
GP043211_V3
(46)
|
4 |
(plant-specificity: 25%) [OBSOLETE]
GP071444_V3
(66)
(plant-specificity: 11%) [OBSOLETE]
GP072723_V3
(46)
|
Table 1:
This table displays which relationship has the selected custom family with other
families.
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(click on the button above to get your protein list)
Download alignment file (filtered):[ FASTA ]
[Masking step 1 details] [Masking step 2 details] [Filtration details]
You can filter species displayed in the phylogenomic tree by checking the species you want:
Alignment and filtration statistics:
Overall family sequences | Sequences used for alignment (w/o splice) | Sequences kept after filtration | [min; median; max] ~average sequence length | Alignment length | Masked alignment length |
---|---|---|---|---|---|
112 | 99 (88%) | 99 (88%) | [65; 331; 2118] ~322 | 297 | 297 |