Family GP001342_V3


Family ID
Asparagine synthase, glutamine-hydrolyzing Family (plant-specificity: 42%) [OBSOLETE]
GP001342_V3 OBSOLETE  add to my list
Family name Asparagine synthase, glutamine-hydrolyzing Family
Creation date (last update: 2016-09-27 12:21:08)
Level 1
Type family
Owner greenphyl_v3
Evidence IEA:InterPro
Access public - read only
Family description / comments
Sequences 102
Associated GPv4 family
Asparagine synthase, glutamine-hydrolyzing Family
GP001342




Level Family ID (number of sequences)
1 GP001342_V3 (102)
2
(plant-specificity: 42%) [OBSOLETE]
GP016448_V3 (102)
3
(plant-specificity: 42%) [OBSOLETE]
GP041070_V3 (102)
4
(plant-specificity: 42%) [OBSOLETE]
GP070467_V3 (102)
Table 1: This table displays which relationship has the selected custom family with other families.






Sequence total: 102
Species Count (w/o splice) Count (w/ splice)
1 1
1 1
2 2
4 4
1 1
3 3
5 5
2 5
3 4
5 10
3 5
4 4
3 3
3 3
2 2
3 3
2 2
2 2
3 12
17 17
3 4
7 9


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[Masking step 1 details] [Masking step 2 details] [Filtration details]

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Alignment and filtration statistics:

Overall family sequences Sequences used for alignment (w/o splice) Sequences kept after filtration [min; median; max] ~average sequence length Alignment length Masked alignment length
102 79 (77%) 79 (77%) [47; 581; 742] ~486 479 479