Family GPV1_18_1


Family ID
See at level 2 [OBSOLETE]
GPV1_18_1 OBSOLETE  add to my list
Family name See at level 2
Creation date (last update: 2014-05-27 10:52:55)
Level 1
Owner greenphyl_v1
Evidence N/A
Access public - read only
Family description / comments contain retrotransposons
Sequences 191




Level Family ID (number of sequences)
1 GPV1_18_1 (191)
2 GPV1_1_2 (140) GPV1_47_2 (38)
Unknown function DUF635 family [OBSOLETE]
GPV1_78_2 (17) GPV1_135_2 (28)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_575_2 (13)
Phospholipase A2 family [OBSOLETE]
GPV1_730_2 (13)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_1299_2 (9)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_1436_2 (8)
Expressed or hypothetical protein group [OBSOLETE]
GPV1_1714_2 (7)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_1850_2 (5)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_2112_2 (5)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_2214_2 (6)
Only ARATH [Automatic annotation] [OBSOLETE]
GPV1_3236_2 (4)
Only ARATH [Automatic annotation] [OBSOLETE]
GPV1_3477_2 (4)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_3601_2 (4)
Only ARATH [Automatic annotation] [OBSOLETE]
GPV1_4190_2 (3)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_5081_2 (3)
Only ARATH [Automatic annotation] [OBSOLETE]
GPV1_5260_2 (3)
3 GPV1_1_3 (161) GPV1_12_3 (573)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_21_3 (87) GPV1_29_3 (19) GPV1_32_3 (58)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_34_3 (99)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_49_3 (4)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_88_3 (54)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_1311_3 (2)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_2054_3 (4)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_3252_3 (3)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_5292_3 (0) GPV1_87_3 (14)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_159_3 (14)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_453_3 (13)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_576_3 (4)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_2670_3 (4) GPV1_73_3 (17) GPV1_1_3 (161)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_498_3 (3)
Only ARATH [Automatic annotation] [OBSOLETE]
GPV1_922_3 (11)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_1092_3 (4)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_1250_3 (2)
Only ARATH [Automatic annotation] [OBSOLETE]
GPV1_4992_3 (3) GPV1_453_3 (13) GPV1_1091_3 (9) GPV1_2634_3 (4)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_1225_3 (9)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_1927_3 (6) GPV1_2395_3 (5)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_1780_3 (5)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_2060_3 (5)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_2673_3 (5)
Only ARATH [Automatic annotation] [OBSOLETE]
GPV1_4382_3 (3)
Only ARATH [Automatic annotation] [OBSOLETE]
GPV1_4832_3 (3) GPV1_159_3 (14)
Only ARATH [Automatic annotation] [OBSOLETE]
GPV1_4248_3 (3)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_5201_3 (3)
Only ARATH [Automatic annotation] [OBSOLETE]
GPV1_5380_3 (3)
4 GPV1_1_4 (107)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_16_4 (94)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_37_4 (84)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_127_4 (40)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_931_4 (3)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_1032_4 (6)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_1351_4 (0)
Disease resistance protein (CC-NBS-LRR class) group1 [OBSOLETE]
GPV1_20_4 (305)
Disease resistance protein (CC-NBS-LRR class) group2 [OBSOLETE]
GPV1_33_4 (212)
Disease resistance protein (CC-NBS-LRR class) group3 [OBSOLETE]
GPV1_166_4 (44)
NB-ARC domain containing group. Only ORYZA [OBSOLETE]
GPV1_394_4 (21)
Disease resistance protein (CC-NBS-LRR class) group4. Only ORYZA [OBSOLETE]
GPV1_2195_4 (5) GPV1_16_4 (94)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_2150_4 (0)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_4016_4 (1)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_32_4 (16)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_49_4 (4)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_1172_4 (4)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_1474_4 (2) GPV1_32_4 (16) GPV1_54_4 (46)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_318_4 (6)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_383_4 (4)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_531_4 (2)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_535_4 (3) GPV1_4711_4 (3) GPV1_37_4 (84)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_2094_4 (6)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_2551_4 (6) GPV1_32_4 (16) GPV1_49_4 (4)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_61_4 (58)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_2751_4 (2)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_3684_4 (0)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_3220_4 (3)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_3184_4 (3) GPV1_1351_4 (0) GPV1_92_4 (12)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_376_4 (6)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_156_4 (13) GPV1_92_4 (12)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_651_4 (10) GPV1_376_4 (6)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_3498_4 (4) GPV1_75_4 (17) GPV1_1_4 (107) GPV1_16_4 (94) GPV1_37_4 (84) GPV1_127_4 (40) GPV1_931_4 (3) GPV1_1032_4 (6) GPV1_1351_4 (0)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_485_4 (3)
Only ARATH [Automatic annotation] [OBSOLETE]
GPV1_1506_4 (7)
Only ARATH [Automatic annotation] [OBSOLETE]
GPV1_3622_4 (4)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_1346_4 (4)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_1369_4 (2) GPV1_1369_4 (2)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_4639_4 (0)
Only ARATH [Automatic annotation] [OBSOLETE]
GPV1_5050_4 (3) GPV1_92_4 (12) GPV1_651_4 (10) GPV1_1395_4 (7) GPV1_2573_4 (4)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_1331_4 (8)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_3518_4 (4) GPV1_2320_4 (5)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_2073_4 (4)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_1988_4 (5)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_2614_4 (5)
Only ARATH [Automatic annotation] [OBSOLETE]
GPV1_4873_4 (3) GPV1_156_4 (13)
Only ARATH [Automatic annotation] [OBSOLETE]
GPV1_4239_4 (3)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_5270_4 (3)
Only ARATH [Automatic annotation] [OBSOLETE]
GPV1_5444_4 (3)
Table 1: This table displays which relationship has the selected custom family with other families.






Sequence total: 191
Species Count (w/o splice) Count (w/ splice)
120 126
63 65


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