Family GP001518_V3


Family ID
Aromatic amino acid beta-eliminating lyase/threonine aldolase family (plant-specificity: 9%) [OBSOLETE]
GP001518_V3 OBSOLETE  add to my list
Family name Aromatic amino acid beta-eliminating lyase/threonine aldolase family
Creation date (last update: 2016-09-27 12:23:30)
Level 1
Type family
Owner greenphyl_v3
Evidence IEA:InterPro
Access public - read only
Family description / comments
Sequences 90
Associated GPv4 family
Aromatic amino acid beta-eliminating lyase/threonine aldolase family
GP001518




Level Family ID (number of sequences)
1 GP001518_V3 (90)
2 GP016959_V3 (79)
(plant-specificity: 100%) [OBSOLETE]
GP026391_V3 (6) GP032066_V3 (3) GP039218_V3 (2)
3
(plant-specificity: 16%) [OBSOLETE]
GP041742_V3 (74)
(plant-specificity: 19%) [OBSOLETE]
GP053846_V3 (5)
(plant-specificity: 100%) [OBSOLETE]
GP052716_V3 (6) GP060048_V3 (3) GP068736_V3 (2)
4
(plant-specificity: 16%) [OBSOLETE]
GP071155_V3 (74)
(plant-specificity: 19%) [OBSOLETE]
GP085227_V3 (5)
(plant-specificity: 100%) [OBSOLETE]
GP083743_V3 (6) GP092919_V3 (3) GP103627_V3 (2)
Table 1: This table displays which relationship has the selected custom family with other families.






Sequence total: 90
Species Count (w/o splice) Count (w/ splice)
1 1
1 1
1 1
1 1
1 1
2 2
2 3
1 1
15 29
4 5
1 1
2 2
1 1
2 2
2 2
1 1
4 4
4 20
1 1
1 5
3 6


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[Masking step 1 details] [Masking step 2 details] [Filtration details]

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Alignment and filtration statistics:

Overall family sequences Sequences used for alignment (w/o splice) Sequences kept after filtration [min; median; max] ~average sequence length Alignment length Masked alignment length
90 51 (57%) 51 (57%) [48; 357; 491] ~315 272 272