Family GP001677_V3


Family ID
Expressed or hypothetical protein group (plant-specificity: 100%) [OBSOLETE]
GP001677_V3 OBSOLETE  add to my list
Family name Expressed or hypothetical protein group
Creation date (last update: 2016-09-27 12:25:45)
Level 1
Type group
Owner greenphyl_v3
Evidence N/A
Access public - read only
Family description / comments
Sequences 79
Associated GPv4 family
Expressed or hypothetical protein group (plant-specificity: 30%)
GP001677




Level Family ID (number of sequences)
1 GP001677_V3 (79)
2
(plant-specificity: 100%) [OBSOLETE]
GP016963_V3 (79)
3
(plant-specificity: 100%) [OBSOLETE]
GP041605_V3 (79)
4
(plant-specificity: 100%) [OBSOLETE]
GP070993_V3 (79)
Table 1: This table displays which relationship has the selected custom family with other families.






Sequence total: 79
Species Count (w/o splice) Count (w/ splice)
1 1
1 1
2 2
4 4
3 3
2 2
2 2
2 6
1 4
2 2
3 3
2 2
2 2
2 2
2 2
2 2
4 4
2 7
18 18
1 1
4 9


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[Masking step 1 details] [Masking step 2 details] [Filtration details]

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Alignment and filtration statistics:

Overall family sequences Sequences used for alignment (w/o splice) Sequences kept after filtration [min; median; max] ~average sequence length Alignment length Masked alignment length
79 62 (78%) 62 (78%) [135; 308; 804] ~308 229 229