Family GP002098_V3


Family ID
Expressed or hypothetical protein group (plant-specificity: 100%) [OBSOLETE]
GP002098_V3 OBSOLETE  add to my list
Family name Expressed or hypothetical protein group
Creation date (last update: 2016-09-27 12:31:33)
Level 1
Type group
Owner greenphyl_v3
Evidence N/A
Access public - read only
Family description / comments
Sequences 61
Associated GPv4 family
Expressed or hypothetical protein group (plant-specificity: 100%)
GP002098




Level Family ID (number of sequences)
1 GP002098_V3 (61)
2
(plant-specificity: 100%) [OBSOLETE]
GP017830_V3 (56)
(plant-specificity: 100%) [OBSOLETE]
GP026747_V3 (5)
3
(plant-specificity: 100%) [OBSOLETE]
GP042715_V3 (52) GP054616_V3 (4)
(plant-specificity: 100%) [OBSOLETE]
GP053195_V3 (5)
4
(plant-specificity: 100%) [OBSOLETE]
GP072192_V3 (52) GP086333_V3 (4)
(plant-specificity: 100%) [OBSOLETE]
GP084479_V3 (5)
Table 1: This table displays which relationship has the selected custom family with other families.






Sequence total: 61
Species Count (w/o splice) Count (w/ splice)
5 5
4 4
4 4
4 4
7 7
4 4
2 2
2 2
2 2
2 2
4 4
2 2
4 4
3 3
4 4
1 1
7 7


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[Masking step 1 details] [Masking step 2 details] [Filtration details]

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Alignment and filtration statistics:

Overall family sequences Sequences used for alignment (w/o splice) Sequences kept after filtration [min; median; max] ~average sequence length Alignment length Masked alignment length
61 61 (100%) 61 (100%) [128; 352; 402] ~338 302 302