Family GP002512_V3


Family ID
Expressed or hypothetical protein group (plant-specificity: 100%) [OBSOLETE]
GP002512_V3 OBSOLETE  add to my list
Family name Expressed or hypothetical protein group
Creation date (last update: 2016-09-27 12:36:57)
Level 1
Type group
Owner greenphyl_v3
Evidence N/A
Access public - read only
Family description / comments
Sequences 48
Associated GPv4 family
Expressed or hypothetical protein group (plant-specificity: 100%)
GP002512




Level Family ID (number of sequences)
1 GP002512_V3 (48)
2
(plant-specificity: 100%) [OBSOLETE]
GP019115_V3 (40)
(plant-specificity: 100%) [OBSOLETE]
GP026975_V3 (5) GP029579_V3 (3)
3
(plant-specificity: 100%) [OBSOLETE]
GP045403_V3 (32)
(plant-specificity: 100%) [OBSOLETE]
GP050657_V3 (8)
(plant-specificity: 100%) [OBSOLETE]
GP053490_V3 (5) GP056935_V3 (3)
4
(plant-specificity: 100%) [OBSOLETE]
GP077152_V3 (23)
(plant-specificity: 100%) [OBSOLETE]
GP078970_V3 (14) GP078970_V3 (14) GP089619_V3 (3)
(plant-specificity: 100%) [OBSOLETE]
GP084848_V3 (5) GP089334_V3 (3)
Table 1: This table displays which relationship has the selected custom family with other families.






Sequence total: 48
Species Count (w/o splice) Count (w/ splice)
1 1
1 1
4 4
5 5
4 4
6 6
1 1
2 2
1 1
1 1
2 2
2 2
2 2
2 2
3 3
6 6
5 5


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[Masking step 1 details] [Masking step 2 details] [Filtration details]

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Alignment and filtration statistics:

Overall family sequences Sequences used for alignment (w/o splice) Sequences kept after filtration [min; median; max] ~average sequence length Alignment length Masked alignment length
48 48 (100%) 48 (100%) [72; 149; 203] ~146 92 92