Family GP000427_V3


Family ID
Expressed or hypothetical protein group (plant-specificity: 100%) [OBSOLETE]
GP000427_V3 OBSOLETE  add to my list
Family name Expressed or hypothetical protein group
Creation date (last update: 2016-09-27 12:07:48)
Level 1
Type group
Owner greenphyl_v3
Evidence N/A
Access public - read only
Family description / comments
Sequences 288




Level Family ID (number of sequences)
1 GP000427_V3 (288)
2
(plant-specificity: 100%) [OBSOLETE]
GP015952_V3 (135)
(plant-specificity: 100%) [OBSOLETE]
GP017470_V3 (67)
(plant-specificity: 100%) [OBSOLETE]
GP018738_V3 (48)
(plant-specificity: 97%) [OBSOLETE]
GP022405_V3 (23)
(plant-specificity: 100%) [OBSOLETE]
GP022951_V3 (16)
(plant-specificity: 100%) [OBSOLETE]
GP023082_V3 (21)
(plant-specificity: 100%) [OBSOLETE]
GP023665_V3 (14)
(plant-specificity: 100%) [OBSOLETE]
GP025115_V3 (8) GP031585_V3 (3)
3
(plant-specificity: 98%) [OBSOLETE]
GP041310_V3 (90)
(plant-specificity: 100%) [OBSOLETE]
GP050081_V3 (10)
(plant-specificity: 100%) [OBSOLETE]
GP051040_V3 (8)
(plant-specificity: 100%) [OBSOLETE]
GP053919_V3 (5) GP059200_V3 (3) GP059404_V3 (3) GP066265_V3 (2) GP066435_V3 (2) GP066449_V3 (2) GP066495_V3 (2) GP066496_V3 (2) GP066516_V3 (2) GP066517_V3 (2) GP066550_V3 (2) GP066611_V3 (2) GP066700_V3 (2)
(plant-specificity: 100%) [OBSOLETE]
GP044025_V3 (40)
(plant-specificity: 77%) [OBSOLETE]
GP051693_V3 (7) GP053919_V3 (5) GP056045_V3 (4) GP059200_V3 (3) GP059418_V3 (3) GP066420_V3 (2) GP066449_V3 (2) GP066450_V3 (2) GP066859_V3 (2)
(plant-specificity: 100%) [OBSOLETE]
GP043380_V3 (45) GP059165_V3 (3)
(plant-specificity: 98%) [OBSOLETE]
GP049417_V3 (12)
(plant-specificity: 96%) [OBSOLETE]
GP053880_V3 (5)
(plant-specificity: 96%) [OBSOLETE]
GP053881_V3 (5)
(plant-specificity: 100%) [OBSOLETE]
GP048744_V3 (15) GP066496_V3 (2)
(plant-specificity: 99%) [OBSOLETE]
GP049172_V3 (13) GP051040_V3 (8) GP059200_V3 (3)
(plant-specificity: 100%) [OBSOLETE]
GP049173_V3 (13)
(plant-specificity: 100%) [OBSOLETE]
GP051045_V3 (8) GP059481_V3 (3)
4
(plant-specificity: 100%) [OBSOLETE]
GP072068_V3 (55)
(plant-specificity: 100%) [OBSOLETE]
GP076636_V3 (26)
(plant-specificity: 100%) [OBSOLETE]
GP081630_V3 (8)
(plant-specificity: 100%) [OBSOLETE]
GP081651_V3 (8) GP092098_V3 (3) GP092105_V3 (3) GP100773_V3 (2) GP101007_V3 (2) GP101060_V3 (2) GP101089_V3 (2) GP101283_V3 (2) GP081651_V3 (8)
(plant-specificity: 100%) [OBSOLETE]
GP085323_V3 (5) GP101024_V3 (2) GP087914_V3 (4) GP092105_V3 (3)
(plant-specificity: 96%) [OBSOLETE]
GP085268_V3 (5) GP100774_V3 (2) GP092213_V3 (3) GP092103_V3 (3) GP092098_V3 (3) GP092103_V3 (3) GP101024_V3 (2) GP101081_V3 (2) GP101082_V3 (2) GP101114_V3 (2) GP101115_V3 (2) GP101159_V3 (2) GP101234_V3 (2) GP101257_V3 (2) GP076636_V3 (26)
(plant-specificity: 80%) [OBSOLETE]
GP081652_V3 (8) GP088017_V3 (4) GP092290_V3 (3) GP100989_V3 (2) GP101389_V3 (2) GP081652_V3 (8) GP087914_V3 (4) GP092105_V3 (3) GP087974_V3 (4) GP085268_V3 (5) GP100774_V3 (2) GP092226_V3 (3) GP092103_V3 (3) GP101024_V3 (2) GP101022_V3 (2) GP101530_V3 (2)
(plant-specificity: 100%) [OBSOLETE]
GP073714_V3 (39)
(plant-specificity: 100%) [OBSOLETE]
GP082012_V3 (7) GP091959_V3 (3)
(plant-specificity: 100%) [OBSOLETE]
GP082503_V3 (7)
(plant-specificity: 100%) [OBSOLETE]
GP085269_V3 (5)
(plant-specificity: 97%) [OBSOLETE]
GP082478_V3 (7) GP082478_V3 (7) GP085268_V3 (5)
(plant-specificity: 100%) [OBSOLETE]
GP078855_V3 (15) GP101082_V3 (2)
(plant-specificity: 100%) [OBSOLETE]
GP080993_V3 (9) GP082478_V3 (7) GP082503_V3 (7) GP101256_V3 (2) GP085323_V3 (5) GP101024_V3 (2) GP085268_V3 (5) GP100774_V3 (2)
(plant-specificity: 100%) [OBSOLETE]
GP080064_V3 (11) GP100697_V3 (2)
(plant-specificity: 100%) [OBSOLETE]
GP085329_V3 (5) GP092126_V3 (3) GP092292_V3 (3)
Table 1: This table displays which relationship has the selected custom family with other families.






Sequence total: 288
Species Count (w/o splice) Count (w/ splice)
288 288


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[Masking step 1 details] [Masking step 2 details] [Filtration details]

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Alignment and filtration statistics:

Overall family sequences Sequences used for alignment (w/o splice) Sequences kept after filtration [min; median; max] ~average sequence length Alignment length Masked alignment length
288 288 (100%) 288 (100%) [101; 255; 954] ~334 1034 1034