Family GP004604_V3


Family ID
Cereal seed allergen/grain softness/trypsin and alpha-amylase inhibitor Family (plant-specificity: 100%) [OBSOLETE]
GP004604_V3 OBSOLETE  add to my list
Family name Cereal seed allergen/grain softness/trypsin and alpha-amylase inhibitor Family
Creation date (last update: 2016-09-27 13:03:22)
Level 1
Type family
Owner greenphyl_v3
Evidence IEA:UniProtKB
Access public - read only
Family description / comments
Sequences 24
Associated GPv4 family
Cereal seed allergen/grain softness/trypsin and alpha-amylase inhibitor Family (plant-specificity: 100%)
GP004604




Level Family ID (number of sequences)
1 GP004604_V3 (24)
2
(plant-specificity: 100%) [OBSOLETE]
GP023625_V3 (13)
Cereal allergen/alpha-amylase inhibitor, rice-type subfamily (plant-specificity: 100%) [OBSOLETE]
GP024915_V3 (8) GP029651_V3 (3)
3
(plant-specificity: 100%) [OBSOLETE]
GP049942_V3 (10) GP057172_V3 (3)
(plant-specificity: 100%) [OBSOLETE]
GP050803_V3 (8) GP057031_V3 (3)
4
(plant-specificity: 100%) [OBSOLETE]
GP082138_V3 (7) GP089660_V3 (3) GP089659_V3 (3)
(plant-specificity: 100%) [OBSOLETE]
GP081408_V3 (8) GP089440_V3 (3)
Table 1: This table displays which relationship has the selected custom family with other families.






Sequence total: 24
Species Count (w/o splice) Count (w/ splice)
11 12
3 3
2 2
7 7


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Alignment and filtration statistics:

Overall family sequences Sequences used for alignment (w/o splice) Sequences kept after filtration [min; median; max] ~average sequence length Alignment length Masked alignment length
24 23 (96%) 23 (96%) [101; 156; 635] ~184 100 100