Family GP000537_V3


Family ID
Cysteine protease inhibitor family / cystatin (plant-specificity: 80%) [OBSOLETE]
GP000537_V3 OBSOLETE  add to my list
Family name Cysteine protease inhibitor family / cystatin
Creation date (last update: 2016-09-27 12:09:24)
Level 1
Type family
Owner greenphyl_v3
Evidence IEA:UniProtKB
Access public - read only
Family description / comments
Sequences 247




Level Family ID (number of sequences)
1 GP000537_V3 (247)
2
(plant-specificity: 79%) [OBSOLETE]
GP016286_V3 (112)
(plant-specificity: 88%) [OBSOLETE]
GP016701_V3 (89)
(plant-specificity: 99%) [OBSOLETE]
GP021767_V3 (25)
(plant-specificity: 100%) [OBSOLETE]
GP024217_V3 (10)
(plant-specificity: 100%) [OBSOLETE]
GP026099_V3 (6)
(plant-specificity: 100%) [OBSOLETE]
GP026609_V3 (5)
3
(plant-specificity: 79%) [OBSOLETE]
GP040914_V3 (112)
(plant-specificity: 88%) [OBSOLETE]
GP041379_V3 (89)
(plant-specificity: 99%) [OBSOLETE]
GP046883_V3 (25)
(plant-specificity: 100%) [OBSOLETE]
GP049883_V3 (10) GP057913_V3 (3) GP058053_V3 (3)
(plant-specificity: 100%) [OBSOLETE]
GP051175_V3 (5)
4
(plant-specificity: 79%) [OBSOLETE]
GP070316_V3 (112)
(plant-specificity: 70%) [OBSOLETE]
GP071088_V3 (76)
(plant-specificity: 98%) [OBSOLETE]
GP081250_V3 (8) GP093836_V3 (2) GP093992_V3 (2) GP094470_V3 (2)
(plant-specificity: 99%) [OBSOLETE]
GP076667_V3 (25)
(plant-specificity: 100%) [OBSOLETE]
GP080250_V3 (10) GP090546_V3 (3) GP090714_V3 (3) GP071088_V3 (76) GP086271_V3 (4)
Table 1: This table displays which relationship has the selected custom family with other families.






Sequence total: 247
Species Count (w/o splice) Count (w/ splice)
5 5
3 3
9 9
5 5
12 17
24 28
13 23
15 16
4 4
7 7
9 9
6 6
11 11
5 5
11 11
13 13
29 29
24 25
19 21


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Download alignment file (filtered):[ FASTA ]


[Masking step 1 details] [Masking step 2 details] [Filtration details]

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Alignment and filtration statistics:

Overall family sequences Sequences used for alignment (w/o splice) Sequences kept after filtration [min; median; max] ~average sequence length Alignment length Masked alignment length
247 224 (91%) 224 (91%) [55; 127; 265] ~142 46 46