Family GP000537_V3
Family ID |
Cysteine protease inhibitor family / cystatin (plant-specificity: 80%) [OBSOLETE]
GP000537_V3 OBSOLETE
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|
---|---|
Family name | Cysteine protease inhibitor family / cystatin |
Creation date | (last update: 2016-09-27 12:09:24) |
Level | 1 |
Type | family |
Owner | greenphyl_v3 |
Evidence | IEA:UniProtKB |
Access | public - read only |
Family description / comments | |
Sequences | 247 |
Level | Family ID (number of sequences) |
---|---|
1 | GP000537_V3 (247) |
2 |
(plant-specificity: 79%) [OBSOLETE]
GP016286_V3
(112)
(plant-specificity: 88%) [OBSOLETE]
GP016701_V3
(89)
(plant-specificity: 99%) [OBSOLETE]
GP021767_V3
(25)
(plant-specificity: 100%) [OBSOLETE]
GP024217_V3
(10)
(plant-specificity: 100%) [OBSOLETE]
GP026099_V3
(6)
(plant-specificity: 100%) [OBSOLETE]
GP026609_V3
(5)
|
3 |
(plant-specificity: 79%) [OBSOLETE]
GP040914_V3
(112)
(plant-specificity: 88%) [OBSOLETE]
GP041379_V3
(89)
(plant-specificity: 99%) [OBSOLETE]
GP046883_V3
(25)
(plant-specificity: 100%) [OBSOLETE]
GP049883_V3
(10)
GP057913_V3
(3)
GP058053_V3
(3)
(plant-specificity: 100%) [OBSOLETE]
GP051175_V3
(5)
|
4 |
(plant-specificity: 79%) [OBSOLETE]
GP070316_V3
(112)
(plant-specificity: 70%) [OBSOLETE]
GP071088_V3
(76)
(plant-specificity: 98%) [OBSOLETE]
GP081250_V3
(8)
GP093836_V3
(2)
GP093992_V3
(2)
GP094470_V3
(2)
(plant-specificity: 99%) [OBSOLETE]
GP076667_V3
(25)
(plant-specificity: 100%) [OBSOLETE]
GP080250_V3
(10)
GP090546_V3
(3)
GP090714_V3
(3)
GP071088_V3
(76)
GP086271_V3
(4)
|
Table 1:
This table displays which relationship has the selected custom family with other
families.
(click on chart bars above to get species proteins)
(click on the button above to get your protein list)
Download alignment file (filtered):[ FASTA ]
[Masking step 1 details] [Masking step 2 details] [Filtration details]
You can filter species displayed in the phylogenomic tree by checking the species you want:
Alignment and filtration statistics:
Overall family sequences | Sequences used for alignment (w/o splice) | Sequences kept after filtration | [min; median; max] ~average sequence length | Alignment length | Masked alignment length |
---|---|---|---|---|---|
247 | 224 (91%) | 224 (91%) | [55; 127; 265] ~142 | 46 | 46 |