Family GP000673_V3


Family ID
11-S Plant Seed Storage Family (plant-specificity: 100%) [OBSOLETE]
GP000673_V3 OBSOLETE  add to my list
Family name 11-S Plant Seed Storage Family
Creation date (last update: 2016-09-27 12:11:17)
Level 1
Type family
Owner greenphyl_v3
Evidence IEA:UniProtKB
Access public - read only
Family description / comments
Sequences 208
Associated GPv4 family
11-S Plant Seed Storage Family (plant-specificity: 100%)
GP000673




Level Family ID (number of sequences)
1 GP000673_V3 (208)
2
Cupin subfamily 1: Glutelin,cruciferin. (plant-specificity: 100%) [OBSOLETE]
GP016309_V3 (111)
(plant-specificity: 98%) [OBSOLETE]
GP016520_V3 (97)
3
(plant-specificity: 100%) [OBSOLETE]
GP040920_V3 (111)
(plant-specificity: 98%) [OBSOLETE]
GP041156_V3 (97)
4
(plant-specificity: 100%) [OBSOLETE]
GP070323_V3 (111)
(plant-specificity: 98%) [OBSOLETE]
GP070568_V3 (96)
Table 1: This table displays which relationship has the selected custom family with other families.






Sequence total: 208
Species Count (w/o splice) Count (w/ splice)
10 10
8 8
3 3
20 23
11 13
5 7
4 4
18 18
6 6
5 5
4 4
13 16
20 20
15 15
11 11
15 15
10 14
13 16


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Alignment and filtration statistics:

Overall family sequences Sequences used for alignment (w/o splice) Sequences kept after filtration [min; median; max] ~average sequence length Alignment length Masked alignment length
208 191 (92%) 191 (92%) [52; 362; 584] ~367 311 311