Family GP000708_V3


Family ID
Expressed or hypothetical protein group (plant-specificity: 99%) [OBSOLETE]
GP000708_V3 OBSOLETE  add to my list
Family name Expressed or hypothetical protein group
Creation date (last update: 2016-09-27 12:11:44)
Level 1
Type group
Owner greenphyl_v3
Evidence N/A
Access public - read only
Family description / comments
Sequences 200
Associated GPv4 family
Expressed or hypothetical protein group (plant-specificity: 100%)
GP000708




Level Family ID (number of sequences)
1 GP000708_V3 (200)
2
(plant-specificity: 100%) [OBSOLETE]
GP016368_V3 (106)
(plant-specificity: 100%) [OBSOLETE]
GP020750_V3 (32)
(plant-specificity: 100%) [OBSOLETE]
GP022544_V3 (21)
(plant-specificity: 100%) [OBSOLETE]
GP023858_V3 (12)
(plant-specificity: 60%) [OBSOLETE]
GP024093_V3 (14)
(plant-specificity: 100%) [OBSOLETE]
GP026166_V3 (6)
(plant-specificity: 100%) [OBSOLETE]
GP027163_V3 (5) GP034061_V3 (2) GP035289_V3 (2)
3
(plant-specificity: 100%) [OBSOLETE]
GP041054_V3 (103) GP058377_V3 (3)
(plant-specificity: 100%) [OBSOLETE]
GP046209_V3 (29) GP058305_V3 (3)
(plant-specificity: 100%) [OBSOLETE]
GP047784_V3 (21)
(plant-specificity: 100%) [OBSOLETE]
GP049393_V3 (12)
(plant-specificity: 60%) [OBSOLETE]
GP049703_V3 (11) GP058414_V3 (3)
(plant-specificity: 100%) [OBSOLETE]
GP052462_V3 (6)
(plant-specificity: 100%) [OBSOLETE]
GP051934_V3 (6) GP064143_V3 (2) GP064515_V3 (2) GP062690_V3 (2) GP064180_V3 (2)
4
(plant-specificity: 100%) [OBSOLETE]
GP070815_V3 (85) GP087454_V3 (4) GP087455_V3 (4) GP091044_V3 (3) GP098242_V3 (2) GP098399_V3 (2) GP087454_V3 (4)
(plant-specificity: 100%) [OBSOLETE]
GP076373_V3 (27) GP091044_V3 (3)
(plant-specificity: 100%) [OBSOLETE]
GP078643_V3 (16) GP091049_V3 (3)
(plant-specificity: 100%) [OBSOLETE]
GP080028_V3 (11) GP098139_V3 (2)
(plant-specificity: 60%) [OBSOLETE]
GP080021_V3 (11) GP091140_V3 (3)
(plant-specificity: 100%) [OBSOLETE]
GP083490_V3 (6)
(plant-specificity: 100%) [OBSOLETE]
GP082872_V3 (6) GP098379_V3 (2) GP098794_V3 (2) GP096610_V3 (2) GP098430_V3 (2)
Table 1: This table displays which relationship has the selected custom family with other families.






Sequence total: 200
Species Count (w/o splice) Count (w/ splice)
198 198
2 2


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[Masking step 1 details] [Masking step 2 details] [Filtration details]

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Alignment and filtration statistics:

Overall family sequences Sequences used for alignment (w/o splice) Sequences kept after filtration [min; median; max] ~average sequence length Alignment length Masked alignment length
200 200 (100%) 200 (100%) [51; 116; 702] ~118 61 61