Validated Families


Number of clusters: 2950

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  Family Id Family Name Number of sequences Status Analyzes
RING-type E3 ubiquitin ligases family (plant-specificity: 55%)
GP000547
RING-type E3 ubiquitin ligases family 513 Phylogeny done
Valyl/leucyl/isoleucyl-trna synthetase, class i, anticodon-binding superfamily
GP000608
Valyl/leucyl/isoleucyl-trna synthetase, class i, anticodon-binding superfamily 509 Did not pass filtration
2-oxoacid dehydrogenase acyltransferase superfamily
GP000446
2-oxoacid dehydrogenase acyltransferase superfamily 511 Did not pass filtration
Beta-fructofuranosidase family
GP000642
Beta-fructofuranosidase family 505 Did not pass filtration
Purine permease family (plant-specificity: 90%)
GP000356
Purine permease family 509 Phylogeny done
S-ribonuclease binding protein, SBP1, pollen family (plant-specificity: 90%)
GP000483
S-ribonuclease binding protein, SBP1, pollen family 504 Phylogeny done
Cation/H+ exchanger superfamily
GP000438
Cation/H+ exchanger superfamily 549 Did not pass filtration
Malate dehydrogenase family (plant-specificity: 9%)
GP000552
Malate dehydrogenase family 497 Did not pass filtration
Target of Myb protein 1 family (plant-specificity: 9%)
GP000496
Target of Myb protein 1 family 503 Did not pass filtration
Serine/glycine hydroxymethyltransferase family
GP000615
Serine/glycine hydroxymethyltransferase family 496 Did not pass filtration
Phytochelatin synthetase like conserved region family (plant-specificity: 90%)
GP000538
Phytochelatin synthetase like conserved region family 545 Did not pass filtration
TRNA delta(2) isopentenylpyrophosphate transferase family (plant-specificity: 9%)
GP000663
TRNA delta(2) isopentenylpyrophosphate transferase family 421 Did not pass filtration
Phosphate-responsive 1 family (plant-specificity: 76%)
GP000404
Phosphate-responsive 1 family 492 Phylogeny done
Translation initiation factor eIF-5A family (plant-specificity: 19%)
GP000887
Translation initiation factor eIF-5A family 483 Phylogeny done
TCP transcription factor family (plant-specificity: 100%)
GP000476
TCP transcription factor family 483 Phylogeny done
Glycosyl hydrolases 36 family
GP000369
Glycosyl hydrolases 36 family 475 Did not pass filtration
Transcription factor IIB (TFIIB) family (plant-specificity: 19%)
GP000903
Transcription factor IIB (TFIIB) family 474 Did not pass filtration
Auxin efflux carrier family
GP000355
Auxin efflux carrier family 476 Did not pass filtration
yippee-like family (plant-specificity: 9%)
GP000715
yippee-like family 502 Phylogeny done
ALFIN transcription factor family (plant-specificity: 100%)
GP000516
ALFIN transcription factor family 468 Phylogeny done
Thiamine pyrophosphate enzyme superfamily (plant-specificity: 50%)
GP000499
Thiamine pyrophosphate enzyme superfamily 469 Did not pass filtration
Polyprenyl synthetase family
GP000470
Polyprenyl synthetase family 471 Phylogeny done
Unknown function DUF1685 family (plant-specificity: 98%)
GP000724
Unknown function DUF1685 family 470 Phylogeny done
Ribonuclease ii and r family (plant-specificity: 40%)
GP000883
Ribonuclease ii and r family 471 Did not pass filtration
Paired amphipathic helix protein Sin3-like family (plant-specificity: 9%)
GP000650
Paired amphipathic helix protein Sin3-like family 467 Did not pass filtration
Signal recognition particle 54 kda family (plant-specificity: 9%)
GP000583
Signal recognition particle 54 kda family 463 Did not pass filtration
Carbonic anhydrase family
GP000514
Carbonic anhydrase family 456 Phylogeny done
Atpase, f1 complex, epsilon subunit, mitochondrial family (plant-specificity: 19%)
GP003066
Atpase, f1 complex, epsilon subunit, mitochondrial family 456 Did not pass filtration
Metal-dependent amidase/aminoacylase/carboxypeptidase family (plant-specificity: 19%)
GP000609
Metal-dependent amidase/aminoacylase/carboxypeptidase family 444 Did not pass filtration
Histone H2B family (plant-specificity: 9%)
GP000620
Histone H2B family 442 Phylogeny done
12 oxophytodienoic acid reductase family
GP000628
12 oxophytodienoic acid reductase family 444 Did not pass filtration
RNA polymerase sigma factor, plastid SigB/SigC/SigD types family
GP000726
RNA polymerase sigma factor, plastid SigB/SigC/SigD types family 430 Phylogeny done
Trehalose-6-phosphate synthase family
GP000593
Trehalose-6-phosphate synthase family 428 Phylogeny done
Aminotransferase class I/II superfamily (plant-specificity: 9%)
GP000792
Aminotransferase class I/II superfamily 430 Did not pass filtration
RPM1-interacting protein 4 defence response family (plant-specificity: 80%)
GP001250
RPM1-interacting protein 4 defence response family 429 Phylogeny done
Phosphoglycerate kinase family (plant-specificity: 9%)
GP000953
Phosphoglycerate kinase family 423 Did not pass filtration
Caffeoyl-coa o-methyltransferase family (plant-specificity: 9%)
GP000751
Caffeoyl-coa o-methyltransferase family 420 Phylogeny done
Bacterial fmu (sun)/eukaryotic nucleolar nol1/nop2p family
GP004083
Bacterial fmu (sun)/eukaryotic nucleolar nol1/nop2p family 424 Did not pass filtration
Nucleoside phosphatase gda1/cd39 family
GP000630
Nucleoside phosphatase gda1/cd39 family 423 Did not pass filtration
Glycerol-3-phosphate acyltransferase family (plant-specificity: 70%)
GP000633
Glycerol-3-phosphate acyltransferase family 420 Phylogeny done
Glucose-1-phosphate adenylyltransferase (plant-specificity: 9%)
GP012119
Glucose-1-phosphate adenylyltransferase 416 Phylogeny done
Caspase family
GP000701
Caspase family 414 Phylogeny done
Yabby transcription factor family (plant-specificity: 97%)
GP000632
Yabby transcription factor family 413 Phylogeny done
Cytokinin dehydrogenase family (plant-specificity: 9%)
GP000397
Cytokinin dehydrogenase family 413 Did not pass filtration
Acyl carrier protein family (plant-specificity: 19%)
GP001126
Acyl carrier protein family 412 Phylogeny done
Hexokinase family
GP000796
Hexokinase family 407 Did not pass filtration
Calmodulin-binding transcription activator (camta)family (plant-specificity: 96%)
GP000710
Calmodulin-binding transcription activator (camta)family 406 Did not pass filtration
Plant neutral invertase family
GP000693
Plant neutral invertase family 408 Phylogeny done
Wax Synthesis family (plant-specificity: 9%)
GP000765
Wax Synthesis family 406 Did not pass filtration
alcohol oxidase family
GP000713
alcohol oxidase family 397 Did not pass filtration