Validated Families


Number of clusters: 2956

  Family Id Family Name Number of sequences Status Analyzes
Putative rRNA methylase Family (plant-specificity: 30%)
GP003823
Putative rRNA methylase Family 61 Did not pass filtration
Ribosomal protein L37, mitochondrial family (plant-specificity: 9%)
GP003881
Ribosomal protein L37, mitochondrial family 60 Phylogeny done
Unknown function duf1665 family (plant-specificity: 9%)
GP004391
Unknown function duf1665 family 60 Phylogeny done
Zinc finger, Mcm10/DnaG-type domain containing family (plant-specificity: 100%)
GP004194
Zinc finger, Mcm10/DnaG-type domain containing family 60 Phylogeny done
Unknown function duf339 family (plant-specificity: 9%)
GP003506
Unknown function duf339 family 60 Phylogeny done
Unknown function DUF773 family (plant-specificity: 33%)
GP002723
Unknown function DUF773 family 58 Did not pass filtration
Unknown function DUF3119 family
GP003422
Unknown function DUF3119 family 60 Phylogeny done
Arabinogalactan group (plant-specificity: 100%)
GP004950
Arabinogalactan group 60 Phylogeny done
Unknown function DUF1995 family (plant-specificity: 40%)
GP003789
Unknown function DUF1995 family 58 Phylogeny done
Unknown function duf196 family (plant-specificity: 19%)
GP003873
Unknown function duf196 family 59 Did not pass filtration
Phosphorylated adapter RNA export family (plant-specificity: 46%)
GP003745
Phosphorylated adapter RNA export family 59 Phylogeny done
Condensin complex subunit 3 family (plant-specificity: 11%)
GP003947
Condensin complex subunit 3 family 58 Did not pass filtration
Unknown function duf985 family
GP004076
Unknown function duf985 family 59 Phylogeny done
Photosystem II PsbP family (plant-specificity: 98%)
GP003154
Photosystem II PsbP family 59 Phylogeny done
Unknown function upf0029 family (plant-specificity: 11%)
GP003919
Unknown function upf0029 family 59 Phylogeny done
Transcription factor TFIIIC, tau55-related domain containing family (plant-specificity: 100%)
GP004330
Transcription factor TFIIIC, tau55-related domain containing family 59 Phylogeny done
Plastid transcriptionally active 6 homologs family (plant-specificity: 100%)
GP003938
Plastid transcriptionally active 6 homologs family 59 Did not pass filtration
Transcription initiation factor Rrn7 family (plant-specificity: 99%)
GP003995
Transcription initiation factor Rrn7 family 57 Did not pass filtration
Rubredoxin family
GP003412
Rubredoxin family 58 Phylogeny done
Unknown function DUF3054 family
GP003939
Unknown function DUF3054 family 58 Phylogeny done
Uncharacterised Ycf55 family (plant-specificity: 95%)
GP003817
Uncharacterised Ycf55 family 57 Did not pass filtration
Nuclear fragile X mental retardation-interacting protein 1 ((Nufip1) homologs family (plant-specificity: 100%)
GP004175
Nuclear fragile X mental retardation-interacting protein 1 ((Nufip1) homologs family 57 Phylogeny done
Unknown function duf577 family (plant-specificity: 50%)
GP003177
Unknown function duf577 family 58 Did not pass filtration
Methyltransferase family
GP003910
Methyltransferase family 58 Phylogeny done
TLD family
GP003487
TLD family 57 Phylogeny done
Vacuolar ATPase assembly integral membrane protein VMA21-like domain containing family (plant-specificity: 98%)
GP003963
Vacuolar ATPase assembly integral membrane protein VMA21-like domain containing family 57 Phylogeny done
Unknown function duf408 family (plant-specificity: 80%)
GP003702
Unknown function duf408 family 56 Phylogeny done
Unknown function DUF2232 family
GP004077
Unknown function DUF2232 family 58 Phylogeny done
NnrU (plant-specificity: 9%)
GP011902
NnrU 57 Phylogeny done
Unknown function DUF2048 family
GP003645
Unknown function DUF2048 family 57 Phylogeny done
DNA-directed RNA polymerase III, subunit Rpc31 (plant-specificity: 100%)
GP004033
DNA-directed RNA polymerase III, subunit Rpc31 58 Phylogeny done
Cupin, RmlC-type family (plant-specificity: 50%)
GP004346
Cupin, RmlC-type family 56 Did not pass filtration
Unknown function duf171 family
GP004263
Unknown function duf171 family 55 Did not pass filtration
Unknown function duf28 family
GP003630
Unknown function duf28 family 55 Phylogeny done
Unknown function DUF1365 family
GP003956
Unknown function DUF1365 family 55 Did not pass filtration
Alkaline phosphatase D-related family
GP003951
Alkaline phosphatase D-related family 55 Phylogeny done
Defensin-like protein group (plant-specificity: 100%)
GP008042
Defensin-like protein group 52 Phylogeny done
Nucleoporin protein Ndc1-Nup family (plant-specificity: 99%)
GP004185
Nucleoporin protein Ndc1-Nup family 54 Did not pass filtration
Unknown function DUF2419 family (plant-specificity: 9%)
GP004677
Unknown function DUF2419 family 54 Phylogeny done
Unknown function duf423 family (plant-specificity: 9%)
GP003252
Unknown function duf423 family 54 Phylogeny done
Chloroplast sensor kinase CSK homologs family
GP004669
Chloroplast sensor kinase CSK homologs family 54 Did not pass filtration
Condensin-2 complex subunit G2 family (plant-specificity: 19%)
GP004399
Condensin-2 complex subunit G2 family 54 Did not pass filtration
Unknown function upf0066 family (plant-specificity: 9%)
GP003761
Unknown function upf0066 family 54 Did not pass filtration
SPla/RYanodine receptor SPRY family (plant-specificity: 66%)
GP003763
SPla/RYanodine receptor SPRY family 53 Phylogeny done
Unknown function DUF3456 family (plant-specificity: 71%)
GP004435
Unknown function DUF3456 family 52 Phylogeny done
Cytochrome c oxidase assembly protein PET191 domain containing family (plant-specificity: 40%)
GP004594
Cytochrome c oxidase assembly protein PET191 domain containing family 53 Phylogeny done
U3 small nucleolar rna-associated protein 6 domain containing protein family
GP004134
U3 small nucleolar rna-associated protein 6 domain containing protein family 51 Did not pass filtration
Unknown function duf1223 family
GP004248
Unknown function duf1223 family 53 Phylogeny done
Bicoid interacting 3 domain containing family (plant-specificity: 9%)
GP004058
Bicoid interacting 3 domain containing family 53 Phylogeny done
Unknown function DUF3326 family
GP003844
Unknown function DUF3326 family 53 Phylogeny done