Family GP015098


Family ID GP015098  add to my list RDF
Family name Cytochrome P450 86 family   suggest a name
Cross-reference(s) PMID:
CYP86A1 from Arabidopsis thaliana encodes a cytochrome P450-dependent fatty acid omega-hydroxylase.
9500987 PMID:
Localization of CYP86B1 in the outer envelope of chloroplasts.
11522915 PMID:
CYP86B1 is required for very long chain omega-hydroxyacid and alpha, omega -dicarboxylic acid synthesis in root and seed suberin polyester.
19525321
Family Ontology
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molecular_function
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016705 (44%) - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
Curation status ?
Found in Viridiplantae
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
(plant-specificity: 30%)
GP000006 (14140) , GP000125 (1368) ,
Chaperonin Cpn60 Family
GP000441 (571) , GP104386 (164)
2
Cytochrome P450 86 family
GP015098 (1403)
3 GP039842 (1367) , GP043875 (76)
4 GP069501 (1367) , GP073712 (69)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 1403
Species Count (w/o splice) Count (w/ splice)
1 1
12 16
18 18
133 133
17 17
49 49
45 45
36 36
34 34
48 54
35 35
43 43
44 44
38 44
38 39
24 24
46 46
27 27
28 28
34 37
19 19
31 31
43 56
42 42
41 51
26 26
30 30
21 22
68 68
31 31
127 127
23 23
29 29
47 50
28 28


Information to display




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Close InterPro family
IPR Annotation Type % Occurence Specificity
Cytochrome P450
IPR001128
Cytochrome P450 Family 93 (1301) No

Close Other InterPro signatures

No other significant IPR (i.e. > 25%)


Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
Cytochrome P450, E-class, group I
IPR002401 IPR001128



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Species
Information to display
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