Family GP000119


Family ID GP000119  add to my list RDF
Family name Aldehyde dehydrogenase (ALDH) family   suggest a name
Cross-reference(s) PMID:
The ALDH gene superfamily of Arabidopsis.
15358267 PMID:
Detailed expression analysis of selected genes of the aldehyde dehydrogenase(ALDH) gene superfamily in Arabidopsis thaliana.
15830124 PMID:
Non-phosphorylating GAPDH of higher plants is a member of the aldehyde dehydrogenase superfamily with no sequence homology to phosphorylating GAPDH.
7545914
Family Ontology
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molecular_function
aldehyde dehydrogenase [NAD(P)+] activity
GO:0004030 (12%) - aldehyde dehydrogenase [NAD(P)+] activity
succinate-semialdehyde dehydrogenase [NAD(P)+] activity
GO:0009013 (3%) - succinate-semialdehyde dehydrogenase [NAD(P)+] activity
biological_process
cellular aldehyde metabolic process
GO:0006081 (12%) - cellular aldehyde metabolic process
gamma-aminobutyric acid catabolic process
GO:0009450 (3%) - gamma-aminobutyric acid catabolic process
Curation status ?
Found in No specificity
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
Aldehyde dehydrogenase (ALDH) family
GP000119 (1464)
2
NAD-dependent aldehyde dehydrogenase family
GP015240 (1021) ,
Aldehyde dehydrogenase NAD(P)-dependent family
GP016126 (301) ,
(plant-specificity: 75%)
GP019579 (81) ,
(plant-specificity: 96%)
GP021883 (41) , GP111706 (14) , GP037714 (4)
3 GP039952 (908) , GP040745 (301) , GP042116 (113) , GP044637 (81) ,
(plant-specificity: 96%)
GP047010 (41) , GP120485 (14) , GP067072 (4)
4 GP069509 (621) , GP070151 (301) , GP071399 (116) , GP071544 (113) , GP072392 (90) , GP074212 (81) , GP074513 (79) ,
(plant-specificity: 96%)
GP076815 (41) , GP136309 (8) , GP138195 (6) , GP101768 (4)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 1464
Species Count (w/o splice) Count (w/ splice)
5 5
8 8
61 61
27 36
65 65
72 72
12 12
22 22
21 21
32 32
20 20
21 38
19 23
19 19
21 21
25 51
19 25
19 19
23 23
24 24
27 27
15 27
23 23
81 81
27 96
27 27
31 109
47 47
43 43
16 42
64 64
52 52
42 45
25 25
27 29
67 97
33 33


Information to display




(click on chart bars above to get species proteins)


Close InterPro family
IPR Annotation Type % Occurence Specificity
1-pyrroline-5-carboxylate dehydrogenase
IPR005931
1-pyrroline-5-carboxylate dehydrogenase Family 1 (1) Yes
Methylmalonate-semialdehyde dehydrogenase
IPR010061
Methylmalonate-semialdehyde dehydrogenase Family 6 (81) Yes
Succinate semialdehyde dehydrogenase
IPR010102
Succinate semialdehyde dehydrogenase Family 3 (40) Yes
Phenylacetic acid degradation protein PaaN
IPR011966
Phenylacetic acid degradation protein PaaN Family 1 (1) Yes
Aldehyde dehydrogenase NAD(P)-dependent
IPR012394
Aldehyde dehydrogenase NAD(P)-dependent Family 12 (178) Yes
Putative phosphonoacetaldehyde dehydrogenase
IPR017656
Putative phosphonoacetaldehyde dehydrogenase Family 1 (1) Yes
Bifunctional protein PutA
IPR025703
Bifunctional protein PutA Family 1 (1) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Aldehyde dehydrogenase domain
IPR015590
Aldehyde dehydrogenase domain Domain 86 (1261) No
Aldehyde dehydrogenase, conserved site
IPR016160
Aldehyde dehydrogenase, conserved site Conserved_site 62 (902) No
Aldehyde/histidinol dehydrogenase
IPR016161
Aldehyde/histidinol dehydrogenase Domain 89 (1303) No
Aldehyde dehydrogenase, N-terminal
IPR016162
Aldehyde dehydrogenase, N-terminal Domain 82 (1194) No
Aldehyde dehydrogenase, C-terminal
IPR016163
Aldehyde dehydrogenase, C-terminal Domain 78 (1148) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR016163 IPR015590 IPR016161 IPR016162 IPR016160


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Species
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