Family GP015505


Family ID GP015505  add to my list RDF
Family name Ent-kaurene synthase family   suggest a name
Cross-reference(s) PMID:
Functional characterization of the rice kaurene synthase-like gene family.
17141283 PMID:
The Arabidopsis GA1 locus encodes the cyclase ent-kaurene synthetase A of gibberellin biosynthesis.
7994182
Family Ontology
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molecular_function
terpene synthase activity
GO:0010333 (60%) - terpene synthase activity
Curation status ?
Found in Embryophyta
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
Terpene synthase superfamily (plant-specificity: 91%)
GP000072 (1859)
2
Ent-kaurene synthase family
GP015505 (439)
3 GP040534 (431) , GP125724 (4) , GP126046 (4)
4 GP070540 (422) ,
(plant-specificity: 100%)
GP139309 (5) , GP140844 (4) , GP144958 (3) , GP144959 (3)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 439
Species Count (w/o splice) Count (w/ splice)
11 12
20 20
64 64
15 15
13 13
3 3
14 14
23 23
18 27
4 4
9 9
15 15
11 19
6 6
17 17
8 8
8 8
8 8
3 3
11 11
5 5
5 11
7 7
6 10
10 10
13 13
2 5
25 25
8 8
23 23
3 3
3 4
10 11
5 5


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
IPR008930
Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid Domain 75 (330) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR008930
Terpenoid synthase
IPR008949
Terpene synthase, N-terminal domain
IPR001906
Terpene synthase, metal-binding domain
IPR005630



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Species
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