Family GP015638


Family ID GP015638  add to my list RDF
Family name DNA helicase, ATP-dependent, RecQ type family   suggest a name
Cross-reference(s) PMID:
RecQ helicases: at the heart of genetic stability.
12354611
Family Ontology
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molecular_function
ATP-dependent 3'-5' DNA helicase activity
GO:0043140 (25%) - ATP-dependent 3'-5' DNA helicase activity
Curation status ?
Found in No specificity
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
DNA/RNA helicase superfamily
GP000030 (3908)
2
DNA helicase, ATP-dependent, RecQ type family
GP015638 (364)
3 GP040455 (313) , GP047285 (51)
4 GP070588 (168) , GP077125 (51) , GP078207 (50) ,
(plant-specificity: 9%)
GP132525 (49) ,
(plant-specificity: 19%)
GP077124 (44)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 364
Species Count (w/o splice) Count (w/ splice)
3 3
9 9
34 34
7 7
6 6
17 17
6 6
8 8
6 6
7 7
9 9
7 13
8 9
7 7
8 8
6 12
6 6
9 9
8 8
14 14
7 7
7 8
13 13
21 21
6 12
6 6
8 17
7 7
8 8
10 14
2 2
10 10
7 7
6 6
13 20
8 8


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
DNA/RNA helicase, DEAD/DEAH box type, N-terminal
IPR011545
DNA/RNA helicase, DEAD/DEAH box type, N-terminal Domain 71 (260) No
Helicase, superfamily 1/2, ATP-binding domain
IPR014001
Helicase, superfamily 1/2, ATP-binding domain Domain 72 (261) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
Helicase, C-terminal
IPR001650 IPR014001 IPR011545
DNA helicase, ATP-dependent, RecQ type
IPR004589



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Species
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