Family GP000154


Family ID GP000154  add to my list RDF
Family name DHHC palmitoyltransferase family   suggest a name
Curation status ?
Found in No specificity
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
DHHC palmitoyltransferase family (plant-specificity: 40%)
GP000154 (1301)
2 GP015534 (703) , GP015989 (243) , GP108922 (176) ,
(plant-specificity: 99%)
GP020015 (70) , GP021219 (57) ,
(plant-specificity: 50%)
GP021536 (46) , GP117225 (3)
3 GP040206 (420) , GP040632 (243) , GP041807 (175) , GP042073 (137) , GP043341 (88) , GP044971 (70) , GP044593 (57) , GP046288 (57) ,
(plant-specificity: 40%)
GP119519 (26) ,
(plant-specificity: 11%)
GP046623 (20) , GP057732 (4) , GP130355 (3)
4 GP069680 (419) , GP071251 (175) , GP070987 (152) , GP071447 (137) , GP071812 (91) , GP072846 (88) , GP074162 (69) , GP075261 (57) , GP075978 (57) ,
(plant-specificity: 40%)
GP132873 (26) , GP076364 (20) , GP090303 (4) , GP147388 (3)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 1301
Species Count (w/o splice) Count (w/ splice)
6 6
11 11
47 47
24 26
16 16
34 34
20 20
44 44
37 37
34 34
23 23
30 50
27 31
27 27
30 30
36 76
26 28
26 26
24 24
25 25
24 24
23 29
24 24
60 60
34 108
25 25
42 84
24 24
38 38
18 29
39 39
35 35
25 26
23 23
21 26
45 65
27 27


Information to display




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Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Zinc finger, DHHC-type, palmitoyltransferase
IPR001594 		Zinc finger, DHHC-type, palmitoyltransferase Domain 80 (1040) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR001594


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Species
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