Family GP000154


Family ID GP000154  add to my list RDF
Family name DHHC palmitoyltransferase family   suggest a name
Curation status ?
Found in No specificity
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
DHHC palmitoyltransferase family (plant-specificity: 40%)
GP000154 (1301)
2 GP015534 (703) , GP015989 (243) , GP108922 (176) ,
(plant-specificity: 99%)
GP020015 (70) , GP021219 (57) ,
(plant-specificity: 50%)
GP021536 (46) , GP117225 (3)
3 GP040206 (420) , GP040632 (243) , GP041807 (175) , GP042073 (137) , GP043341 (88) , GP044971 (70) , GP044593 (57) , GP046288 (57) ,
(plant-specificity: 40%)
GP119519 (26) ,
(plant-specificity: 11%)
GP046623 (20) , GP057732 (4) , GP130355 (3)
4 GP069680 (419) , GP071251 (175) , GP070987 (152) , GP071447 (137) , GP071812 (91) , GP072846 (88) , GP074162 (69) , GP075261 (57) , GP075978 (57) ,
(plant-specificity: 40%)
GP132873 (26) , GP076364 (20) , GP090303 (4) , GP147388 (3)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 1301
Species Count (w/o splice) Count (w/ splice)
6 6
11 11
47 47
24 26
16 16
34 34
20 20
44 44
37 37
34 34
23 23
30 50
27 31
27 27
30 30
36 76
26 28
26 26
24 24
25 25
24 24
23 29
24 24
60 60
34 108
25 25
42 84
24 24
38 38
18 29
39 39
35 35
25 26
23 23
21 26
45 65
27 27


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Zinc finger, DHHC-type, palmitoyltransferase
IPR001594
Zinc finger, DHHC-type, palmitoyltransferase Domain 80 (1040) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR001594


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Species
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