Family GP015602


Family ID GP015602  add to my list RDF
Family name Unannotated cluster   suggest a name
Curation status ?
Found in Spermatophyta
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
LURP-one-related (LOR) family (plant-specificity: 99%)
GP000174 (735)
2 GP015602 (395)
3 GP041652 (395)
4 GP071487 (319) , GP073576 (66) ,
(plant-specificity: 100%)
GP082931 (10)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 395
Species Count (w/o splice) Count (w/ splice)
33 33
6 6
18 18
18 18
13 13
8 8
16 16
11 11
17 17
23 23
17 17
18 18
7 7
11 11
9 9
7 7
8 11
4 4
8 8
12 12
7 7
15 18
8 8
15 15
6 6
15 15
9 9
12 12
5 5
8 9
15 16
8 8


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
LURP1-like domain
IPR007612
LURP1-like domain Domain 95 (376) No
Tubby C-terminal-like domain
IPR025659
Tubby C-terminal-like domain Domain 95 (376) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR025659 IPR007612


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Species
Information to display
?


(click on the button above to get your protein list)