Family GP015792


Family ID GP015792  add to my list RDF
Family name Peptidase A1 Family 2   suggest a name
Synonym(s) Phytepsin
Cross-reference(s) PMID:
Rice aspartic proteinase, oryzasin, expressed during seed ripening and germination, has a gene organization distinct from those of animal and microbial aspartic proteinases.
7556174
Curation status ?
Found in Viridiplantae
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1 GP104250 (353)
2
Peptidase A1 Family 2
GP015792 (350)
3 GP040448 (350)
4 GP069901 (349)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 350
Species Count (w/o splice) Count (w/ splice)
1 1
17 17
3 4
4 4
11 11
2 2
8 8
8 8
3 3
6 6
8 17
6 9
2 2
6 6
13 24
5 13
4 4
6 6
6 6
8 8
5 7
5 5
28 28
7 26
7 7
7 21
5 5
13 13
3 10
2 2
9 9
7 9
6 6
6 10
18 25
8 8


Information to display




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Close InterPro family
IPR Annotation Type % Occurence Specificity
Peptidase A1
IPR001461
Peptidase A1 Family 92 (321) No

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Peptidase aspartic, active site
IPR001969
Peptidase aspartic, active site Active_site 87 (304) No
Saposin-like type B, 1
IPR007856
Saposin-like type B, 1 Domain 81 (283) No
Saposin-like type B, 2
IPR008138
Saposin-like type B, 2 Domain 80 (280) No
Saposin B
IPR008139
Saposin B Domain 85 (297) No
Saposin-like
IPR011001
Saposin-like Domain 85 (297) No
Aspartic peptidase
IPR021109
Aspartic peptidase Domain 92 (322) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR021109 IPR001461 IPR001969 IPR008139 IPR011001 IPR007856 IPR008138


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Species
Information to display
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