Family GP016054


Family ID GP016054  add to my list RDF
Family name 1,4-alpha-glucan-branching enzyme subfamily   suggest a name
Synonym(s) Q-enzyme
Family Ontology
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molecular_function
1,4-alpha-glucan branching enzyme activity
GO:0003844 (41%) - 1,4-alpha-glucan branching enzyme activity
cation binding
GO:0043169 (45%) - cation binding
Curation status ?
Found in No specificity
Phylogenetic analyzes Did not pass filtration




Clustering level Family ID (number of sequences)
1
Glycoside hydrolase family 13
GP000936 (617)
2
1,4-alpha-glucan-branching enzyme subfamily
GP016054 (331)
3 GP040685 (331)
4 GP070119 (331)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 331
Species Count (w/o splice) Count (w/ splice)
1 1
4 4
34 34
5 7
4 4
15 15
3 3
9 9
12 12
8 8
7 7
4 14
4 7
3 3
5 5
5 7
5 5
4 4
2 2
3 3
3 3
3 5
4 4
8 8
23 70
3 3
4 15
3 3
15 15
5 8
11 11
7 7
5 5
4 4
3 3
7 9
4 4


Information to display




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Close InterPro family
IPR Annotation Type % Occurence Specificity
1,4-alpha-glucan-branching enzyme
IPR006407
1,4-alpha-glucan-branching enzyme Family 41 (137) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Glycoside hydrolase, catalytic domain
IPR013781
Glycoside hydrolase, catalytic domain Domain 74 (246) No
Glycoside hydrolase, superfamily
IPR017853
Glycoside hydrolase, superfamily Domain 75 (249) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
Immunoglobulin E-set
IPR014756
Immunoglobulin-like fold
IPR013783 IPR013781 IPR017853
Glycosyl hydrolase, family 13, catalytic domain
IPR006047 IPR006407
Glycoside hydrolase, family 13, N-terminal
IPR004193
Alpha-amylase, C-terminal all beta
IPR006048
Glycosyl hydrolase, family 13, all-beta
IPR013780



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Species
Information to display
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Alignment not available.
[Masking step 1 details] [Masking step 2 details] [Filtration details] [Global HMM file]

Phylogeny tree not available.