Family GP016924


Family ID GP016924  add to my list RDF
Family name Ankyrin repeat group4   suggest a name
Family Ontology
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N/A
Curation status ?
Found in No specificity
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
Ankyrin repeat superfamily (plant-specificity: 19%)
GP000082 (3276)
2
Ankyrin repeat group4
GP016924 (308)
3 GP041563 (247) , GP046898 (55) ,
(plant-specificity: 40%)
GP124718 (5) , GP128245 (3)
4 GP070988 (183) , GP073638 (61) , GP076684 (55) ,
(plant-specificity: 40%)
GP139651 (5) , GP144446 (3) , GP144700 (3)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 308
Species Count (w/o splice) Count (w/ splice)
1 1
14 14
24 24
9 14
5 5
14 14
4 4
4 4
4 4
5 5
3 3
5 10
5 8
5 5
5 5
5 9
5 5
3 3
5 5
7 7
3 3
4 9
3 3
13 13
6 24
3 3
6 23
3 3
16 16
4 13
6 6
4 4
11 12
4 4
3 5
6 15
3 3


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Ankyrin repeat
IPR002110
Ankyrin repeat Repeat 83 (255) No
Ankyrin repeat-containing domain
IPR020683
Ankyrin repeat-containing domain Domain 87 (268) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR002110 IPR020683


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Species
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