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Family GP015869


Family ID GP015869  add to my list RDF
Family name Unknown function DUF810 family   suggest a name
Comment
Family Ontology
Close Hide
N/A
Curation status ?
Found in Viridiplantae
Phylogenetic analyzes Did not pass filtration




Clustering level Family ID (number of sequences)
1
Unknown function duf810 family (plant-specificity: 80%)
GP000943 (325)
2
Unknown function DUF810 family
GP015869 (325)
3 GP040519 (325)
4 GP069984 (325)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 325
Species Count (w/o splice) Count (w/ splice)
1 1
1 1
4 4
4 4
17 17
4 4
14 14
13 13
11 11
13 13
9 9
6 7
10 10
9 9
9 14
7 7
5 5
8 8
11 11
5 5
6 7
9 9
10 10
14 31
7 7
7 11
5 5
8 8
5 5
10 10
10 10
8 8
6 6
7 7
16 18
6 6


Information to display




(click on chart bars above to get species proteins)


Close InterPro family
IPR Annotation Type % Occurence Specificity
Protein of unknown function DUF810
IPR008528
Protein of unknown function DUF810 Family 92 (300) No

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Munc13 homology 1
IPR014770
Munc13 homology 1 Domain 76 (246) No
Mammalian uncoordinated homology 13, domain 2
IPR014772
Mammalian uncoordinated homology 13, domain 2 Domain 75 (244) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR014772 IPR014770 IPR008528


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Species
Information to display
?


(click on the button above to get your protein list)


Alignment not available.
[Masking step 1 details] [Masking step 2 details] [Filtration details] [Global HMM file]

Phylogeny tree not available.