Family GP016112


Family ID GP016112  add to my list RDF
Family name Ferric reduction oxidase family   suggest a name
Curation status ?
Found in No specificity
Phylogenetic analyzes Did not pass filtration




Clustering level Family ID (number of sequences)
1
Ferredoxin reductase-type FAD-binding superfamily (plant-specificity: 9%)
GP000286 (768)
2
Ferric reduction oxidase family
GP016112 (304)
3 GP040743 (222) , GP043839 (82)
4 GP070169 (222) , GP073348 (82)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 304
Species Count (w/o splice) Count (w/ splice)
1 1
4 4
12 12
9 10
8 8
10 10
5 5
8 8
6 6
4 4
5 5
3 6
4 4
4 4
4 4
2 2
3 3
9 9
7 7
10 10
7 7
10 11
8 8
10 10
7 12
6 6
13 34
8 8
9 9
6 8
14 14
10 10
15 15
7 7
6 6
9 10
7 7


Information to display




(click on chart bars above to get species proteins)


Close InterPro family
IPR Annotation Type % Occurence Specificity
Protein of unknown function DUF819
IPR008537
Protein of unknown function DUF819 Family 25 (75) Yes

Close Other InterPro signatures

No other significant IPR (i.e. > 25%)


Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
Ferric reductase transmembrane component-like domain
IPR013130
Ferric reductase, NAD binding
IPR013121
FAD-binding 8
IPR013112
Ferredoxin reductase-type FAD-binding domain
IPR017927



Build your own display:   ?

Species
Information to display
?


(click on the button above to get your protein list)


Alignment not available.
[Masking step 1 details] [Masking step 2 details] [Filtration details] [Global HMM file]

Phylogeny tree not available.