Family GP016009


Family ID GP016009  add to my list RDF
Family name BES1 transcription factor family   suggest a name
Comment DAFT and DRTF description
Family Ontology
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molecular_function
protein binding
GO:0005515 (1%) - protein binding
Curation status ?
Found in Embryophyta
Phylogenetic analyzes Did not pass filtration




Clustering level Family ID (number of sequences)
1
(plant-specificity: 19%)
GP000162 (839)
2
BES1 transcription factor family
GP016009 (281)
3 GP041452 (281)
4 GP071081 (186) , GP072037 (91) , GP093785 (3) , GP147529 (3)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 281
Species Count (w/o splice) Count (w/ splice)
6 7
5 5
12 12
5 5
10 10
9 9
15 15
6 6
6 6
5 5
4 4
9 9
9 10
7 7
6 6
7 7
7 7
6 6
6 11
6 6
7 7
8 16
5 5
11 20
5 5
11 11
4 5
20 20
3 3
6 7
5 5
5 5
12 15
4 4


Information to display




(click on chart bars above to get species proteins)


Close InterPro family
IPR Annotation Type % Occurence Specificity
BZR1, transcriptional repressor
IPR008540
BZR1, transcriptional repressor Family 93 (262) No

Close Other InterPro signatures

No other significant IPR (i.e. > 25%)


Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR008540


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Species
Information to display
?


(click on the button above to get your protein list)


Alignment not available.
[Masking step 1 details] [Masking step 2 details] [Filtration details] [Global HMM file]

Phylogeny tree not available.