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Family GP016048


Family ID GP016048  add to my list RDF
Family name Ribosomal protein S4e   suggest a name
Family Ontology
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N/A
Curation status ?
Found in No specificity
Phylogenetic analyzes Phylogeny done




Clustering level Family ID (number of sequences)
1
Ribosomal protein S4a/S4e family (plant-specificity: 30%)
GP001071 (377)
2
Ribosomal protein S4e
GP016048 (250)
3 GP040711 (250)
4 GP070140 (247)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 250
Species Count (w/o splice) Count (w/ splice)
1 1
1 1
21 21
7 10
1 1
6 6
1 1
5 5
6 6
4 4
5 5
3 3
1 1
3 3
2 2
40 54
5 5
5 5
2 2
7 7
3 3
3 5
2 2
11 11
9 20
2 2
7 9
2 2
9 9
3 4
13 13
3 3
4 4
3 3
4 5
9 9
3 3


Information to display




(click on chart bars above to get species proteins)


Close InterPro family
IPR Annotation Type % Occurence Specificity
Ribosomal protein S4e
IPR000876
Ribosomal protein S4e Family 48 (120) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Ribosomal protein S4e, central region
IPR013845
Ribosomal protein S4e, central region Domain 78 (194) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
KOW
IPR005824 IPR000876 IPR013845
Ribosomal protein S4e, N-terminal, conserved site
IPR018199
Ribosomal protein S4e, N-terminal
IPR013843



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Species
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