Family GP016085


Family ID GP016085  add to my list RDF
Family name Pyrophosphate-dependent phosphofructokinase, PfpB type family   suggest a name
Synonym(s) Pyrophosphate fructose 6 phosphate 1 phosphotransferase
Cross-reference(s) PMID:
Structure of the genes encoding the alpha- and beta-subunits of castor pyrophosphate-dependent phosphofructokinase.
7835697
Family Ontology
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molecular_function
6-phosphofructokinase activity
GO:0003872 (44%) - 6-phosphofructokinase activity
diphosphate-fructose-6-phosphate 1-phosphotransferase activity
GO:0047334 (66%) - diphosphate-fructose-6-phosphate 1-phosphotransferase activity
biological_process
fructose 6-phosphate metabolic process
GO:0006002 (44%) - fructose 6-phosphate metabolic process
Curation status ?
Found in No specificity
Phylogenetic analyzes Did not pass filtration




Clustering level Family ID (number of sequences)
1
Phosphofructokinase family (plant-specificity: 9%)
GP000187 (705)
2
Pyrophosphate-dependent phosphofructokinase, PfpB type family
GP016085 (249)
3 GP040717 (242) , GP122842 (7)
4 GP071159 (132) , GP072053 (110) , GP137003 (7)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 249
Species Count (w/o splice) Count (w/ splice)
1 1
6 6
2 2
13 13
3 3
10 10
9 9
8 8
8 8
5 11
6 6
4 4
6 6
13 17
6 8
3 3
4 4
5 5
4 4
5 5
2 2
9 9
5 22
4 4
8 16
2 2
6 6
4 5
13 13
10 10
3 3
3 3
5 5
12 13
3 3


Information to display




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Close InterPro family
IPR Annotation Type % Occurence Specificity
Pyrophosphate-dependent phosphofructokinase PfpB
IPR011183
Pyrophosphate-dependent phosphofructokinase PfpB Family 57 (141) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Phosphofructokinase domain
IPR000023
Phosphofructokinase domain Domain 88 (218) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR000023
Pyrophosphate-dependent phosphofructokinase, alpha-helical
IPR013981 IPR011183



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Species
Information to display
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Alignment not available.
[Masking step 1 details] [Masking step 2 details] [Filtration details] [Global HMM file]

Phylogeny tree not available.