Family GP016466


Family ID GP016466  add to my list RDF
Family name Unannotated cluster   suggest a name
Family Ontology
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molecular_function
ammonium transmembrane transporter activity
GO:0008519 (88%) - ammonium transmembrane transporter activity
biological_process
ammonium transport
GO:0015696 (88%) - ammonium transport
ammonium transmembrane transport
GO:0072488 (72%) - ammonium transmembrane transport
Curation status ?
Found in No specificity
Phylogenetic analyzes Phylogeny done




Clustering level Family ID (number of sequences)
1
Ammonium transporter subfamily (plant-specificity: 19%)
GP000388 (601)
2 GP016466 (207)
3 GP041088 (207)
4 GP070102 (205)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 207
Species Count (w/o splice) Count (w/ splice)
2 2
10 10
35 35
7 7
1 1
7 7
3 3
5 5
5 5
11 11
2 2
4 4
2 2
2 2
2 2
3 3
2 2
4 4
3 3
3 3
2 2
5 5
3 3
5 5
6 7
7 7
11 11
5 5
6 6
5 5
9 9
5 5
5 6
4 4
4 4
7 7
3 3


Information to display




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Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Ammonium transporter, conserved site
IPR018047
Ammonium transporter, conserved site Conserved_site 72 (150) No
Ammonium transporter AmtB-like domain
IPR024041
Ammonium transporter AmtB-like domain Domain 88 (183) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR024041 IPR018047
Ammonium transporter
IPR001905



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