Family GP016692


Family ID GP016692  add to my list RDF
Family name Unannotated cluster   suggest a name
Family Ontology
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molecular_function
protein binding
GO:0005515 (1%) - protein binding
heat shock protein binding
GO:0031072 (1%) - heat shock protein binding
Curation status ?
Found in Embryophyta
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
Signal transduction superfamily (plant-specificity: 60%)
GP000129 (2217)
2 GP016692 (198)
3 GP043033 (198)
4 GP073045 (116) , GP072719 (82)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 198
Species Count (w/o splice) Count (w/ splice)
2 2
3 3
5 5
2 2
7 7
6 6
4 4
4 4
3 4
2 4
3 3
2 2
2 5
2 2
2 2
4 4
5 5
2 2
3 9
2 2
11 11
6 15
2 2
5 36
2 2
6 6
3 7
4 4
4 4
5 6
5 5
6 7
8 12
4 4


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
SANT/Myb domain
IPR001005
SANT/Myb domain Domain 85 (169) No
Myb domain, plants
IPR006447
Myb domain, plants Domain 88 (175) No
Myb domain
IPR017930
Myb domain Domain 85 (168) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR001005 IPR006447 IPR017930


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Species
Information to display
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