Family GP000127


Family ID GP000127  add to my list RDF
Family name O-methyltransferase, eukaryotic comt type family   suggest a name
Synonym(s) O-methyltransferase family 2
Cross-reference(s) PMID:
Flavonoid 3'-O-methyltransferase from rice: cDNA cloning, characterization and functional expression.
16412485 PMID:
Characterization of bispecific caffeic acid/5-hydroxyferulic acid O-methyltransferase from aspen.
1368360 PMID:
Crystal structure of aclacinomycin-10-hydroxylase, a S-adenosyl-L-methionine-dependent methyltransferase homolog involved in anthracycline biosynthesis in Streptomyces purpurascens.
14607118 PMID:
Structural basis for the modulation of lignin monomer methylation by caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase.
12084826 PMID:
Structures of two natural product methyltransferases reveal the basis for substrate specificity in plant O-methyltransferases.
11224575
Family Ontology
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N/A
Curation status ?
Found in No specificity
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
O-methyltransferase, eukaryotic comt type family
GP000127 (1410)
2
Acetylserotonin N-methyltransferase subfamily
GP015218 (1390) ,
(plant-specificity: 77%)
GP110755 (12) ,
(plant-specificity: 87%)
GP111422 (12) , GP116301 (3)
3 GP039960 (732) , GP039918 (658) ,
(plant-specificity: 77%)
GP120883 (12) ,
(plant-specificity: 87%)
GP121147 (12) , GP129066 (3)
4 GP069470 (729) , GP069429 (658) ,
(plant-specificity: 95%)
GP134815 (11) ,
(plant-specificity: 85%)
GP137212 (7) , GP145699 (3)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 1410
Species Count (w/o splice) Count (w/ splice)
1 1
3 3
4 5
23 23
84 84
20 20
46 46
38 38
24 24
13 13
43 45
22 23
35 35
55 55
30 32
47 47
55 55
43 43
25 25
43 43
17 20
11 11
75 75
49 65
29 29
42 54
46 46
38 38
16 18
96 96
39 39
68 72
27 27
39 40
58 67
53 53


Information to display




(click on chart bars above to get species proteins)


Close InterPro family
IPR Annotation Type % Occurence Specificity
Caffeate O-methyltransferase (COMT) family
IPR016461
Caffeate O-methyltransferase (COMT) family Family 55 (772) No

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
O-methyltransferase, family 2
IPR001077
O-methyltransferase, family 2 Domain 88 (1236) No
Winged helix-turn-helix DNA-binding domain
IPR011991
Winged helix-turn-helix DNA-binding domain Domain 74 (1040) No
Plant methyltransferase dimerisation
IPR012967
Plant methyltransferase dimerisation Domain 69 (976) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR011991 IPR016461 IPR012967 IPR001077


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Species
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