Family GP016771


Family ID GP016771  add to my list RDF
Family name Unannotated cluster   suggest a name
Family Ontology
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molecular_function
glucosylceramidase activity
GO:0004348 (61%) - glucosylceramidase activity
biological_process
glucosylceramide catabolic process
GO:0006680 (61%) - glucosylceramide catabolic process
Curation status ?
Found in Embryophyta
Phylogenetic analyzes Did not pass filtration




Clustering level Family ID (number of sequences)
1
Beta-glucosidase gba2 type family
GP001577 (178)
2 GP016771 (178)
3 GP041400 (178)
4 GP070785 (178)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 178
Species Count (w/o splice) Count (w/ splice)
2 2
2 2
10 10
2 2
8 8
6 6
9 9
5 5
4 6
5 5
7 7
6 6
4 7
5 6
5 5
4 4
3 3
4 4
4 6
6 6
3 3
4 13
3 3
5 15
3 3
5 5
3 5
6 6
3 3
3 3
2 2
2 2
3 3
3 3


Information to display




(click on chart bars above to get species proteins)


Close InterPro family
IPR Annotation Type % Occurence Specificity
Beta-glucosidase, GBA2 type
IPR014551
Beta-glucosidase, GBA2 type Family 61 (108) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Glucosylceramidase
IPR006775
Glucosylceramidase Domain 80 (142) No
Six-hairpin glycosidase-like
IPR008928
Six-hairpin glycosidase-like Domain 76 (135) No
Beta-glucosidase, GBA2 type, N-terminal
IPR024462
Beta-glucosidase, GBA2 type, N-terminal Domain 78 (138) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR008928 IPR024462
Six-hairpin glycosidase
IPR012341 IPR006775 IPR014551



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Species
Information to display
?


(click on the button above to get your protein list)


Alignment not available.
[Masking step 1 details] [Masking step 2 details] [Filtration details] [Global HMM file]

Phylogeny tree not available.