Family GP017396


Family ID GP017396  add to my list RDF
Family name Pectinesterase inhibitor family 1   suggest a name
Family Ontology
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molecular_function
pectinesterase activity
GO:0030599 (96%) - pectinesterase activity
Curation status ?
Found in Magnoliophyta
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
Pectinesterase inhibitor superfamily (plant-specificity: 100%)
GP000509 (854)
2
Pectinesterase inhibitor family 1
GP017396 (174)
3 GP042839 (148) ,
(plant-specificity: 100%)
GP049893 (17) ,
(plant-specificity: 100%)
GP053153 (6) , GP054527 (4)
4 GP074034 (110) ,
(plant-specificity: 100%)
GP080268 (17) ,
(plant-specificity: 100%)
GP080188 (15) ,
(plant-specificity: 100%)
GP137834 (6) ,
(plant-specificity: 100%)
GP082748 (6) ,
(plant-specificity: 100%)
GP084438 (6) , GP141502 (4) , GP086215 (4) , GP088507 (3)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 174
Species Count (w/o splice) Count (w/ splice)
2 2
4 4
13 13
9 9
7 7
6 6
6 6
9 9
6 6
7 9
7 7
2 2
7 7
3 3
9 9
4 4
2 2
9 9
4 4
5 5
4 4
8 8
7 7
8 8
1 1
2 2
2 2
6 6
8 8
5 5


Information to display




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Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Pectinesterase inhibitor domain
IPR006501
Pectinesterase inhibitor domain Domain 96 (167) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR006501


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Species
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