Family GP000120


Family ID GP000120  add to my list RDF
Family name C2C2-DOF transcription factor family   suggest a name
Comment DAFT and DRTF description
Family Ontology
Close Hide
N/A
Curation status ?
Found in Viridiplantae plant-specific
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
C2C2-DOF transcription factor family (plant-specificity: 100%)
GP000120 (1381)
2 GP015133 (1378) , GP027726 (3)
3 GP039849 (1366) ,
(plant-specificity: 100%)
GP122226 (10) , GP054490 (3)
4 GP069869 (687) ,
(plant-specificity: 100%)
GP082993 (429) , GP071170 (231) ,
(plant-specificity: 100%)
GP135068 (10) ,
(plant-specificity: 100%)
GP099352 (8) ,
(plant-specificity: 100%)
GP136783 (7) , GP086149 (3)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 1381
Species Count (w/o splice) Count (w/ splice)
2 2
7 7
19 31
29 29
24 24
18 18
74 74
73 73
40 40
28 28
32 39
27 27
30 30
32 32
46 52
29 29
29 29
36 36
34 34
22 22
36 47
21 21
28 28
60 81
24 24
45 62
24 24
48 48
36 38
61 61
29 29
43 43
37 37
42 45
80 94
43 43


Information to display




(click on chart bars above to get species proteins)


Close InterPro family
IPR Annotation Type % Occurence Specificity
Zinc finger, Dof-type
IPR003851
Zinc finger, Dof-type Family 92 (1269) No
Menin
IPR007747
Menin Family 1 (2) Yes

Close Other InterPro signatures

No other significant IPR (i.e. > 25%)


Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR003851


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Species
Information to display
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(click on the button above to get your protein list)