Family GP016740


Family ID GP016740  add to my list RDF
Family name Unknown function DUF760 family   suggest a name
Comment
Curation status ?
Found in Viridiplantae
Phylogenetic analyzes Phylogeny done




Clustering level Family ID (number of sequences)
1
Unknown function duf760 family (plant-specificity: 100%)
GP001380 (207)
2
Unknown function DUF760 family
GP016740 (172)
3 GP041372 (172)
4 GP070760 (170)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 172
Species Count (w/o splice) Count (w/ splice)
1 1
3 3
2 2
3 3
3 3
3 3
3 3
5 5
3 3
3 4
3 3
3 3
3 3
4 6
2 3
3 3
6 6
6 6
3 3
5 8
3 3
15 15
4 5
3 3
5 10
3 3
5 5
3 4
6 6
7 7
5 5
5 5
6 6
10 16
5 5


Information to display




(click on chart bars above to get species proteins)


Close InterPro family
IPR Annotation Type % Occurence Specificity
Protein of unknown function DUF760
IPR008479
Protein of unknown function DUF760 Family 88 (151) No

Close Other InterPro signatures

No other significant IPR (i.e. > 25%)


Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR008479


Build your own display:   ?

Species
Information to display
?


(click on the button above to get your protein list)





[Masking step 1 details] [Masking step 2 details] [Filtration details] [Global HMM file]

You can filter species displayed in the phylogenomic tree by checking the species you want:
Species