Family GP016745


Family ID GP016745  add to my list RDF
Family name K Homology with Zinc finger C3H domain containg family   suggest a name
Family Ontology
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biological_process
peptide transport
GO:0015833 (1%) - peptide transport
Curation status ?
Found in Viridiplantae
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
(plant-specificity: 40%)
GP001327 (514)
2
K Homology with Zinc finger C3H domain containg family
GP016745 (151)
3 GP041377 (151)
4 GP070764 (151)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 151
Species Count (w/o splice) Count (w/ splice)
1 1
2 2
2 3
1 1
6 6
3 3
2 2
2 2
3 3
3 3
3 6
5 5
2 2
3 3
8 16
3 5
5 5
5 5
6 6
3 3
2 2
2 2
6 6
3 6
2 2
5 8
2 2
4 4
3 6
8 8
2 2
3 3
3 3
3 6
6 7
2 2


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Zinc finger, CCCH-type
IPR000571
Zinc finger, CCCH-type Domain 93 (141) No
K Homology domain
IPR004087
K Homology domain Domain 89 (134) No
K Homology domain, type 1
IPR004088
K Homology domain, type 1 Domain 89 (135) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR000571 IPR004088 IPR004087


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Species
Information to display
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(click on the button above to get your protein list)