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Family GP001395


Family ID GP001395  add to my list RDF
Family name phosphoesterase at2g46880 family   suggest a name
Synonym(s) Inactive purple acid phosphatase
Cross-reference(s) PMID:
Mechanism of Fe(III)-Zn(II) purple acid phosphatase based on crystal structures.
8683579
Curation status ?
Found in Viridiplantae
Phylogenetic analyzes Phylogeny done




Clustering level Family ID (number of sequences)
1
phosphoesterase at2g46880 family (plant-specificity: 19%)
GP001395 (181)
2 GP017092 (123) ,
(plant-specificity: 33%)
GP021782 (58)
3 GP041730 (123) ,
(plant-specificity: 33%)
GP047101 (58)
4 GP071173 (123) ,
(plant-specificity: 33%)
GP076924 (58)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
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    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 181
Species Count (w/o splice) Count (w/ splice)
1 1
4 4
2 2
4 4
4 4
3 3
3 3
3 3
6 6
3 4
4 5
5 5
4 4
5 7
3 3
3 3
2 2
3 3
8 8
4 5
3 3
8 8
4 10
4 4
6 9
3 3
5 5
3 7
7 7
11 11
7 7
5 5
4 4
8 14
5 5


Information to display




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Close InterPro family
IPR Annotation Type % Occurence Specificity
Phosphoesterase At2g46880
IPR011230
Phosphoesterase At2g46880 Family 75 (135) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Phosphoesterase domain
IPR004843
Phosphoesterase domain Domain 83 (151) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR004843 IPR011230


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Species
Information to display
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[Masking step 1 details] [Masking step 2 details] [Filtration details] [Global HMM file]

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Alignment and filtration statistics:

Overall family sequences Sequences used for alignment (w/o splice) Sequences kept after filtration [min; median; max] ~average sequence length Alignment length Masked alignment length
181 157 (87%) 135 (75%) [68; 386; 1305] ~355 2136 255




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