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Family GP018476


Family ID GP018476  add to my list RDF
Family name AMP-dependent synthetase/ligase with catalase, N-terminal domain group   suggest a name
Family Ontology
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molecular_function
phosphopantetheine binding
GO:0031177 (19%) - phosphopantetheine binding
Curation status ?
Found in Tracheophyta
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
AMP-dependent synthetase/ligase superfamily
GP000118 (2082)
2
AMP-dependent synthetase/ligase with catalase, N-terminal domain group
GP018476 (89)
3 GP047042 (52) ,
(plant-specificity: 11%)
GP047601 (37)
4 GP076855 (52) ,
(plant-specificity: 11%)
GP077474 (37)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 89
Species Count (w/o splice) Count (w/ splice)
3 3
3 3
2 2
2 2
2 2
2 2
4 4
2 2
1 1
3 3
3 3
3 3
5 5
2 2
3 3
2 2
1 1
2 2
2 2
2 2
3 3
2 2
2 2
2 2
5 5
5 5
5 5
4 4
3 3
6 6
3 3


Information to display




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Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
AMP-dependent synthetase/ligase
IPR000873
AMP-dependent synthetase/ligase Domain 83 (74) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
Trimeric LpxA-like
IPR011004 IPR000873



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Species
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