Family GP000136


Family ID GP000136  add to my list RDF
Family name AP2-like ethylene-responsive transcription factor family   suggest a name
Family Ontology
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N/A
Curation status ?
Found in Viridiplantae
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
AP2-like ethylene-responsive transcription factor family (plant-specificity: 85%)
GP000136 (1228)
2
AP2 subfamily
GP015167 (1226)
3
AP2-like factor, ANT lineage group
GP039887 (1221) , GP128995 (3)
4 GP069408 (866) , GP069865 (352) , GP144039 (3) , GP145610 (3)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 1228
Species Count (w/o splice) Count (w/ splice)
17 17
27 27
13 13
11 11
31 31
15 15
54 54
50 50
43 43
36 36
31 40
24 28
16 16
30 30
31 72
24 26
20 20
27 27
24 24
21 21
18 31
20 20
35 35
32 78
24 24
33 61
20 20
30 30
19 28
61 61
30 30
41 41
26 26
30 34
52 80
28 28


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
AP2/ERF domain
IPR001471
AP2/ERF domain Domain 90 (1103) No
DNA-binding domain
IPR016177
DNA-binding domain Domain 88 (1082) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR001471 IPR016177


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Species
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