Family GP022154


Family ID GP022154  add to my list RDF
Family name Unannotated cluster   suggest a name
Curation status ?
Found in No specificity
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
Snf5/smarcb1/ini1 family (plant-specificity: 30%)
GP004645 (69)
2
(plant-specificity: 30%)
GP022154 (69)
3
(plant-specificity: 30%)
GP047329 (69)
4
(plant-specificity: 30%)
GP077170 (69)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 69
Species Count (w/o splice) Count (w/ splice)
1 1
1 1
1 1
1 1
1 1
2 2
1 1
1 1
1 1
1 1
1 2
1 1
1 1
1 1
1 1
1 1
1 1
3 3
1 1
1 2
2 2
4 4
2 17
1 1
1 5
1 1
1 1
1 1
1 1
3 3
1 1
1 1
1 1
3 4
1 1


Information to display




(click on chart bars above to get species proteins)


Close InterPro family
IPR Annotation Type % Occurence Specificity
SNF5/SMARCB1/INI1
IPR006939
SNF5/SMARCB1/INI1 Family 96 (66) Yes

Close Other InterPro signatures

No other significant IPR (i.e. > 25%)


Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR006939


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Species
Information to display
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(click on the button above to get your protein list)