Family GP019923


Family ID GP019923  add to my list RDF
Family name Unannotated cluster   suggest a name
Curation status ?
Found in No specificity
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
Transcription initiation factor iid, 18 kda subunit family
GP003415 (69)
2
(plant-specificity: 9%)
GP019923 (69)
3 GP044854 (67)
4 GP074467 (67)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 69
Species Count (w/o splice) Count (w/ splice)
1 1
2 2
6 6
2 2
1 1
1 1
1 1
1 1
1 1
1 1
1 1
1 1
1 1
1 1
2 2
1 1
1 1
1 1
2 2
1 1
1 1
1 1
5 5
2 2
1 1
1 1
1 1
1 1
1 6
1 1
1 1
2 2
2 2
1 1
3 8
6 6


Information to display




(click on chart bars above to get species proteins)


Close InterPro family
IPR Annotation Type % Occurence Specificity
Transcription initiation factor IID, 18kDa subunit
IPR003195
Transcription initiation factor IID, 18kDa subunit Family 90 (62) No

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Histone-fold
IPR009072
Histone-fold Domain 91 (63) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR009072 IPR003195


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Species
Information to display
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(click on the button above to get your protein list)