Family GP001860


Family ID GP001860  add to my list RDF
Family name Peptidase m17, leucyl aminopeptidase family   suggest a name
Family Ontology
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molecular_function
metalloexopeptidase activity
GO:0008235 (76%) - metalloexopeptidase activity
Curation status ?
Found in No specificity
Phylogenetic analyzes Did not pass filtration




Clustering level Family ID (number of sequences)
1
Peptidase m17, leucyl aminopeptidase family
GP001860 (161)
2 GP017321 (161)
3 GP041991 (146) , GP121112 (15)
4 GP071392 (146) , GP133807 (15)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 161
Species Count (w/o splice) Count (w/ splice)
2 2
2 2
24 24
2 3
3 3
14 14
1 1
2 2
2 2
2 2
3 3
2 2
2 2
2 2
2 2
7 13
3 3
2 2
3 3
4 4
2 2
3 5
2 2
1 1
4 18
1 1
2 7
2 2
2 2
4 4
8 8
5 5
3 3
2 2
2 2
4 4
2 2


Information to display




(click on chart bars above to get species proteins)


Close InterPro family
IPR Annotation Type % Occurence Specificity
Leucine aminopeptidase/peptidase B
IPR011356
Leucine aminopeptidase/peptidase B Family 76 (123) No
Peptidase M17, leucine aminopeptidase
IPR023042
Peptidase M17, leucine aminopeptidase Family 43 (70) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Peptidase M17, leucyl aminopeptidase, C-terminal
IPR000819
Peptidase M17, leucyl aminopeptidase, C-terminal Domain 86 (139) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR000819
Peptidase M17, leucyl aminopeptidase, N-terminal
IPR008283 IPR023042 IPR011356



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Species
Information to display
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Alignment not available.
[Masking step 1 details] [Masking step 2 details] [Filtration details] [Global HMM file]

Phylogeny tree not available.


Alignment and filtration statistics:

Overall family sequences Sequences used for alignment (w/o splice) Sequences kept after filtration [min; median; max] ~average sequence length Alignment length Masked alignment length
161 133 (83%) 99 (61%) [35; 497; 762] ~429 1633 478