Family GP020184


Family ID GP020184  add to my list RDF
Family name Unannotated cluster   suggest a name
Curation status ?
Found in Spermatophyta plant-specific
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
LURP-one-related (LOR) family (plant-specificity: 99%)
GP000174 (735)
2
(plant-specificity: 100%)
GP020184 (61)
3
(plant-specificity: 100%)
GP045139 (61)
4 GP074770 (61)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 61
Species Count (w/o splice) Count (w/ splice)
5 5
1 1
2 2
1 1
2 2
3 3
2 3
2 2
2 2
3 3
3 4
2 2
1 1
1 1
1 1
1 1
2 2
1 1
2 2
1 1
1 1
1 1
1 1
1 1
1 1
3 3
1 1
1 1
1 1
3 3
4 5
2 2


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
LURP1-like domain
IPR007612
LURP1-like domain Domain 97 (59) No
Tubby C-terminal-like domain
IPR025659
Tubby C-terminal-like domain Domain 98 (60) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR025659 IPR007612


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Species
Information to display
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(click on the button above to get your protein list)