Family GP109621


Family ID GP109621  add to my list RDF
Family name Unannotated cluster   suggest a name
Family Ontology
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molecular_function
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
GO:0008766 (59%) - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
Curation status ?
Found in Embryophyta
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
MYB family transcription factor Group3 SHAQKYF (plant-specificity: 30%)
GP000128 (1885)
2 GP109621 (29)
3 GP119408 (29)
4 GP132793 (29)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 29
Species Count (w/o splice) Count (w/ splice)
2 2
1 1
3 3
1 1
1 1
1 1
1 1
1 1
4 4
8 8
2 2
1 1
1 1
2 2


Information to display




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Close InterPro family
IPR Annotation Type % Occurence Specificity
UDP-MurNAc-pentapeptide synthetase
IPR005863
UDP-MurNAc-pentapeptide synthetase Family 59 (17) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Mur ligase, C-terminal
IPR004101
Mur ligase, C-terminal Domain 79 (23) No
Mur ligase, central
IPR013221
Mur ligase, central Domain 90 (26) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR013221 IPR004101 IPR005863


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Species
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