Family GP001436


Family ID GP001436  add to my list RDF
Family name Alpha/beta hydrolase fold-1 domain containing group   suggest a name
Curation status ?
Found in No specificity
Phylogenetic analyzes Phylogeny done




Clustering level Family ID (number of sequences)
1
Alpha/beta hydrolase fold-1 domain containing group
GP001436 (116)
2 GP017185 (116)
3 GP043780 (58) , GP044569 (58)
4 GP074348 (58) , GP074146 (58)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 116
Species Count (w/o splice) Count (w/ splice)
1 1
3 3
7 7
2 3
2 2
2 2
2 2
2 2
2 2
3 3
3 3
2 3
2 3
2 2
2 2
2 7
2 2
2 2
1 1
2 2
2 2
2 2
2 2
2 2
2 8
4 4
5 6
3 3
4 4
2 3
8 8
3 3
2 2
2 2
2 2
4 7
2 2


Information to display




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Close InterPro family

No IPR family


Close Other InterPro signatures

No other significant IPR (i.e. > 25%)


Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema



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Species
Information to display
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[Masking step 1 details] [Masking step 2 details] [Filtration details] [Global HMM file]

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Alignment and filtration statistics:

Overall family sequences Sequences used for alignment (w/o splice) Sequences kept after filtration [min; median; max] ~average sequence length Alignment length Masked alignment length
116 97 (84%) 83 (72%) [76; 329; 598] ~306 1639 235




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