Family GP112140


Family ID GP112140  add to my list RDF
Family name Unannotated cluster   suggest a name
Curation status ?
Found in Zea mays plant-specific
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
(plant-specificity: 30%)
GP000057 (2412) ,
Cellulose synthase family (plant-specificity: 40%)
GP000073 (1637) ,
Malate dehydrogenase family (plant-specificity: 9%)
GP000552 (497) ,
Thylakoid membrane phosphoprotein family (plant-specificity: 9%)
GP000890 (434) ,
(plant-specificity: 100%)
GP002960 (65)
2
(plant-specificity: 100%)
GP112140 (6)
3
(plant-specificity: 100%)
GP049615 (6)
4
(plant-specificity: 100%)
GP079895 (6)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 6
Species Count (w/o splice) Count (w/ splice)
5 6


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures

No other significant IPR (i.e. > 25%)


Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema



Build your own display:   ?

Species
Information to display
?


(click on the button above to get your protein list)